Takifugu flavidus (sansaifugu): 130523367
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Entry
130523367 CDS
T09160
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2 isoform X1
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130523367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130523367
Membrane trafficking [BR:
tfs04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130523367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
CCDC39
Spectrin
Motif
Other DBs
NCBI-GeneID:
130523367
NCBI-ProteinID:
XP_056884605
LinkDB
All DBs
Position
1:complement(6557850..6571924)
Genome browser
AA seq
1744 aa
AA seq
DB search
MEDSVGGESESVAQSPAGAVKSKLDTLSKDDLIKFAKKQIAGMQKMKSRCADLEKEIEVL
KQQPKSNSSGSDDSTLLKELTERMDALLLDKAELQQSLVLSRKDLENNKQKSKEELAMLH
QELDNVKEDNQSKIKTLESSIEKSSSKHQEEIAFFQKLLKEREEIDKQRESEREGECLAE
QKAKDKLAALQQELDQVVQNHQCKIEMLENSIKELNNKHHEEVAFFQNLVKEKEEIHQQR
ESEREREHAAELASAKEITETLRRSLEAQLGTLRTQLEATQEQKTQEIVELQEEHQKNLT
EAQQEVENLKEELAQMNMQHEEEMRALEEDCEVERERLMSIQDQLTEQLALKDSYLQDVK
EEDEDPALGSGIAKMLELSGLSQVDSSNCDGEDTGRSRAALEELQAQNTMLKDELTLLSN
VKDELEAELERTKEEFQVEREELEFKINELHMARESLSNDRATTTESEVQGEVQQHSETH
KDQEDKLQNECCEPRLLLGDGHHLTLEEAGARCEELTRERDLALAECQHMRNILQGVETE
LGEKTKDFIQQYNAMKEQSASTAQGLQDKLKQLKEERDELLEGMRSIAEEKKSLITDVQD
LKVKLDASAGEDQKLQISVQEQTMLASELKQSVEELTQKNEEILSQLQTKENTSQDLKNL
VQTLTVERDQIQSQLQHMEMEMQKMKSEKDKEVQKLLEEKESEVCSIREEKEKLLQSLQN
EGGDVQQLKQELEKMEHLKEEIERGQETVSALEQSVRDLSSEKTILHHKLEEITALLSES
RDSKEDLGSRLAILEAQFEQKISENNELEEQLSLLKEETEKATATIEALEKNQAEALALS
RQTVDELQTHIVELEKERNGLRNSVEEARGALMSEEAEKELQARILDLEQERNMLRNNLE
EVERDSSGLQRDLEHMKVVSERIIEENKNLQEQNSQQKEEKEKEMENVEKERKQLQDQLT
EKESLISQMKNEIAALQESAAESAASEENAASQKTDKADHANGCFSALLEEELKTKDEKM
NKMKAVAIKAKKELDISKKEVASLKEEVESLKTEREKTNSSMKDIIHGAEGYKNLQIDYD
RQTEQLDKEREKVEAAEKQITELTKRLSSAVAQNEAMHSEKEDLLAGIETVRSTLRQLET
QNQELQRQSNSYEQDLLAERAVKEQKMKDLSSAMKEVEELTAQLHKQQQQSQQTAQELEQ
LRKEAQQNSLLDMEMADYERLVKELNAKLSGKDESVKELKAQICTMTQREETLKQEIEAL
KLQQDQGEEKTSKIKQLLVKTKKDLADAKKQESSLLVQQASLKGELEGIHQQLETSKIEM
CEVTAECHRLQEQLRSAQEQQQKTSSSLQQHIISLQQESDTLKAELAATTGEFDSYKVRV
HNVLKQQKSKTTNPSDGDAGKIEREQLSSQVELLRSKLTESQQNLQSITAELQQLQAEHD
TLLERHNKILQETISKEAELRERVLSLQSENVTLQADLSQAQADLSSRVETQRQTYREQL
RKLQDDHRTTVETLQGQLTRVEEQLFHLQSQNMLVQSGRKSLSSDSQRRNTDQSQSGLGI
MALSDLQSMAREEGEGMETTETESLSPAVAPLTSFEHLLTSPDPKQEPFVWNVEPTKEEL
TQKLNTATRSMEHMNSLLHETEATNAVLMEQITLLKSELRRLERNQEREKSVANLEYLKN
VLLQFIFLRSGSERQALLPVIHTMLQLSPEEKSKLAAIAQGEEEGSGSRGSGWSSYLHSW
SGIR
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggaggattctgttggtggagaatcagagtctgtggctcagtctccagcaggtgcagtc
aagtcaaagctggacaccctgtcaaaagatgatctcatcaagtttgctaagaagcagata
