Takifugu flavidus (sansaifugu): 130523228
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Entry
130523228 CDS
T09160
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04217
Necroptosis
tfs04622
RIG-I-like receptor signaling pathway
tfs04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130523228 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130523228 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
130523228 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfs01002
]
130523228 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130523228 (si:cabz01101003.1)
Enzymes [BR:
tfs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130523228 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
tfs01002
]
Cysteine peptidases
Family C67
130523228 (si:cabz01101003.1)
Ubiquitin system [BR:
tfs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130523228 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
EAD8
Motif
Other DBs
NCBI-GeneID:
130523228
NCBI-ProteinID:
XP_056884288
LinkDB
All DBs
Position
3:complement(6323566..6328948)
Genome browser
AA seq
969 aa
AA seq
DB search
MSSAPEVNRKRRPPKMYLISTDLKVQDHLDGTIRLQRGFMCQEQDKSSNEFLWVKVLDND
IVLKIERKFLHEIPAELSGLLEPVSDPEARLKLLNNPAKLLQLANLPLDSPLWVQIGKQD
ELAEAELKYIGPLTRGSSAVIFGVRLKGSAAGRGTSNGSYKGHRLFTCPEGCAVFLPVSH
ISLRRWSRGSGSDAQERAREKEHHRSGNNVNVNGHHFNNARLSHHQQQPSRHVVFKQHRP
SSPPPQQATGIIPRTVDSVPQGQSHVRNSTSPPPFHIGQRVCFPLNDSVYGGEVCFCGLL
PGKSSSGMYVGVLLDSPFGNWDGFYKGEKLCQIPSPQYGRLEHINKVSPEPKSRRHNPLH
QIKQPILKPVIPPTTKPPPMSPPASTSKIALMPPTKQALNIPPLPPPKPSVKPLPPVPPP
KPSSPMLPSDPEPLQDTNGLQDLPSPLRSPDDTDAVFDDGGGELEVGSMVEVNDPPLFGV
IRWIGRIGGIPEQVAGIELDQEISAGTDGSYLGERHFRCPANKGLFVKLRNCRRDSRFPA
PEAPVNQVERCNSVAFAEWGSERVDEHTAPLEGDEASELYQGWKRGIQGHLNSCYLDATL
FSMFSCCSSADWVLFWPTDDETEQNSKQAQDLLRCEIVNPLRRYGYVCASKTMALRRLLE
AANQDMGFTNKEKDPEEFLNKLFQLLRVEPLLKIRSMTHQPQECHLYQLFPPTLPSSPSS
PSSPSPVHSPIPLAFPSSSRMRVASVQKLMESSFLHSGLKLVEAPSCLLLLMPRFGKDFK
MFDAILPTLSLDLTDLLDDTLRQCSICQNVAEWECSQCYEDMDITPGHLKQYCQTCNTQV
HSHRKRVSHSPVKVSIPEGTWTGSLHSARQKMSLFAVTCIETSHYVSFVKHGPLITDWLF
FDSMADREGGENGFNIPHVKACPEVGRYLSLTEEELSRVDTASLREPVRRLLCDSYMCLY
HSPELSLYK
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcgcccccgaggtaaacaggaagcgtcgcccccccaaaatgtacttgatctcg
accgatctgaaggtccaggaccacctggacggtaccattcgtctgcagcgggggttcatg
tgccaggaacaggacaagagcagcaacgaattcctttgggttaaggtgttggataatgac
attgtgttaaaaatagagaggaagtttctacatgaaatcccagctgaactcagtggattg
ttggagccagtgtctgatccagaggctcgcctaaagcttctaaacaatcctgcaaagctg
ctgcagctggctaatttgcctctcgattccccgctatgggtgcaaattgggaaacaggac
gagctggcagaggcagagctgaagtacattggtcctctgaccagagggagcagtgctgtg
