Takifugu flavidus (sansaifugu): 130524285
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Entry
130524285 CDS
T09160
Name
(RefSeq) integrin alpha-5-like
KO
K06484
integrin alpha 5
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03266
Virion - Herpesvirus
tfs04145
Phagosome
tfs04510
Focal adhesion
tfs04512
ECM-receptor interaction
tfs04810
Regulation of actin cytoskeleton
tfs04820
Cytoskeleton in muscle cells
tfs05100
Bacterial invasion of epithelial cells
tfs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
130524285
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130524285
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130524285
09144 Cellular community - eukaryotes
04510 Focal adhesion
130524285
09142 Cell motility
04820 Cytoskeleton in muscle cells
130524285
04810 Regulation of actin cytoskeleton
130524285
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130524285
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130524285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfs04147
]
130524285
04515 Cell adhesion molecules [BR:
tfs04515
]
130524285
04090 CD molecules [BR:
tfs04090
]
130524285
Exosome [BR:
tfs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130524285
Cell adhesion molecules [BR:
tfs04515
]
Integrins
Integrin alpha subunits
130524285
CD molecules [BR:
tfs04090
]
Proteins
130524285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
DUF11
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
130524285
NCBI-ProteinID:
XP_056886263
LinkDB
All DBs
Position
4:complement(1345476..1367192)
Genome browser
AA seq
1053 aa
AA seq
DB search
MDIVRGLFSCRPRGGCCRRAVWCVPVVALLLRLCAAFNLDEQQRVVFSGQRGSYFGYSVE
FFNNSSSFSILIGAPKANTSQPDIVEGGAVYLCPWSQTNCSIVNFDTEGDRYFYINDVNT
QVEFKSRQWFGATVRSHGNRILACAPRYYWRTEHNTPFADVTGTCFLSVDSLKTFVEFAP
CRTERHGPAGQGYCQGGFSADFTKDGRVVLGGPGSFYWQGQLISATTEEIVKAYYPSYFL
LSVDGQIQTRQVQGSYDDSYLGYSVAAGEFSGDGEEDFVTGVPKGLMLYGLVSVLSGRDL
KSLINLTGEQMGSYFGYAVAATDINNDGLDDLLVGAPMFMRHGSSCRLEELGKVYVYLQK
GPLLLEPSQSHLMGKQAYGRFGSSLAPLGDLNQDGFNDVAIGCPYGGDDQQGLVLIYNGR
SGGLMDTPTQTLSGQWAFSSFPANFGFALRGNTDLDHNGYPDLIVGAFGVDKAVLYRARP
IVSVSASLTVQPTLFNQEEKTCELLTGTGPIAVSCINVNFCLLANGKHLPPHLAFVVELQ
LDSVKPSQRESVRRTLFLDSQQPSLLKNFSLSDGGRSCHDTQIYLRAEDEFRDKLSPIYV
SLNFSLDPQASVDQHGLRPVLNYNTEQQIQQKVQIQLDCGEDNICVPDLKLAVYGDRSEV
YLGEENAVTLTFNARNEGEGGAYEAELYVALPSEADYSGILRNNGNFTQLTCSYEAENQT
RYLVCDLGNPMKSGTSLWAGFRFTVPRLRDTYKTVMFELQIRSKNANNSESEVVPYELEV
AAMARVILQGVSHPDKLFFPPPNWSLSQSLREEQDIGPELQQIYELVNNGPSAFSQATLE
VRCPLRAQGHPLLYPVEVVTEGPLSCSSKHLNTLKLKLRPAAADGPMLVKSRREHQIQRR
ELHAEILAEHGNLTCPLVECWQLQCHVGLLERGSSVILKVRSRVWAETFIERPYKHYLLE
CSVHFAVDKMPYSIPPKFKSSGSGKVVAAVTWKRTDSLFFVPVWIIILAVLAGLLLLALL
IYLLYKMGFFKRSDPYGTTMEKAQLKPQASSEA
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggacatagttcgtggacttttctcttgccggccccggggtggatgttgtcggcgcgcc
gtgtggtgtgtacctgtagtggcgcttctgctgcgtctttgcgcggcgtttaacttggat
gagcagcaacgcgtcgttttcagcggacagcggggaagttatttcggctactcggtggag
tttttcaacaactcatccagtttcagtattttgatcggtgctcccaaggccaacaccagc
cagcccgacattgtggaaggaggagctgtgtatttgtgtccgtggagccagaccaactgc
