Takifugu flavidus (sansaifugu): 130523892
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Entry
130523892 CDS
T09160
Name
(RefSeq) rho guanine nucleotide exchange factor 40-like isoform X1
KO
K23860
pleckstrin homology domain-containing family G member 4
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
130523892
Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
130523892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
IQ_SEC7_PH
PH_10
Motif
Other DBs
NCBI-GeneID:
130523892
NCBI-ProteinID:
XP_056885475
LinkDB
All DBs
Position
4:complement(3865879..3883674)
Genome browser
AA seq
1804 aa
AA seq
DB search
MNPESLDSSIQSALSALFPPFEVTAPTVLSQLFRLIEERYCGDALQCLLDFLIPSKHLLE
SVQQAACAGYSDVVFRCEGWPLCLHDKIVIQLAPVNPLLLRPGDFYLQVEPFGDQAVRIV
LKSLLEEGCREVEETPILETSYPCMFTEEWLQDLNEGRHGTPLSRCLLCTDQGVVKLPWA
KIAIPEFLDKPKIVPMYQEQTPERKHKTAPSHFNSSTLPVEAIFHPAKELMSASLRPVDC
GFRRIPKSRSKPLIKPVGWVSPNNWDSPESCREIEGDYVDLVDLAKGQEVPGKPNDDQLQ
MPVFKPVRPPPPVPCGNGTPCTCTLQYDEAGHELTDQDLNCRYRDSYAAALRNPVAFKKG
SVDHLSALQEGGLPDEALPSQNISRAQDDQLENVCNHFNKPLNNEPHQHRRSQTRRESIE
AAQANIEEHVDSENVMKEPPVVLTSSPGLRHSEKVTMKLISKQPDPNGGVTLEEFLENNQ
PHQTAEATRPPGKQHVKVRSLSTVSETSKGSPLLYKLSSRSHSDVCPDTISSVMQLKKGE
LLDQMSQKQERRKSPRKELLPSRSESPSVVNGPVSKLHNSKTERPSSSLHRFEAQNSSQS
GQPSFRSISGLLELGIICLPGSRDRTGRSVVEVHGDRKEWASPLVSAQNVCELLLYLSSI
PRKEIRELGMTLVINARKKSPPLHLYKALLMAQEQALHAVHSIVTLVDKDTCPRPEKHPG
LQMDLVTSMKALNKTVEASQLTSDLGGSFAYSHADWLQFHQRLVSFMADLREADSLLQRA
IEKVDERSKLDTAQEVQQCIEEQRCSMKEVLEDARLVTLQREGGAVLARMRREDFRFPQS
EDYRDALESATALYNQVEEKLHTLVMRSNESLQQLHFLFRLREMEAKISTVGMWLNSEGE
QMLEDSDTSDSLGGAEKALQHYDLLLTQAKEKQQYAVSLVTEAEEIVGLGCSCPATDIFG
TLVRTFKSDMDDFMLRAEQRHKELETVLHVHSFCAQASALAKECSHFLEKVEQRCYSAST
QSTLQMFEEKLGGEFSTLNFQAVKAKACAVGSGAGGAMKAWNAAWVQCQQLRQHLHKMKE
IQQITAAHPQPEDVGVEKTEEGSDGRQLNCQKDNVQLCEHEGGESTIATSLHQCLKPELT
GNLPHATVQCAAFPHNSRRPREHHSEADLRTVDPAEGDSGCPARQHLGRSLSEGSQAGCQ
LPSSFIPLNVRNKHCQSRTQPLQRNLHPVHKLPGCHNNSGSGHLRSKSDGKDEYCEGCAV
SSGVPRALTPETSPTSTANISNNLKLQKIMEELLTTEREYVSALGYVRDHYFPELERADV
PQDLRGQRGIIFGNLEKLHDFHQHHFLSELEGCVNEPFRVGRCVLRHKESFALYALYSKN
KPQSDALFISHGQSFFKQKQLKLGDKMDLWSYLLKPVQRISKYSLLLQDMMADCGPGQSR
EMAEVKAALEVIHFQLRHGNNLLAMDAIQHCDVNLKEQGQLIRQDEFLVTFRKKKCFRHI
FLFQELILFSKTRKTEVGNDTYIYKQSFKTTDIGLTQNSGDTGLCFEIWFRKRKTQDTYT
LQAVSRAVKEAWTRDLERILWEQAVHNREIRMQERVFMGIGNKPFMDIQPSDAAISDRAV
NCVLIGRDNKLLSSAGSSRGVEDGLPGGRPKSLGSGSTSSSSSSSGIGSLSPVGYLCRPK
RRVASGGIGGYVSPPGALEEDDLDQGSVVHNLLLDSSESSGESVSGFSSSSLSYHSAIGG
EAEDAGSVCGSTVTVKEALVVRGAEGSVGPLRTPEEPLPSPKPKPQDLPCDKAESTNIGK
STVV
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagagtctctggactcgtccatccagagcgctctctccgccctcttcccaccg
ttcgaggtgacggctcccaccgtcctcagtcagctgtttcggctcattgaggaacgttat
tgcggcgatgcgctgcagtgtctgctggacttcctcatcccctccaaacacctgctggag
