KEGG   Takifugu flavidus (sansaifugu): 130524518
Entry
130524518         CDS       T09160                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    130524518 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfs03019]
    130524518 (wdr82)
   03036 Chromosome and associated proteins [BR:tfs03036]
    130524518 (wdr82)
Messenger RNA biogenesis [BR:tfs03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     130524518 (wdr82)
Chromosome and associated proteins [BR:tfs03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     130524518 (wdr82)
    COMPASS/SET1 complex (yeast)
     130524518 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_RIG_2nd WD40_RFWD3 NBCH_WD40 WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_SCAP MinC_C MIOS_WD40
Other DBs
NCBI-GeneID: 130524518
NCBI-ProteinID: XP_056886722
LinkDB
Position
4:8691351..8694184
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSTNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVTSLCMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGIKFSNDGKLILLSTNGAALRILDAFKGVVLHSFGGYNNSKG
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPICCLQFNPKYMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctaacggacaatgtgctgcggagcttcagagtcgctaaggtgtttcgtgaaaac
tcagacaaaatcaattgttttgactttagcacgaatggagaaacaattatttctagcagt
gacgacgactcgctagtcttgtatgactgccaagagggaaaacccaagaggaccctctac
agtaaaaagtatggagtggacttaatcaggtacacacatgctgctaacacggtggtctac
agttccaacaaaattgatgatactatccggtacctctcccttcatgacaacaaatatatc
cgctactttcctggacatagcaaaagggtgacgtctctatgcatgtctcctgtggatgac
acatttatttctggctcactggataaaactatcagattgtgggatttaaggtcgcctaac
tgccagggactaatgcaccttcaggggaagccggtgtgttcctttgacccggaaggtctc
atttttgctgctggaatcaattcagaaatggttaaactttatgatttgaggtcgtttgac
aagggtccctttgccaccttcaagcttcagtacgaccggacctgcgagtggacgggaatc
aagttcagtaacgacggcaaactcatcctcctttctaccaacggggcagcccttcgcatc
ttggatgcttttaagggtgtggtgctgcattcctttgggggctacaacaatagtaaaggc
gtaacattggaggcatcctttacaccagattctcagtttgttatgattggctctgaggat
ggaaagatccatgtgtggaacgcagagagtggtatgaaggtggcgttgttagatggtaaa
cacacaggacccatctgctgcctgcagttcaaccccaagtatatgacgtttgcaagtgcc
tgttccaacatggcgttttggctccctacaattgacgactga

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