Takifugu flavidus (sansaifugu): 130523712
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Entry
130523712 CDS
T09160
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03013
Nucleocytoplasmic transport
tfs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130523712
03015 mRNA surveillance pathway
130523712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130523712
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130523712
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130523712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
130523712
NCBI-ProteinID:
XP_056885160
LinkDB
All DBs
Position
4:3591553..3596691
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AA seq
484 aa
AA seq
DB search
MSTDSWAQAVDEQEAAAESIGNLQIKERPEENGTTANATNIGAATPDATGDKSTEDDKDD
RAAQSLLNKLIRSNLVKNTNQVEVLQKDPNSPLYSVRTFEELRLKPQLLQGVYSMGFNRP
SKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPSRKYPQCLCVSPTYELA
LQTGKVIEQMGQYYSEVKLVYAIRGNKLPRGTKLQEQIVIGTPGTMLDWCGKFKFFDPKK
ILVFVLDEADVMIDTQGHQDQSIRIQRMLPQSCQMLLFSATFEESVWNFAKRIVPDPNII
KLKREEETLDTIKQYYVLCNSREEKFKALCNIYGAITIAQAMIFCHTRKTAGWLAGELSR
EGHQVALLSGEMQVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKD
GNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNKIQEHFNKKIERLDTDDLDEIE
KIAS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtctacggactcttgggcccaggcggtggatgagcaagaagcagcagcagaatcgatt
ggtaatcttcaaataaaagaaaggccagaggaaaatggtacaaccgccaatgcaaccaat
attggagctgcaacaccggatgcaacgggagacaaatccacagaagatgacaaagacgac
agagcggcacagtcattgttaaacaaactgatacgaagcaatcttgtcaaaaacaccaat
caagtggaagttcttcagaaggatcccaactccccgctttactccgtcaggacttttgag
gagttacggctcaaaccacagctgcttcagggtgtgtacagcatgggttttaacagacca
tccaaaatccaggagactgccttacccatgatgctcgctgaacctccacagaatcttatc
gcccagtcacagtcgggaactggtaaaacagccgcgtttgttctggcgatgctcagtcat
gtggatcccagtagaaaatatcctcagtgcctgtgtgtgtcacccacgtatgaactggca
cttcaaactgggaaggtgatagagcagatgggacaatactattctgaggttaaactagtg
tacgccatcagaggaaataaattgccgagagggacaaagctccaggaacagatagttatt
ggtacacctggcacgatgctagattggtgtgggaaatttaagttttttgaccccaaaaag
atcctggtgtttgtgctggatgaagctgacgtcatgatcgacacacagggtcaccaggat
cagagcatccggatccagaggatgctgccccagagttgccagatgttacttttttctgct
acctttgaagagtcggtgtggaactttgccaagcgcatcgtgccagaccccaacatcatc
aagttgaagagagaagaggaaacattagacaccatcaagcagtactacgtgttgtgcaac
agtagagaagaaaagttcaaggccctctgcaacatctacggagctatcaccatcgcccag
gccatgatcttctgccatacaaggaagaccgcaggctggctcgctggcgagttgtccaga
gaaggccaccaggtggcgctacttagcggggagatgcaggtggagcagagagctgctgtg
attgaacgcttcagggaaggaaaagagaaggtcctggtcaccacgaatgtttgtgctcga
ggtatcgatgtggagcaggtgtcagtggtcatcaactttgacttgccggtggacaaagac
ggtaacccagacaacgagacatacctgcacaggattggccgcacgggtcggtttggcaaa
aggggcctggccatcaatatggtggacagcaagatgagcatgaacatcctcaacaaaatc
caggaacatttcaataagaaaattgagagattagacacagatgatctggatgaaattgag
aaaatcgccagctaa
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