agcgtccaacaggcagcatgcgctggatactctgacgtggttttccgctgcgaaggctgg
cctctgtgtctccatgacaaaattgtcatccagttggcaccagtgaacccgctgctgctc
cgcccgggggacttctaccttcaggtggaacctttcggggaccaggcggtgcgcatcgtc
ctcaaaagcctcctggaggagggctgccgagaggtggaggagactcccatcctcgagacc
tcctacccctgcatgttcacagaagaatggctgcaggacctcaatgaaggacgccacggt
actccgctctcgcgctgcctgctttgcacggaccaaggagtggttaaattgccctgggct
aaaatcgccatcccagagtttctggacaagccgaagatcgtgccgatgtatcaagaacag
actcccgaaagaaagcacaagacggccccctcacatttcaactcctccacccttcctgtg
gaagccattttccatcccgcaaaggagctgatgtcagcatctctgagacctgtggactgt
ggcttcagaagaattccaaaatcccgctccaagccgttaatcaagcctgtggggtgggtc
tctcctaataactgggacagtccggagagctgtcgagagatagagggggattatgtggat
ctggtggacctcgccaaagggcaggaggtcccaggtaaaccaaacgatgaccagctgcaa
atgcctgtgttcaagcccgtcagaccacctcctccagtgccgtgtgggaacgggaccccc
tgtacgtgcacccttcagtatgatgaggctggacatgagctgactgaccaagacctaaac
tgcaggtacagagactcttatgcggcggcgctgagaaacccggtcgcatttaaaaagggg
agcgtcgaccacctctctgccctccaggaggggggcctgcctgatgaagcgctgccatcc
caaaatatctccagggcacaagatgaccagcttgaaaatgtttgcaaccactttaataag
cccttaaataatgagccccatcagcacagacggtctcaaacaaggcgggaaagcatcgaa
gcagcacaggcaaacatagaagaacatgtcgattctgagaacgttatgaaggagccaccc
gtggttttgacctccagccctgggctgaggcatagtgagaaggtgaccatgaagctcatc
tccaaacaaccagatccgaatggcggcgtgaccttggaggagttccttgagaacaatcaa
ccccatcagactgcagaagccacgagaccacctggaaaacagcacgtgaaggtcaggtct
ttgtccactgtctccgagacttctaaaggaagtccactcctctataaactcagcagccgg
agccacagtgacgtctgtcctgacaccatcagtagcgtgatgcaattaaagaaaggtgag
ctgctggaccagatgagccagaaacaggaaagacggaagtcccctcgaaaagaacttctg
ccaagcaggagtgaatctccctctgttgtgaatggaccagtctccaaactccacaactca
aagacagaaagaccatcgtcttcacttcacagatttgaagctcaaaattcttcccagtcc
ggacagccaagtttcagaagcatcagtggtctccttgaacttggaatcatttgtttacca
gggagcagggacaggacaggaaggtccgttgtggaggtccacggtgacaggaaagagtgg
gcatcccctctggtgtcagcccagaatgtctgtgaattactgctgtacctgagctccatc
ccacggaaagaaattagagagctgggaatgactttggtgatcaatgccaggaagaagtct
cctccgcttcacctctacaaagctctgctgatggcccaggagcaagctctgcatgctgtc
cacagtatcgtgacgctggtggataaagacacttgtccccgacctgaaaaacatccaggg
ttacagatggatctggtgacctccatgaaagctctaaacaagacagtcgaagcttcgcag
ttgacgtccgacctgggaggaagcttcgcctacagccatgccgactggctgcagttccat
cagaggctggtttctttcatggctgacctgcgagaggcggacagcttgttgcagagggcc
atcgagaaggtcgacgagcgcagtaaactggacactgcccaggaggtgcagcagtgcatc
gaggagcagaggtgttcgatgaaagaggtgctggaagatgctcgactggttacgctgcag
agagaaggaggggccgtgctggccaggatgaggagagaggacttccgatttccacagtct
gaggactacagagacgccctggagtcggccaccgctctgtataaccaggtggaggagaag
cttcacacgctggtgatgagatcaaacgagtctctgcagcaactccatttcctcttcagg
ctcagagagatggaggccaaaatcagcacggttgggatgtggttgaattcagagggagaa
caaatgctggaggactcagacacgtcagactccctggggggtgctgaaaaggccctgcag
cactacgatctgttgctcactcaggcaaaggagaaacagcagtacgctgtgagcctggtc
