Takifugu flavidus (sansaifugu): 130523962
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Entry
130523962 CDS
T09160
Symbol
tsen2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2 isoform X1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfs03016
]
130523962 (tsen2)
Enzymes [BR:
tfs01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
130523962 (tsen2)
Transfer RNA biogenesis [BR:
tfs03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
130523962 (tsen2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Collagen
tRNA_int_endo_N
AGAO-like_N2
Motif
Other DBs
NCBI-GeneID:
130523962
NCBI-ProteinID:
XP_056885590
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All DBs
Position
4:184197..189250
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AA seq
469 aa
AA seq
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MQADFRPPKRRNRIQEEYGGALPVRCRPGESGRPGDSGRPGDSGRPGESGRPGDSGGPGE
SSELRAELINQHVLVCHPEHIKKIHNQVGSTIRSILLFHQLSLNMLFFTSVTSLTHYAKG
YLGKGVLSRARPEHSISERWEEHEGLFLPVITPSRYKDLLDWVEAILSAQGLDQQAVRRA
LLRLSEPVKMENIRPETGGEDRAGGSEMELERTGCSRRLTNSSAANGKKTQQFFCSLDPC
PHPTSDQDSEGDPEPDPGLYVSVPGPGFVLVSSDIEICGELRRSPLSLTEYLQLSLEEAF
FLVYSLGCLCVYLDQTVCVIGQEPLSILQLWRNFCSLRTDFISLFAAYQHFRSKGWIPKG
GSGAKYGVDFLLYRKGPPFYHASYSVVVERVHNSYSGPGMRLFSWRSLAALSRITANVSK
ELMLCYIIYPDDLSDDELRSPECLSRLKVQEIIVSRWVSSRERVEHDDV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgattttcgcccgccgaagagacgaaatcgaattcaggaggaatacggaggt
gcgctgccggtgcgctgccgcccgggggagagcggccgcccgggggacagcggccgcccg
ggggacagcggccgcccgggggagagcggccgcccgggggacagcggcggcccgggggag
agcagcgagctgagagcggagctcatcaaccaacatgttctcgtctgtcacccggagcac
atcaagaagatccacaatcaggtcggatccacaatcaggtccattcttctgttccaccag
ctcagtttaaacatgctgttcttcacttctgttacatcattaacacattatgcgaagggt
tatttgggtaaaggcgtcctgtccagagcccgaccagaacacagcatctctgagcggtgg
gaggagcatgaaggtttgttcctgccagtcatcacaccctccaggtacaaggacctgctg
gactgggtggaggccatcctgtctgctcaaggactggaccaacaggctgtcaggcgggcc
ttgcttcgactgtctgaaccagtcaagatggagaatattaggccagagactggaggggag
gatcgagcaggtggatcagagatggagcttgagaggacagggtgttccagacgcttgaca
aattcttctgctgcaaacgggaaaaaaacccaacaattcttttgcagtctggatccatgt
cctcaccccacctcagaccaggactccgaaggtgaccctgaacctgatccaggtctctat
gtttcagttccaggtcctgggtttgtccttgtttcctctgacattgagatctgtggcgaa
ctgcggcggtcaccactgtccctcacagagtacctgcaactcagtttggaggaggccttc
ttcctggtctacagtctgggctgcctctgtgtttacctggaccagaccgtctgtgtaatt
ggccaggagcccttgtccatcctccagctgtggaggaacttctgctccctgcggacggac
ttcatcagcttgtttgccgcctaccagcactttcgaagcaaagggtggatcccgaaggga
gggagcggtgccaagtatggtgtagacttcttgttgtacaggaaaggacctccattttac
cacgccagttactcggtggtggtcgagcgggtccataactcgtacagtggccctgggatg
cgtctgttttcgtggcgttctcttgcagctctgagtaggatcacagccaatgtttccaag
gagctgatgctgtgttacatcatttacccagacgacctgtcggatgatgagctccgctca
cctgaatgtctgagtcggctaaaggttcaggaaataatcgtcagcaggtgggtgtcctcc
agagaacgggttgagcacgacgacgtctga
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