gctggcatgcagaagatgaagagtagatgtgctgatttggaaaaagaaattgaagtccta
aaacagcaacccaaaagcaatagtagtggttcagatgattccactctcctaaaggagctg
actgagaggatggatgcattactgctggacaaggcagaacttcagcaaagtcttgtactg
tctcgcaaagatcttgaaaacaacaaacagaaatcaaaggaggaacttgcaatgctacat
caagagcttgacaatgtcaaagaagataaccaaagcaaaattaagactctagagagcagc
attgagaaatccagcagtaaacatcaagaagaaatagcttttttccagaaactattgaaa
gagagggaagaaattgacaagcagagggagagtgaaagagaaggggagtgccttgctgaa
cagaaagccaaggataaactagcagctctacaacaagagcttgaccaggttgtccaaaat
caccaatgtaagattgagatgctagaaaacagcatcaaggaattaaacaacaaacaccac
gaggaagtagcttttttccagaatctagtgaaagagaaagaagaaatccaccagcagaga
gagagcgaaagagaacgtgagcatgcagctgagctggccagtgcaaaggagatcactgaa
acactccgtcgaagcttagaggctcaattgggaacccttcgaacgcaactggaagccacc
caagagcaaaaaacacaggagattgttgagctgcaggaggagcatcaaaagaatttgaca
gaagcccagcaggaggtggagaacctcaaggaggagcttgcccagatgaatatgcagcac
gaggaggaaatgagagctttggaggaggactgtgaagtagagagggagcgtctaatgtca
atccaggatcagctgacggagcagcttgcgcttaaagacagctacctgcaagatgttaaa
gaggaagatgaggaccctgcgcttgggtcagggatagccaaaatgcttgaactctctggc
ctcagtcaggtggactccagtaattgtgatggagaagatactggaagatccagagctgct
ctggaagaacttcaagcccagaacaccatgttaaaagatgagctcacactgctcagtaat
gtgaaggatgagcttgaggccgaactggaaaggaccaaggaggagttccaggtggagaga
gaagagctggaattcaaaatcaatgaattacacatggctcgagaaagtctttctaatgac
agagcaacaaccacagaatctgaggttcaaggagaggttcagcaacacagtgaaacgcat
aaagaccaagaggacaagctacaaaatgaatgctgtgagccacggctgctccttggagac
ggacatcacttgaccctagaggaggctggagcacggtgtgaggagctaaccagagaaaga
gacttagccctggctgaatgtcaacatatgaggaatatactgcaaggtgtggagacagaa
ctgggtgagaaaacaaaagattttattcagcagtataatgcaatgaaggagcagagtgca
agtactgcacagggactccaggacaagctgaaacaactcaaagaggagagggatgagctg
ctggagggaatgaggagcattgcagaggagaaaaagtctctgatcacagatgttcaagac
ctgaaggtaaagcttgatgcgtcagcaggtgaggaccagaagctccagatttctgtacag
gaacaaacaatgttagctagtgaactgaagcaatctgttgaggaattgacccaaaaaaat
gaggagatcctttcccaactccagacgaaggaaaacacgagtcaagatttgaagaattta
gtccagactctgactgtagagcgagatcagatccagtcgcagctccaacatatggaaatg
gagatgcagaagatgaagagtgaaaaagataaagaggttcagaagctgctggaggagaag
gagagtgaagtgtgctcgattcgagaggagaaggaaaagctattgcagagcctccagaat
gaaggaggggatgtacagcaactaaaacaggagttggaaaagatggaacacttgaaagag
gaaatagagagaggacaagagacagtttctgctttagagcagagtgtgagagacctctca
tctgaaaaaactattctccatcacaaactagaagaaataactgctttgctctctgaatca
cgtgactcaaaggaggatttaggctcccgtttggcaatcctcgaagctcagtttgagcag
aagatatctgaaaataatgaactggaggaacaacttagtttattgaaagaggagacagaa
aaagccactgccaccattgaagctttggagaaaaaccaagcagaagctctagcactctcc
agacaaactgttgatgaactccaaactcacattgttgaactggaaaaagagaggaatggt
ctaagaaatagcgttgaagaagctcgaggggctttaatgtcagaggaagcagaaaaagaa
ctgcaggctcgcatcctggaccttgaacaggagaggaacatgttgagaaacaatctggag