acagaggctgaggaaattgttggcttgggttgttcttgtcctgcgacagacatttttggg
actctggtcagaacttttaaatctgacatggatgatttcatgttgcgggcagaacagagg
cacaaagagctggaaacggtgctacatgtgcacagcttctgcgcccaggcatctgcactg
gccaaggaatgcagtcattttttagagaaggtagagcagaggtgttactcagcttcgact
cagagcaccctgcagatgtttgaagagaaattaggtggtgaattctccaccctgaacttc
caggctgtgaaagctaaggcctgcgccgtgggctcaggggctgggggggcaatgaaagcg
tggaatgcagcctgggtgcagtgccagcaactcaggcagcatctccacaaaatgaaagag
atccaacagatcacagctgcacaccctcaacccgaggacgtgggagtggagaagacggag
gaagggagtgatggtcggcagctgaactgtcagaaagacaatgtccaactctgcgaacat
gaaggaggagaaagtaccatcgccacaagcctccaccagtgtttgaaaccagagctgact
ggaaatttacctcacgccacggtccagtgtgcagcttttccacataatagccggaggcca
agggagcaccacagtgaagcagatctgaggaccgtagatccggcggaaggggacagtggt
tgtcctgcacgccaacatctgggtcgctccctgagtgaggggtcacaggctggctgccag
ttgccgagcagctttatacctttaaacgtgaggaacaaacattgccaaagcaggacgcag
ccgctgcagcgcaacctgcatcccgtccacaaactgcctggttgccataacaacagtggg
tcggggcacctcagatccaagagcgatggtaaagatgagtattgtgagggatgcgcagtt
tccagcggggtccctcgagctttgactccagagacgtcgcccacatcaacggcgaacatc
agcaataatttgaaactgcagaagatcatggaggagctgctgaccacagagagggagtac
gtgagcgccctgggttacgttcgagatcactacttccccgaactcgagagggccgacgtt
cctcaagacctcaggggccagagggggatcatcttcggcaatttagaaaagctccacgac
ttccaccagcatcatttcctcagcgagctggagggctgcgtgaacgagcccttcagagtg
ggacgctgcgtcttacgacacaaagagagctttgctttgtatgctctgtacagcaagaac
aaaccacagtcggatgctcttttcatcagtcatggacaatctttcttcaagcaaaagcag
ctgaaactgggcgataaaatggacctgtggtcgtacctgctgaagcccgttcagcggatc
agtaaatacagtctgctcctgcaagacatgatggcagattgtgggccaggacaatccaga
gagatggccgaggtcaaagccgcactggaggtcatccatttccagcttcgccatggcaac
aacctcttggccatggacgccatccagcactgtgatgttaatctgaaggagcagggtcag
ctgatacggcaggatgagtttctggtcacattcaggaagaaaaaatgcttccgtcacatc
tttctcttccaagaactcatcctctttagcaagacccggaagaccgaggtcgggaatgac
acgtatatctacaagcaatcatttaagacaacagatataggcctgacccagaacagcggc
gacaccggcctgtgcttcgagatctggttcaggaagaggaaaactcaggacacgtacacg
cttcaagcggttagccgggcggtgaaggaggcctggaccagggacctggagcggatcctg
tgggagcaggcagttcacaaccgagagatcaggatgcaggagagagtgttcatgggaatc
ggaaacaagcccttcatggacatccagcccagcgatgcagctatcagtgacagagccgtc
aactgtgtgctgataggacgagacaacaagctgctctcctctgcaggatcgtcacgtggt
gttgaggacgggcttcctggaggtcggcccaagtctctcggttcaggaagcacttcttct
tcctcctcgtcctcgggcatcggttctctgtcccctgtgggatacctgtgccggcccaag
aggagggtggcttcaggaggcatcggaggatacgtgtcccctcccggagctctggaggaa
gatgacctggaccagggtagtgtggttcacaacttattattggacagttcggagtcttct
ggggagagcgtgagcggcttcagcagctccagcctcagctaccactcagccatcggcgga
gaggcggaggacgcgggctcggtctgcggctccacagtcaccgtcaaggaggcgctggtt
gtccgtggcgctgaaggctctgtaggtcctctcagaacgccagaagaacccctcccgtca
cccaagcctaaaccacaagaccttccctgtgacaaggctgagagcacaaacattggaaaa
tccactgtggtttga
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integrated database retrieval system
