Takifugu flavidus (sansaifugu): 130523410
Help
Entry
130523410 CDS
T09160
Name
(RefSeq) CLIP-associating protein 1-B-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130523410
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfs04812
]
130523410
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
130523410
Cytoskeleton proteins [BR:
tfs04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
130523410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
TOR1L1_N
Sec7-like_HUS
Adaptin_N
Cnd1
RTP1_C1
HEAT_DAAF5
Paxt-1_C
MMS19_C
Motif
Other DBs
NCBI-GeneID:
130523410
NCBI-ProteinID:
XP_056884670
LinkDB
All DBs
Position
3:complement(11200564..11224561)
Genome browser
AA seq
1617 aa
AA seq
DB search
MDEDVVAMEYLLDHVTHKDVGRRLQVGQEVIELILDGEKSPDLEQDQSMMDRMVEAVASS
WVNSSNFKVVLLGMDILSALVSRLQERFRTQVGTVLPSLMDRLGDAKDQVRDQDQALLLK
IMDQAANPQFVWERMMGGFKHKNNRTREGLCLCLISTLNVFGSQSLTLSKIVPHICHLLG
DPTSQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMVLSPM
SDKNFEDDDSVDGGRSSSSSKGASLSGRKAVSMGSFRRPSSASGSKSAGREGSGAGAVDV
EDFIQAFEDVPTVQLYSNREMEEAMTKIRDVLSDDKRDWELRVAALKKVRSLLLAGAAEF
DGFPQQLRLMEAAFKLSAKDLRSQVVREACITLGHLSSVLGGRFDHAAEATMPILLNLVP
NSAKIMATSGMAAIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTSS
LERHGTVLMETIKKGIHDADAEARSVARKCYWSFHGHFRREADQLFQGLESSYQKALQTH
LRSGDSMMSLPASDRSSSSSQESLNRPLPVKNTFGSATSRTKGPPTRTPAAAPATSSLQR
SRSDVDVNAAATASARTRMPAAPSVPSAASPFSSASALPPGSYASLDGPCSVNVDGRVRT
RRSSSGNGPSVTDSRGRSRGKVVSQSQPGSRSGSPGRLLTATYGRIPRPTMGSSAANSAA
PGLTDKSLARGHRSQGCSRETSPSRSGAARSRIPRPSMSQGCSRETSRESSRDTSPARGF
SPLATRRHSRSTSALSSADCYSDRLSHQARISASVNAMRILNTGTEVEAAVADALLLGDS
RSKRRPVRRRFESPGLYSDDDANSDASSACSERSYSSRNGGAAPHYMRQTEDVAEVLNHC
ASANWSERKEGLLGLQNLFKSQRMLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFI
VLHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPYEQQFNILMRFIVD
QTQTPNLKVKVAILRYIEALARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKTLHN
WAGEELSGRASTVASLPGEGNLEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGT
TKLLHNHLRNTSASSGITMASPSNSSVRAAPRQQGSRSSPLTSPTNCSHGGLSPSRLCSW
STDGLSKFSSPPFPSTLPPLSAYSSLKQVRRVYSPSMMEYDSENLNSEEIYSSLRGVTEA
IQSYSFRSQDDPMELRRDGKRDAMSGVGASSDADAAGCGRTALDNKTSLLNTPSPRSFAG
PRFRDYNPYNYTDTLDKAATKEPGYEGGGEHQRDGGRHDCVENKVVSPKGFPAGPMEQLE
LVGGLLKELSHAQAGERGPDERRGTLLELLKVAREDSLVVWEEHFKTMLLLLLETLGDKD
HTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIH
PEQCIKVLCPIVQTADYPINLAAIKMQTKAIERIAKEPLHQLLSDIIPGLLQGYDNTESS
VRKASVFCLVAIYSVIGEELKPYLSQLTGSKMKLLNLYIKRAQTSSNSSSSSDISSY
