Takifugu flavidus (sansaifugu): 130524128
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Entry
130524128 CDS
T09160
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130524128 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130524128 (bard1)
04121 Ubiquitin system [BR:
tfs04121
]
130524128 (bard1)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130524128 (bard1)
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130524128 (bard1)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
130524128 (bard1)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130524128 (bard1)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
130524128 (bard1)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
130524128 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
zf-RING_6
Ank_2
Ank_5
Ank_3
Ank_4
BRCT_2
BRCT
Ank_KRIT1
zf-RING_5
zf-RING_10
zf-RING_UBOX
PTCB-BRCT
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
130524128
NCBI-ProteinID:
XP_056885920
LinkDB
All DBs
Position
1:complement(7755802..7766920)
Genome browser
AA seq
791 aa
AA seq
DB search
MDAYVNEQTSDWKNTKEAVANFRRLLLCSKCSELMKEPVCLGMCEHVLCRSCAGPQAGDG
CVVCHRPAWVKDIQINRQLSSIIQVFSNLESLLKPTEQPDCSPDNTKAEPEHSVFKQKKN
LKIWFSPRSRKVRCLVETPSEVTSPESGSKRGAGPAMSANNSAQPGDMSIFNFTSSSQDS
GSSSPPNSKNKSSNKKRSAKKNASSRDMVQCASRSRRKPTKETMKKNKLEAINQRWGITG
ETDSPNKKGQACVEGVRRSTKRVSFLSPAVTSDDPQLEVPQASNNDHRPDTDTVKGNLSE
NNSVLNEQTQSSQNISPSVIRSEAPSVICPSFGDSPAKRDYVSPLKRPSETCKADGKVTT
LESTPKRPRVSPARGRKSQLSPTVLNPPSSASPGCDKKKIYSGRQQCQSPPVHRSPLSQR
SASGSPAVLKRNHKGETPLHIASIKGDAEAVKELLDQGADPNIKDNAGWTPLHEACNLGH
LGVVEVLVSGGALLNTPGYENDSPLHDAVRNGHLAIAQLLLQLGASANVLNLYGKRPADY
AVSLEMREIFQNASDGMATSLSPSASLSVVSGSVRREEIVLLATRLSQPEQQQLVRLGKL
LGGRVADTFSASVSHIVVPEGQMCTTLSTLSGLLAGCWVVKHSWVKTCLQAGKWMPEAEH
EAGEGPQRSRINRCSLLPPLFDGCFFFLLGSFKSPSKDELARLLREGGGQLLSRRPKPDS
DVTQTVSAAAYHAPPGSDQALCTQYVVFDPRGRHRPEVGRRGKVWSAPSTWIIDCIAAFS
LLPVPDPQTLD
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctatgtcaacgaacagacaagtgactggaaaaacaccaaggaagccgttgcg
aatttccgacgattgctgctttgctctaaatgctcagaattaatgaaggaacctgtgtgt
ctgggaatgtgcgagcatgtgctgtgcagatcctgtgctggcccccaagcaggagatggc
tgtgtggtgtgccaccgtcctgcatgggtcaaggacatacaaatcaacaggcagctaagc
agcatcatccaagttttctctaatttggaatctctgctcaaacccactgagcagccagat
tgctctccagataacactaaagcagaacccgagcactctgtctttaaacaaaagaaaaac
cttaagatctggttcagcccccgcagtcgtaaggtacgctgtctggtggagacaccctca
gaggtcacttcaccagaaagtggatctaagagaggggcgggaccagcaatgtcggccaac
aattctgctcaacctggggacatgtcgattttcaatttcacctcatcttctcaagattcg
ggctcatcgtcccctccaaattccaaaaacaaaagcagcaacaagaagaggtcagctaag
aaaaatgcttctagcagggatatggtgcaatgtgccagcaggtccagacgaaagccgacc
aaggagacgatgaaaaagaataagttggaggccataaaccaacgatggggcattacaggg
gagacagattctccaaataagaagggacaagcctgtgttgaaggtgtgaggaggtccact
aagagggtttccttcttaagccctgctgtcacatctgatgatcctcagctggaggtacca
caggccagtaataatgaccacaggcctgacacagacaccgtgaaggggaatctctcagaa
aacaactcagtcctgaatgagcaaacgcagtctagtcagaatatttcaccaagtgttatc
aggagtgaggcaccatctgtcatttgccccagctttggtgatagtccggccaagcgcgac
tacgtttctcccttaaagcgtccctcagaaacatgcaaagccgatggcaaagtcaccaca
ttagagagcactccaaaaaggcccagggtctcaccagccagggggagaaaatcacagctc
tctcccaccgtactcaacccgccttcttcagctagtccagggtgtgataagaagaaaatc
tattctggacggcagcaatgccaaagcccacctgtccataggtctccattgtcccagcgg
tcagcatcaggaagtcctgcagttttaaagaggaatcacaagggagagacgcctctgcac
atcgcttcaataaagggggatgccgaggctgtgaaggaactgttggaccagggggccgac
cccaacatcaaggataacgctgggtggacacctctgcatgaagcgtgtaacctgggacac
ctgggggtggtggaggtgctggtgtctgggggagccctgctgaacacgcctggctatgag
aacgactctccccttcacgatgcagttcggaacggacatcttgccatcgcccaactgttg
ttgcagctcggcgcctcagcgaacgtacttaatctctacggaaagcggcctgcagattat
gctgtcagcctcgagatgcgggagattttccagaatgcctcagatggaatggcaacatct
ctgagtccctcggccagtctctctgtggtgagtgggagtgtgaggagggaagaaatagtg
ctcttggccactaggttgtcgcagcccgagcagcagcagctggtcagactggggaagctg
ctgggagggagagtggctgacaccttttctgcctcagtgagccacattgtggtgcctgaa
ggacaaatgtgcaccaccctctccaccctctcgggtctgcttgctggctgctgggttgtc
aaacacagctgggtgaagacgtgtctgcaggcaggaaagtggatgcctgaagcggagcac
gaggcaggagagggcccgcagcgcagccgcatcaacagatgcagcctgctgccgccgctc
ttcgacggctgcttcttcttcctcctcgggtcttttaagtcgccatccaaagacgagctc
gccaggctcctcagggagggaggaggtcagctcctgagccgacggcccaagcccgacagc
gacgtgacgcagacggtgagcgcggccgcctaccacgcaccgccgggctccgaccaggcc
ctgtgcactcagtacgtggtcttcgacccgcgggggcgtcacaggccagaagtggggaga
cgggggaaggtgtggtcggctccatccacatggatcatcgactgcatcgcggccttctcc
ctccttcctgtgccggaccctcaaactctggactaa
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