agcattgtcaactttgacacggaaggtgatcggtatttctatataaatgatgtgaacact
caggttgagttcaagtcccgtcagtggtttggtgctacagtccgttcccatggtaaccgc
atcctggcttgtgctcccaggtattactggaggaccgaacacaacacaccttttgctgat
gttactggaacgtgcttcctctcagtggacagcctgaaaacatttgtggagttcgccccc
tgccggacagaacggcatggacctgctggacagggctattgtcaggggggctttagcgca
gactttaccaaggacgggagggtcgtgctcgggggacccggcagcttttactggcaaggt
cagctgatatcagccaccacagaggagatcgtcaaagcctactacccatcctacttcctg
ctctctgtcgacgggcagattcagaccagacaggtgcagggcagctacgacgacagttac
ctaggttactctgtggctgctggggagttcagcggggatggtgaagaagatttcgtcaca
ggagtcccaaaaggactcatgctgtatggtttagtgtccgtgttaagtggaagggatctg
aagtctctgatcaacctcacaggggagcagatgggctcctactttggctacgcagtggca
gcaactgacatcaacaacgacggtctggacgacctcttggtgggagctcccatgttcatg
cgtcacggatccagctgccgcctggaggagctgggtaaagtttatgtgtaccttcagaag
ggcccgctgctgctggagcccagtcagtcccacctgatgggtaaacaggcgtacggcagg
ttcggcagctcgctggctccgctgggtgacctcaaccaggatggatttaatgatgtggcc
attggctgcccctacggaggagacgaccagcaaggactggtcctgatctataatggccgt
tctggaggcctgatggacacccccactcagaccctctctggccagtgggctttcagctct
ttcccggccaacttcggctttgccctgcggggcaacacagacctcgatcataacgggtac
ccagatctgattgttggtgcgtttggtgtcgataaagcggtgctctacagggctcggcct
atcgtgagcgtcagtgcgtccctgactgtgcagccgaccctgtttaaccaggaggagaag
acctgcgagctcctcactggaacgggccccatagctgtgtcttgcatcaacgtcaatttc
tgcctgttggctaatgggaagcacctccctcctcatctagcctttgtggtggagctccag
ctggacagtgtgaagcccagtcagagggagtctgtcaggagaactctcttcctggacagc
cagcagcccagtttgctgaagaacttcagtctctctgatggaggccgctcgtgtcacgac
acccagatttatctcagggctgaagacgagtttcgggataagctctctcccatttacgtc
agccttaatttcagtttggatcctcaggcgtcggtggaccagcacggcctcagaccggtc
ctgaattataacacagagcagcagatacagcagaaggtccagattcaactggattgtggg
gaggacaacatctgcgtccctgacctcaagctggctgtttacggtgaccgttcagaagtt
tacctgggtgaggaaaacgccgtcaccctgaccttcaacgccaggaatgagggagagggc
ggggcttatgaggcggagctgtacgtggcgctgccatcggaggccgactacagcgggata
ttgcgcaacaacgggaacttcactcagctgacctgcagctacgaggctgagaaccagacc
cgctaccttgtgtgcgatctaggaaaccccatgaagtctggtaccagtttatgggctggc
tttcggttcactgttcccagactgagggacacctacaagactgtgatgtttgagctccag
atacgaagtaaaaatgcaaacaactcagagagcgaggtggtgccgtacgagctggaggtg
gccgcgatggcccgggtcattctgcagggcgtgtcccatccagacaaactcttcttcccc
cctccgaactggagcctcagtcagagtctgagggaggagcaggacatcggccctgaactc
cagcagatctacgagctggtgaataacggccccagtgcgttcagccaggcgaccttggag
gtgagatgccctctgagggctcagggacacccactgctctatcccgtggaggtggtcaca
gaggggcccctcagctgctcctccaaacacctgaacaccttgaaactgaagctccgtcct
gcagcagctgacggtcccatgttagtgaaatccagaagggagcatcagatccagaggaga
gagctgcacgccgagatcctggctgaacacgggaacctgacctgccctctggtggagtgc
tggcagctgcagtgtcacgttggcctcctggagagaggatccagtgtcatcctgaaggtg
cgctccagagtctgggccgaaaccttcatcgagcggccctacaagcattaccttctggag
tgttccgtacacttcgcagtggacaagatgccttattccatccctcccaaattcaagtca
tccggatccgggaaggtggtggcggctgtcacgtggaaaaggacggacagtttgttcttt
gtcccggtgtggatcatcattctggctgtcctagctggcctgcttttactggccctgctc
atctatctcctctataagatgggctttttcaaaaggtccgatccatatggtacgaccatg
gagaaggcccagctcaaacctcaggcatcctctgaagcttag
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integrated database retrieval system