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggacgtggtggccatggagtatttgctggatcacgtgacgcacaaggacgtt
gggaggaggctgcaggtgggacaggaggtgatcgagctcatcctggacggggagaagtcc
cctgacctggagcaggaccagtccatgatggacaggatggtggaggctgtggccagttcc
tgggtcaactccagcaatttcaaggtggttttgttggggatggacatcctgtcagccctg
gtcagccggctgcaggaaagattcaggacacaggttggaacagttctgccgagcctcatg
gaccggctgggggacgcaaaggaccaagttcgggaccaggaccaggccctcctcctgaag
atcatggaccaggctgccaacccacagtttgtgtgggagcgtatgatggggggcttcaaa
cacaagaacaacaggaccagagagggtctctgcctctgtcttatttcaactttaaacgtg
tttggatctcagagtctgacgctcagtaaaatcgtccctcacatctgtcacctgctcggg
gaccccacaagtcaggtgcgggatggagcgatgaactgcctggtggagatctaccgtcac
gttggagagcgagtgcggatggatcttggaaagaagggtctccctcagtctcggctgaac
gtcatctttagcaagtttgacgaagtccagaggtcagggaacatggtgctgtctcccatg
tcagacaaaaacttcgaggacgatgactctgtggacgggggacgctcctcatcctcatcc
aaaggagcctcactgtcagggaggaaggcagtgagcatgggctcatttcgacgtccgtcc
tccgcctccggcagcaagtctgcagggagggaaggctctggcgctggagctgtggacgtg
gaggacttcatccaggcctttgaggatgttcccactgtacagctctactccaacagggag
atggaggaggccatgacgaagatccgagacgtcttgtctgacgataagcgggactgggag
ctcagagtggcagctctgaagaaggtgcgatcactcctcctagctggcgccgcagagttc
gacgggttcccgcagcagctgcggctcatggaagcggcgttcaaactctccgccaaggac
ctgcgctctcaggtggtcagggaggcctgcatcactctgggacacctgtcatcggtgctc
ggcggccgcttcgaccatgctgctgaggccaccatgcccatcctgctcaacctggtcccc
aacagtgccaaaatcatggccacctccgggatggctgccatccgcctcatcctcagacac
acacactacccgcgtctcatccccatcatcaccagcaattgtacctccaaatccgtggct
gtgcgacggcgctgttatgagttcctggatctgctgctgcaggagtggcagaccagctct
ctggagaggcatgggaccgtcctgatggagaccataaagaaaggcatccacgatgcagac
gcagaggctcgctctgttgccaggaagtgttactggagcttccacggccacttccgtcgg
gaggcggatcagctcttccaggggctggagtcgtcctatcagaaagccttgcagactcac
ctgaggagcggagacagtatgatgtcactgcccgcatccgaccgctcctcttcatcctct
caggagagcctgaatcgacctctgccagtgaaaaacaccttcggaagcgcgacgtcaaga
accaaaggccctcccacccggaccccggctgcagccccagccaccagctccctccagcgt
tcccgtagcgatgtggacgtcaacgcggcggccactgcctccgcccgtaccaggatgcct
gccgcgccctcggtgccgtcggcggcgtcgcccttcagctcggcctccgcgctccccccc
ggttcctacgcttcgctggacggcccgtgctctgtaaatgtggacggtcgagtgagaacc
aggcgatcgagctcagggaatggtccgtctgtgactgacagcaggggaagaagtcgaggg
aaggtggtctcgcagtctcagcccggcagtcgttccgggtctcctggaagacttctgacc
gccacctatgggaggatccccaggccgaccatgggcagcagcgccgctaacagcgccgca
cccggcctgacggacaagagcttagcgcgggggcaccgcagccagggctgcagccgtgag
accagccccagcagatcaggagcagcccgcagtcgaatcccccggcccagcatgagtcag
ggctgcagccgcgaaaccagtcgcgagagcagccgtgacaccagccctgccaggggtttc
tcccccctggccacccgccgacactcccgctccaccagcgccctgtcctctgcagactgc
tactcagaccggctgtctcatcaggctcggatctccgcgtccgtcaacgccatgcggatc
