Takifugu flavidus (sansaifugu): 130523478
Help
Entry
130523478 CDS
T09160
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04136
Autophagy - other
tfs04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130523478 (atg13)
04136 Autophagy - other
130523478 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130523478 (atg13)
03029 Mitochondrial biogenesis [BR:
tfs03029
]
130523478 (atg13)
Membrane trafficking [BR:
tfs04131
]
Autophagy
Autophagosome formation proteins
ULK complex
130523478 (atg13)
Atg1 complex
130523478 (atg13)
Mitochondrial biogenesis [BR:
tfs03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130523478 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
130523478
NCBI-ProteinID:
XP_056884813
LinkDB
All DBs
Position
3:18464426..18470495
Genome browser
AA seq
539 aa
AA seq
DB search
MESGLSPQDKKDLDKFIKFFALKTFQVIVQARLGEKICTCSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLGGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSNRQFERLAPIMGIIVDHFVDPPCSNQRPVNFGQPCNYKAPEED
RGAFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKQSKPTPLDSLQLPLAPGFVTHTLY
SSRLLYQPSAVAGTADLCQPAANPNPMLHAGKEGGVVLVPAQPSHGADAHFENVTNTPGS
SGEDDGLLQSGEGKREEGRCRSSPTSDPVQAINAFTRKTGAFVNKPSTQTLTANLDLPFS
EFAPRGLDSEENDPMVQPPDSPLCTSPLQRSLHSQGSEGSGPHDDFVMVDFRPAFSKDDL
LPMDLGTFYREFQNPPQLASLTLDISSQSMADDLDSLPEKLAVYEKNIDEFDAFVDTLQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggcttgagtcctcaagataaaaaagatttggacaagttcatcaagtttttc
gccttgaagaccttccaggtgattgtacaagctcgtcttggagagaagatctgcacatgc
tcttcctcgtcacccactggctctgactggtttaacctggccattaaagacattccagag
gtcactcatgaagctaaaaaggcactagctgggcaacttccaggcataggtcgctccatg
tgtgtggagatctccttgaaaacatcagagggagactccatggagttggagacgtggtgc
ctggaaatgaatgaaaagtgtgataaagacattaaagtgtcgtatacagtctacaatcgt
ctgtctgtccttctgaaatctctgctggctatcacaagagtaacacctgcgtacaaactg
tccagaaagcagggacatgactatgtcatactctataggatttattttggggaagtgcag
ctcggtggattaggtgaaggtttccagacagtgcgtgttggtgttgttggtaccccagtt
ggcacggtcacgctgtcatgtgcttaccgcaccaaccttgcattcatgtccaacaggcaa
tttgagcgtttagcccccatcatgggaatcattgtagatcactttgtggaccccccctgt
agcaaccagcgtccagtaaactttggacagccctgcaactacaaagctccagaggaggac
agaggagcatttgcaggggttcaggattcacaggaggtctgcaccacctccttctcaacc
tctcctccatctcagtgtgtgtgcacactgagcccttcgccctctaaacagtctaagccc
acccccttggatagtcttcagcttccattggctcctggatttgtcactcacactctgtac
tcatccagattattataccagccgtctgccgtggcaggaacagcagacctttgtcagcct
gctgccaatccaaacccgatgttgcatgctgggaaggagggtggagtggtgctggttccg
gcccagccttctcatggagccgatgcgcattttgagaatgtaacaaacacacctggaagc
agtggtgaggatgacggcctcttgcaaagtggggaaggcaagagggaagaagggaggtgc
cggagttcccccacctctgaccctgtccaggcaataaacgccttcacgagaaagacgggg
gcctttgtaaataaacccagcacacaaacactgacagccaatctggacctgcccttctct
gagtttgctcctcgaggcctggactcagaggagaatgatccaatggtgcagccgccagac
tctccactttgcacatcccccctccagcgcagccttcattctcagggctcagagggctct
ggaccacacgatgactttgtcatggtggactttcgaccagctttttcaaaagatgatctg
ttgccaatggatctcggtactttctacagagagtttcagaatcccccgcaactagctagt
ctcacgctggacattagttcccaatcaatggctgatgacctggactcgcttccggaaaaa
ctggcggtgtatgagaaaaacatcgatgagtttgatgcttttgtggatacgctccagtag
DBGET
integrated database retrieval system
