Takifugu flavidus (sansaifugu): 130523646
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Entry
130523646 CDS
T09160
Symbol
cpne1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130523646 (cpne1)
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130523646 (cpne1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
130523646
NCBI-ProteinID:
XP_056884975
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Position
4:17435388..17454286
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AA seq
889 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQSMIELSRRRFEAGTSTAETAATATGNANRQVAQIPTVQTG
AGGRSGNHGNQAFSNTQASVTAASSSQESPSNKAVASIVPSFATSYSSAPTITTALTSLS
AGPPPIPPLPSMPSMPPIPSLPTIPVPPPVSSLPPVPTVSPLSQGPPVPPMSHLPHVSSL
PHFNPSLPPPAGLASGLPLGTPNPMLFNPLSPLASLGLQAHMKAAAAASGAAAMTRDELF
VLLQNLPFACTEVDVRGFFRGLGVDAVRFLKDAQGRHTGKAMVKFFSPQESFEAVKRGGG
MMGQRFIEINPGSEQQWASINDGTASQASHSGNKSNIELQQHCRNNSGVEARDQRGRSRS
PHRQEFCIYLKGLPYEADKKQIKEFFNNLAIIEDSIYIAYGPNGRATGEGFLEFKTEQDH
KAALGAHMQYMGSRFIQVHPVSRKGMLEKIDAIRKREASHGGGKSQDGSKNPRNCVHITN
IPYNISKKDVRAFLEGVGLYEDSLKVLTDSHGNGLGQSIFQLRSEEDARKAERLHRQKLN
GRDAFVHLVTVEQMKEIERNPPPQNKRGQRGQNQMSQNQNQNQQAQLNAQHSQMNPFAAI
SGDEFTFLRNTMGNLNNAPFVTPFSATGNGLAGPPPMPPLAAGLGEVNLGVAPPLVSGLP
GAPMLEPPGFRPGPVGGAPFGQDGLRGLVPFDNTNRKVGGGGQSRGGAANNHQGRPVVGG
AGGQQVFIPGNDGLLSQPGGTPNSNSQCAAGPTVVKLQNMPFTVTVDEIMDFFYGYQVVP
GSVCLQFSEKGLPTGEAMVAFQNHEEATAAVLDLNDRPIGARKVKISLG
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagtcatcaggctgcaaggtctgcccatagtggccggcaccatggacatcagg
cacttcttctctggcctcacaatccctgatggtggagtgcatattgttgggggtgaacat
ggtgaggctttcatcgtctttgccactgatgaagacgcccgactgggaatgatgcgtaca
ggtgggtccattaagggctcaaaagtgtctttgttgcttagcagcaagactgaaatgcag
agcatgattgaactcagccgccgcaggtttgaggctggaacaagtaccgcagaaacggct
gcaactgccacgggaaatgcaaaccggcaagtggcgcaaatacccacggtgcagacgggg
gcaggtggccgaagcggtaaccacggcaaccaggctttcagtaacacccaggcctcagtg
acagcagcaagttcctctcaggagtctccaagcaacaaggcagtggccagcatagtgccc
agctttgctacgagctacagttctgcccccacaatcaccacagctctgacatctctcagt
gcaggccctccacctatacccccgcttccaagcatgccttccatgcccccgatcccctca
ctacccacaattccagtccctcccccagtgtcttccctcccccctgttccaactgtgtct
ccactgtctcaaggacctccagttcctccaatgtcccacctccctcatgtgtcatctctt
cctcattttaacccatcattgccacccccagcaggcttggcctccggcctcccccttgga
acgcccaaccccatgctgtttaaccctctttctcctctggcctctcttggcctccaggcc
cacatgaaagctgcagctgctgccagtggagcggcagcaatgactcgcgatgagttgttt
gtcctcttacagaaccttccgttcgcatgcacagaggtagatgtcagaggtttcttcagg
ggtctgggtgtggatgcggttcgctttctaaaggacgcacagggccgacatactggaaaa
gcgatggttaagttcttttcgccccaggagagttttgaagctgtgaagaggggcggaggc
atgatgggccagaggttcattgaaatcaatccaggctctgagcagcaatgggccagcatc
aatgacggtacagcaagccaggcttcacacagtggcaacaaatcaaatatcgaattgcaa
cagcactgccgtaataattcgggggtggaagcaagggatcaacgaggaaggtcacgatct
ccccaccggcaagagttttgcatttacttgaaaggcctcccctacgaagcggacaaaaaa
cagatcaaagagttcttcaacaatttggccatcatagaggacagtatctacattgcttat
ggacctaatggtcgagccactggagagggcttccttgagttcaaaactgaacaagaccac
aaggccgcgctgggtgctcacatgcagtacatgggtagccgcttcatccaggtccaccca
gtcagccgaaagggaatgcttgaaaagatagatgcgatcagaaaacgagaagcatctcac
ggtggcgggaagagccaagatggctcaaagaatccccgaaactgcgtccacatcaccaat
attccctacaacatttccaagaaggatgtccgtgccttcctggagggggtggggctttac
gaagacagccttaaggttctcacagatagccacggcaatggtttgggtcagtctatcttc
caacttcgtagcgaggaagacgccagaaaagcagagagactgcaccggcaaaaactcaat
ggtcgcgatgcttttgttcacttggtgactgttgagcagatgaaggaaatcgagaggaat
cctcctccgcaaaacaagagaggccagcgcggtcaaaaccagatgagccaaaatcagaac
cagaaccaacaagcccagcttaatgcccagcattctcagatgaacccgtttgctgccatc
agcggtgatgaattcacttttcttcgaaacactatgggaaaccttaataatgcccccttc
gtcactccattctcagccactggaaacggactggcaggccctcctccaatgcctcctctt
gccgcagggctgggggaggtaaatctgggtgtagcccccccacttgtttctgggcttccg
ggagcaccgatgttggagccaccgggctttcggcccgggccagttggaggagccccgttt
ggccaggatggactcagaggtctggtaccctttgacaataccaacagaaaagtaggtggc
ggaggccaaagtcggggaggagccgctaataaccaccaaggacgtccagttgttggaggt
gctggtggacagcaggtgtttatcccaggaaatgatggtctcctcagtcagcctggggga
acccctaattccaacagtcaatgtgctgctggaccaacggttgtaaagctccagaacatg
ccattcactgttaccgtggatgaaattatggacttcttttacggctaccaggtggtgcca
ggctcagtctgccttcagtttagtgagaaaggcctaccaacaggtgaagccatggtggcc
ttccagaaccacgaggaggctacggctgccgtgctagacctcaatgataggcctattgga
gctcgcaaggtcaagataagcctgggctaa
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