Takifugu flavidus (sansaifugu): 130523334
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Entry
130523334 CDS
T09160
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03013
Nucleocytoplasmic transport
tfs03015
mRNA surveillance pathway
tfs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130523334 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
130523334 (acin1b)
03015 mRNA surveillance pathway
130523334 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130523334 (acin1b)
03041 Spliceosome [BR:
tfs03041
]
130523334 (acin1b)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130523334 (acin1b)
Spliceosome [BR:
tfs03041
]
Complex C
Other components
EJC/TREX
130523334 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
130523334
NCBI-ProteinID:
XP_056884534
LinkDB
All DBs
Position
3:complement(5202367..5215430)
Genome browser
AA seq
1161 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLSKSGQKNTLVKRLKGALMLENLQKSSSSHC
GLQPNSQIGQEMSQNSFIQQYLAKQQELLRQRLEREAQQNEEANDSPAVVEEDEDQLEDN
DSSLRVTNKVSTRIPSEDRNCLTRCGGSPVFWQHSQSSVARVQEKGDSTLGPVITGPSAE
VPGAKIQQAAFQQGHKEPPTPSPPRAIASLSVRVLAQPPAVPRTNEEGAAPTEPGSAHPV
LHLSRSAGGHAREDSDADDSDDAESEDDEDWGPGPGGAPRANRAASQPQQAPPSMPATFA
RSKRKLQPPQHIPPPQAHHAPMQLRHPTPPPSPPPNLFPLPDTPKQSPPDTAEQEGESAA
APFEPHDMQNKDSDSSSCSSSPEPPAMRKPGPLSLLVQKMESEVAFNAGEGSHGGPASSS
KTPTHVPERRNLQGNKGVEEDKDRGQGEIEEREMEKKSPQEDTEEERKQPEGEKLQEEEK
PQDELKRREEKHQMQTEAPESGKKKVRGGGQDSDSSSDSDSKSDSSSGSSSSSSSSEDKS
KLKKKSDQKVLDNTNLRKGDKKNYLSQREVSPSAPAVTEMETESESSVVSQPPPGTEPES
REGCPDESPDPTPKTFAARKISLTSSKTPPANPDGGMSEADTGSAAGRKRRWGSSTSVIT
KKPSISITTDSLKSLIPDIKLNQEAVVELHPEELQLSGDEESQDAGRDDQAKGLKIRRTI
TQVVPSESHENGETKEEEEMETTEEDGQQGASGDTSQNSVGEEASEPQPPVKVDGEAAKV
TPSDSVVRRSISQQKSGVSVTIDDPVRTTRQPSPSRGKLSNIIHVTNLVRPFTLGQLKEL
LNRTGTMVEEGFWIDKIKSHCIVTYATTEEAVATRDALHRVKWPLSNPKVLSVDFCQQEE
LDFHKGILKPEEKEDHVVQPSAPQNRLPPLMPERDRERDRERERDKDKERERDRGAGGVR
DLWAEREKEMQRRERARGEREWDRDKVREFARPGEEERRSRSRDRERRRRERGKSKERKA
DKKAEKADEPPAKLLDDLFLKTKAAPCIYWLPLTEEQVLQKLLDRTERQKERERRHKELK
EEEEKKREDEKKDRLKVREKDAGTPAGGGGAARGADGERERGRDRDGDKKRDGGHRPGRP
SEGAVGGRHSRSRSNPRDRRR
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacaatcgctccgagtcgccgat
ttaaaggccgctctggagcagagaaacctctcgaagagcggacagaagaacacgctcgtc
aagcgactgaaaggggctctgatgcttgaaaaccttcagaagtcatcctcgtctcactgt
gggctgcagccgaactcgcagatcggtcaggagatgagccagaatagcttcatacagcag
tacctggccaagcagcaggagctcctacgacagcgactggagagagaagcccagcagaac
gaggaggccaatgacagtccagcggtggtggaggaggatgaagaccagttggaggacaat
gacagctctctccgtgtcactaacaaggtcagcacacgcattccttcagaggacaggaac
tgtttgaccagatgtggcggtagccccgtcttctggcagcattcccagtcttcagtggcc
agggtacaagagaaaggagattcaacgctaggtcccgtgataacaggtccctctgctgag
gttccaggagctaagatccaacaagctgcctttcagcaaggacacaaagagccaccgact
ccttctcccccccgtgccatagcctccctgtcggtgcgtgtcctggcccagccccccgcc
gtacctcgcaccaacgaggagggcgccgcgccgactgaaccggggtcggctcatcccgtc
