Takifugu flavidus (sansaifugu): 130523957
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Entry
130523957 CDS
T09160
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130523957 (ddx27)
03009 Ribosome biogenesis [BR:
tfs03009
]
130523957 (ddx27)
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130523957 (ddx27)
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130523957 (ddx27)
Ribosome biogenesis [BR:
tfs03009
]
Eukaryotic type
Pre-60S particles
Helicases
130523957 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-GeneID:
130523957
NCBI-ProteinID:
XP_056885583
LinkDB
All DBs
Position
4:26289..32442
Genome browser
AA seq
754 aa
AA seq
DB search
MIEQLGLIGTIRDEEQSPEEADTESEQEDEPIILNRKKKFGSGGSKDFNSGFEFGERDCL
TDETWVMSDVMSQLKKKRSLTTLDQKIEKIRKKRKADEKASGSLPPECSTGNSQDEGEEV
EEAHDDSDANSEEEEEEFDSGDEEILTKSDTLRDKQQRARKKKGEEEGPESFFEDASQYN
DQLTFDDMNLSRPILKAITALGFKQPTPIQKACVPVGLLGRDLCACAATGTGKTAAFVLP
VLERLVYKPRTSQVTRVLVLVPTRELGIQVHAVTRQLAQFTSITTCLAVGGLDLKSQEVA
LRAGPDVLIATPGRLIDHLHNTPSFELSHIEILILDEADRMLDEYFEEQMKEIIRLCSYN
RQTMLFSATMSEEVKDLAAVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREAVVA
ALLTRTFQDHVMCFTQTRKQAHRLHILLGLMGLKVGELHGELSQNQRLENLRRFKDEQID
ILVATDVAARGLDIDGVKTVINFTMPSTVKHYVHRVGRTARAGRSGRSVSLVGESERKIL
KEVVKSAKTTVKARVLPAEVILKFRDLISKLEKDVEAVMKLEREERELAASEAKLSVAQK
KLDGSATSTQSQRVWFQTQQERKQSRLSKALQEFDLALRGKKKREKFLKDSKRKKELTPE
ERAHFEILKAQMFAERAAKRERRPKRARVMVEEETSAAANHKVKAKGRKSVFDQELTNTN
RKSLKNYRAGPSFTEKKRLQFDRKNPRNSRYKKK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgatagagcagcttggactgatcggaacaatccgggacgaggagcagagtccagaagag
gccgacaccgagtctgagcaggaagatgagccgatcatactgaacaggaagaaaaagttt
gggagtggagggtcgaaagacttcaacagtgggtttgagtttggggagagagactgtctg
accgatgagacctgggtgatgtctgatgtgatgagccagctcaagaagaagaggagtttg
accactctggatcagaagatagagaaaatcaggaagaagaggaaggctgacgaaaaggca
tctggaagtttgcctcctgaatgttctacaggaaatagccaagatgaaggtgaagaagtg
gaagaagctcatgatgacagtgatgctaattcagaggaggaggaggaggaatttgattcg
ggtgatgaggagattctgaccaaatcagacaccctccgagacaaacaacaacgggcaagg
aagaagaagggggaggaggagggtccagagtcattctttgaagatgcatctcagtacaat
gatcagctgacctttgatgacatgaacctctccagacccatcttaaaggcgatcacagct
ctgggctttaagcaaccgacgcctatccagaaggcctgtgttcctgttggccttctgggt
cgagacttgtgtgcttgtgctgctaccgggacagggaagacggcagcattcgtgttgcca
gtgttggagcgtttggtttacaagccgagaacatcacaagtcactcgagttttggttctg
gttcctaccagagagttggggatccaggttcacgctgtgacccgtcagcttgcccagttc
acctccatcaccacgtgcctggctgttggtggattggacctaaaatctcaagaggtggct
ctgagggcagggccagatgttctaatagcgacacctggcaggctgatcgatcatcttcac
aacacacccagctttgagctgagtcacattgaaatcctgatcctggacgaggctgacaga
atgttggatgaatactttgaggagcagatgaaggagatcatcaggctgtgttcctacaat
cgacaaacaatgttattctccgccacaatgtcagaagaggtgaaagacctcgcagcagtt
tcactgaagcagccggtcagaatctttgtgaacagcaacactgacgtagcaccgtatttg
cgacaagagtttgtgagaattcgtccaaacaaagagggtgacagagaagctgtggttgct
gctctccttacaagaacatttcaggaccatgtgatgtgtttcactcagaccaggaaacaa
gctcacaggctgcatattttgttgggactgatgggactaaaggttggagaattgcatgga
gaactgagccagaaccagaggctggagaacctcagacgttttaaggacgaacagattgat
attttggtggcaacagatgtggcagcgagaggtctcgacattgatggagtcaaaacagtg
atcaacttcacgatgccgtctacggtgaaacactacgtccaccgtgttggacgaacagcc
agagcaggtcgctctggccgttccgtttccctcgtgggggagtctgagaggaaaattctg
aaggaggttgtcaagtcggcaaaaaccactgtcaaagctcgagtcctgccagcagaagtc
atcctgaaattcagagatctgatttcaaagctagagaaagatgtggaggcggtcatgaag
ctggagagagaagagcgagaactcgctgcatcggaggcaaagttgagtgtagcccagaag
aaactagatggttctgctacatcgactcagtctcagagagtttggtttcagacccaacag
gagagaaaacagagccgcttatccaaggcgctacaggagtttgatctggccctgagaggg
aagaaaaagagagagaagttcctgaaggacagcaagaggaaaaaggagttgacgcctgaa
gagcgcgctcatttcgagatcctgaaggctcagatgtttgctgaacgggcagccaagaga
gagcgacggccaaagagagcaagagttatggtcgaggaggagacaagtgctgcagctaac
cataaagtaaaggccaaaggaagaaagtcggtatttgatcaagaactaaccaacacaaac
aggaaatctctgaagaactacagagcgggaccttcattcacagaaaagaagcgtcttcaa
tttgacaggaaaaatcctcgcaattccaggtacaaaaagaagtaa
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