ctgaacaccggcacagaggtggaggccgccgtggccgacgctctgctcttaggagactcg
aggagtaagcggaggccagtgaggcggcgttttgagtccccgggcttgtactcggacgac
gacgccaacagcgacgcctccagcgcctgctccgagcgctcgtacagctcacgcaacggc
ggcgcggcaccgcactacatgcggcagacggaggacgtcgccgaagttctgaaccactgc
gccagcgccaactggtccgagaggaaggaggggctgctgggactgcagaacctgttcaag
agccagaggatgctcagtcgtgtggagctgaagagactctgtgagatcttcaccaggatg
tttgcagatcctcacagcaaggtgttcagcatgttcctggagacgctggtggacttcatc
gtgctgcacagggaggacctgcaggactggctctttgtcctgctcacacagctgctgaag
aagatgggggccgacctgctgggctccgtccaggccaaagtccagaaggcgctggacgtc
accagagagtccttcccgtatgagcagcagttcaacatcctgatgcgtttcatcgtggat
cagacgcagacgcccaacctgaaggtgaaggtggccattctgcgctacatcgaggcgctg
gctcgccagatggacccggctgactttgtcaactccagtgagacgcgtctcgccgtgtca
cgcatcatcacgtggaccaccgaacccaagagctccgacgtccgaaagacgcttcataac
tgggcaggtgaggagttgtcaggccgagccagcaccgtggcctccctgcctggagagggc
aacctggaggagaggtgcaagcaggcagcccaggtggtgctgatcgccctgtttgagctc
aacacacctgagttcaccatgctcctgggcgctctgcccaaaaccttccaggacgggacc
accaagctgttgcacaaccacctgaggaacaccagcgccagcagcggcatcaccatggcg
tctcccagtaactcctcggttcgggcggcaccgcggcagcagggcagccgcagcagtccg
ctgacctcccccaccaactgctcccacggggggctttctcccagccggctgtgtagttgg
agcacagacgggctctccaagttctcttctccacctttcccttccactctacctccgctc
tctgcctattcctccctcaagcaagtacggcgagtttactccccaagcatgatggaatac
gacagcgagaacctgaactcggaggagatctacagctccctgcgcggcgtcaccgaggcc
atccagagctacagcttccgcagccaggacgacccgatggagctgcggcgagacgggaag
agagacgcaatgtccggagtgggagcgtcctcggacgccgacgcggcgggctgcggtcgc
acggctctggacaacaaaacctcgctgctgaacacgccgtcgccgcgctccttcgctggg
ccgcgcttccgagactacaacccatacaactacaccgacacgctggacaaggccgccacg
aaggagccgggctacgaaggcggcggggagcaccagcgcgatggtggacggcacgattgc
gtggaaaacaaggttgtgagccccaaaggtttcccagccgggccgatggagcagctggag
ctggtgggggggctgctgaaggagctgtcccacgcccaggctggggagcgcggcccagac
gagaggcgggggaccctgctggagctgctgaaggtggcccgggaggacagcctggtggtg
tgggaggagcacttcaagaccatgctgctgctgctgctggagacgctgggggacaaagac
cacaccatccgggccctggccctgcgggtcctgaaggagatcctgaggaaccagccggcc
cgcttcaagaactacgccgagctgaccatcatgaagacgttggaggcgcacaaagactcg
cacaaggaggtggtccgggcggcggaggaggcggcctccacgctggcgggctccatccac
ccggagcagtgcatcaaggtgctctgtcccatcgtgcagacggccgactaccccatcaac
ctcgccgccatcaagatgcagaccaaggccatcgaacgcatcgccaaggagccgctccat
cagctgctgtctgacatcataccgggcctcctgcagggctacgacaacactgagagcagc
gtgaggaaggccagcgtcttctgcctggtggccatctactctgtgatcggggaggagctg
aagccgtacctgtcccagctgaccggcagcaagatgaagctgctcaacctgtacatcaag
agagcccagacctccagcaacagcagcagctcctctgacatctcctcctactag
DBGET
integrated database retrieval system