ctccacttaagccggtcggcggggggccacgcccgcgaggacagcgacgctgacgacagc
gacgacgccgagagcgaggacgacgaagactgggggcccggcccgggcggggcgccgaga
gccaacagggcggcctcgcagccgcagcaggcgcctcccagcatgccggcaacgttcgcg
aggtccaaacgcaagcttcagccgccgcagcacatcccgccgccgcaggcgcatcacgcc
ccgatgcaactccgccacccgacccctcctccttctcctcctccgaacctttttccgtta
cccgacactcccaagcagagcccgccagacacggccgagcaggagggagaaagcgccgcg
gcgccctttgaacctcacgacatgcagaataaagactctgattccagttcttgttccagc
agtcctgagcctccagcgatgcgtaaaccaggacccctgtctctgctcgtgcaaaagatg
gagtcagaggtggctttcaatgcaggggaggggtcccatggtggacctgccagttccagc
aaaaccccaacacatgtgccagagagaaggaacctacagggaaacaaaggtgtggaggag
gacaaggacagaggacaaggtgagatagaagagcgggagatggagaagaaaagcccccag
gaagatacggaagaggagaggaagcagccggagggggagaaactccaggaggaggaaaaa
cctcaggatgagctgaagagaagagaggaaaaacaccaaatgcagacagaggcgccagag
agcgggaagaagaaagtccgtggtggcggccaggattcagattcctcatccgattctgac
tctaaatccgactcctcctcaggttcatcgagctcctcttcctcctccgaggataagagc
aaactaaagaagaaatcagatcaaaaagtcttggacaacactaacctgagaaaaggagac
aagaaaaactacctttcacaaagagaggtgtcgcccagtgcccccgccgtgaccgagatg
gagacggaatccgagagctccgtggtctcgcagcctccgcctgggaccgagccagagagt
agggagggctgcccggacgagagccccgaccccactcccaagactttcgccgctcgcaag
atatcgctgacaagcagcaagacgcctccggcgaacccagatggagggatgagcgaggcc
gacacaggaagtgcagcaggaaggaagaggcgttggggctcaagcacgtcggtcatcacc
aagaaaccatccatcagcattaccactgactcgctgaagtctttgattccggacatcaaa
ttgaaccaggaggcggttgtggagctacacccagaggagctgcagctgtccggggacgag
gagagccaggacgccggccgggacgaccaggccaaaggcctcaagatccgacgcaccatc
acgcaggtcgtcccaagcgagagccacgaaaatggagaaaccaaggaagaggaagagatg
gagacgaccgaggaagacggccagcagggcgcgtccggagacacgagccagaacagtgtc
ggcgaggaagcgtcagaaccgcagccccccgtcaaggtcgatggagaggcagcgaaagtc
acccccagcgacagcgtcgtgcgtcgctccattagccaacagaagtccggcgtatccgtc
accatcgacgatcccgtccgcaccaccaggcagccttcgccgtcccgtggcaaactctcc
aacatcatccacgtcaccaacctggttcgcccattcactctgggccagcttaaagagctg
ctcaacagaaccggcaccatggtggaggagggcttctggatcgacaagatcaagtctcac
tgcattgtcacatacgccaccacagaggaggctgttgccacgagagacgcgctccatcgc
gtgaaatggcccctcagcaaccccaaggtcctcagtgtggacttctgccagcaggaggag
ctggacttccacaaagggatcttaaagccagaagagaaggaggaccatgtggtccagcca
agcgcacctcagaaccgactaccccccctcatgcccgagcgagacagggagagagaccga
gaacgggagcgggacaaggacaaggagcgggagagggaccggggcgcggggggcgttcgg
gacctctgggcggagcgggagaaagaaatgcagcgccgggagcgggcccgcggcgagagg
gagtgggaccgggacaaggttcgggagttcgcgaggcccggggaggaggaacgccggtcc
cggtccagggacagagaacggaggaggagggagagagggaagagcaaggagaggaaggcg
gataagaaagcggagaaagcagacgagcctcccgccaaactgctggacgacctgttcctg
aagacgaaggcggctccgtgcatctactggctccccctcaccgaggagcaggtgctgcag
aagctcctggaccgcacggagcggcagaaggagcgcgagcgccggcacaaggagctgaag
gaggaggaggagaagaagcgggaggacgagaagaaggacaggctgaaggtgcgggagaag
gacgccggcacgccggcgggcggcggcggcgccgcccggggagccgacggggagagagag
cgcggccgagaccgagacggggacaagaagagggacggcggccaccggcccgggcggccg
tcagagggcgcagtgggcgggcggcactcccgtagccgtagcaaccccagggacaggcgc
cgctga
DBGET
integrated database retrieval system