atttttggggtccgacttaagggttcagcggcaggtaggggaacaagcaacggctcctac
aaagggcatcgactcttcacctgtcctgaaggatgtgccgtcttcctgccggtgagtcac
ataagcctccgtcgctggtcccgcggcagcggctccgatgcacaggagcgagcacgtgag
aaggagcaccaccggagcggcaacaacgttaacgtcaacggccaccatttcaacaacgcc
cgcctcagtcatcaccagcagcagccgagtcgtcacgtcgttttcaagcagcatcgcccc
agcagcccccctccgcagcaggcgacaggcatcatacctcgaacggtggattctgtgcct
caaggccagagccacgtccgaaattccacatcgcctccgcctttccacattggccagcgg
gtttgtttccctctgaatgacagtgtgtatgggggagaggtttgcttctgtggcctccta
cctggcaagtcctcatccggaatgtatgtcggagtcctactggactctccttttggtaat
tgggatgggttttataagggagagaaactctgccagattccttcccctcagtatggacgt
cttgagcatatcaacaaggtgtcccctgagcctaaaagtcgtcgccacaatcctcttcac
caaattaagcaacccatcctgaagcctgtcatacctcccaccactaaaccaccccctatg
tccccgcctgcctccacttccaagatagccctcatgcccccgaccaaacaagcgctgaat
atacctcctttgccgcccccaaaaccctccgtgaagccgctgccgcctgtccctcctccc
aagccctccagcccaatgctcccctcagaccccgagccgctccaggacaccaacggcctg
caggacttgccttcgccgctgaggtcgccggacgacaccgatgctgtatttgatgatgga
ggcggtgagctggaggtgggatcgatggtggaggtgaacgacccgccacttttcggagtt
atccgctggattggtcggatcggtgggattccggagcaagttgcgggaattgagctggac
caggaaatttctgctgggacagacggcagttacctcggtgaacgtcatttccgctgcccg
gccaacaaagggctgtttgtcaagcttcgcaactgcagaagagattcccggtttcctgcc
ccggaggcccctgtcaatcaagtggaaagatgcaactctgtagcgtttgcagagtggggc
agcgagagggtagatgaacacactgccccactggaaggggatgaagccagtgagctgtac
cagggctggaagcggggcatccagggtcacctgaactcctgctacctggatgctacactg
tttagcatgttctcctgctgcagttcagcagactgggtgttgttctggcccactgacgat
gagacggagcagaactctaaacaggctcaggatctgctgcgttgcgagatcgtcaacccc
ctgcgaaggtacggttacgtgtgtgccagtaagaccatggccctgagacgactgctggaa
gcagcaaaccaggacatgggcttcaccaataaggagaaagatcctgaagagttcctcaac
aagcttttccagctccttcgggtcgagcctctcctcaagataaggtcgatgactcatcag
cctcaagagtgtcacctctaccagctcttcccgcccactcttccgtcctcaccttcatca
ccatcctccccctcccccgtccactcccccattccactggcattcccgtcatcaagccga
atgagagtcgccagcgtccaaaagctgatggagtcatctttcctccactccggcctcaag
ttagtcgaggctccgtcctgcctgttgctgctcatgcctcgatttggaaaagacttcaaa
atgtttgacgccatcctgcccactctcagtctggaccttacagacctgttggatgacacc
ctgagacagtgcagcatctgtcagaatgtggctgagtgggagtgttctcagtgttatgaa
gacatggacatcactccaggtcatctcaaacagtattgccagacttgtaacacacaggtc
cacagtcacaggaagcgagtgtcccacagtccagtgaaggtgtccatcccagaggggaca
tggaccggctctcttcactctgcccgccagaaaatgtctctcttcgctgtgacgtgcatc
gagaccagccattacgtaagcttcgtgaagcacgggccgctcatcactgactggctgttc
tttgacagcatggccgatcgagaagggggtgagaacggctttaatatcccccatgtgaag
gcgtgtcccgaggtgggccgatacctcagtctcacggaggaagagctgagcagagtcgac
acagcatccttacgggagcccgtccgccgcctgctgtgtgactcctacatgtgtctctac
cacagccctgagctcagcctatataagtga
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