gaggtggagagggatagcagtgggctgcagcgggacctggaacacatgaaggtggtcagt
gagaggatcatcgaagagaacaagaacctgcaggaacaaaattctcaacagaaggaagaa
aaggaaaaagagatggaaaatgtggaaaaagagagaaagcagcttcaagatcagctgaca
gagaaggaatcccttatttctcagatgaagaatgaaatagctgctctccaggaatctgct
gcagagtctgctgcttctgaagaaaacgcagccagtcagaagacagataaagcagatcat
gctaacggttgcttctcagctctactggaggaagaactcaaaaccaaagacgagaagatg
aacaaaatgaaggcagtggccatcaaggcaaagaaggaactggacattagtaagaaagag
gtggcaagcctcaaggaggaggtagaatcattgaaaacagagagggagaaaacaaacagc
tcaatgaaagacatcatccacggggctgaaggctacaagaacctgcaaatagattatgac
aggcagacagagcaactggataaagagcgggagaaggtggaggcagcggagaaacaaatc
acagagctgaccaaacgactcagcagtgccgtcgcacagaatgaagcaatgcatagtgaa
aaagaagacttgttggctggaatcgagactgtcaggagcacattgaggcaactggagacc
caaaaccaggagctgcaaagacaatcaaacagctatgagcaagatctgctggcagaaaga
gctgttaaagaacaaaaaatgaaggacttgtcatctgccatgaaggaggtagaagagctg
acagcccagctccacaagcagcagcagcagtctcagcagactgcccaggagctggagcaa
ctacgcaaggaggcgcagcagaactctctgctggacatggagatggctgactatgaacgc
ctggtaaaagagctcaatgccaaactctcgggaaaagatgaatccgtgaaggagttaaag
gctcagatatgcacaatgacccagagagaggaaacactcaaacaggaaatagaggctttg
aagttgcagcaggaccagggggaggagaagacgtccaagataaaacagttgctagtgaag
accaaaaaggatttggctgatgccaagaaacaggaaagttccctcctggtgcagcaggcc
tccctgaaaggagagcttgagggtatccatcagcagctagaaacttccaagattgagatg
tgcgaggtgacagctgagtgccatcgactgcaggagcagctcaggtctgcacaggagcag
caacagaaaaccagcagctccctgcagcagcacatcatcagcctgcagcaggagagcgat
actcttaaggctgagcttgcagcaacgacaggcgagtttgacagttataaggtccgagta
cacaatgtgctaaaacagcaaaagagcaaaacgaccaacccgagtgatggagatgctggt
aaaatagagagagagcagttgtcctctcaggtagagctgctgagatcgaagctaacagag
agtcagcagaacctccagagcatcactgcagagctgcagcagctccaggctgagcatgac
actctactcgagaggcacaataaaatcctccaagaaaccattagcaaggaggctgagctc
cgtgagagagtgctgtcactgcagtcagaaaatgttactctgcaggcagatctgtctcaa
gcccaggctgatctgtcgtctcgggttgagacccagcgtcagacctacagggaacagctg
aggaagctgcaggatgaccacaggaccactgttgagactctgcagggtcagctgacacgt
gtggaggagcagctcttccacctacagagccagaacatgttggtccagtctgggcgcaag
tcgctgtcatcagactctcaacggagaaacaccgatcagagccagtcggggctgggaatt
atggccctcagtgacctccagtccatggccagggaagaaggcgagggtatggaaaccact
gagaccgagagcctgtctcccgccgttgcaccccttacctcttttgagcatctgctcaca
tccccggaccccaaacaagagccatttgtgtggaatgtggagcctaccaaagaggaactg
actcagaagttgaatacagccacacgcagtatggaacacatgaacagcctgttgcacgag
accgaagccaccaatgctgttctcatggagcaaatcactctgttgaagagtgagctgcgt
cgtctcgagagaaaccaagagcgagagaagagtgtggccaacctggaatatctgaagaat
gtcctcctgcagttcatcttcctgcgttctggcagtgagaggcaggccctgttgcctgtc
attcacacaatgctgcagctcagtccagaggagaaaagtaaactggctgctattgcgcaa
ggtgaagaagaggggtctgggagtcggggctcgggctggagctcttacctccacagctgg
tctgggatccgataa
DBGET
integrated database retrieval system
