Takifugu flavidus (sansaifugu): 130524527
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Entry
130524527 CDS
T09160
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a isoform X1
KO
K14966
host cell factor 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03083
Polycomb repressive complex
tfs04980
Cobalamin transport and metabolism
tfs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130524527 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
130524527 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130524527 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfs01009
]
130524527 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130524527 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
tfs03029
]
130524527 (hcfc1a)
Protein phosphatases and associated proteins [BR:
tfs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130524527 (hcfc1a)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
130524527 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
130524527 (hcfc1a)
MLL-HCF complex
130524527 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130524527 (hcfc1a)
Mitochondrial biogenesis [BR:
tfs03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
130524527 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
130524527
NCBI-ProteinID:
XP_056886734
LinkDB
All DBs
Position
4:2537113..2550147
Genome browser
AA seq
1791 aa
AA seq
DB search
MNLDYCCTIRLHASVFGLTAPKKVIMSATGTTASVLQPRWKRVLGWSGPVPRPRHGHRAV
AIKELMVVFGGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGG
MVEYGKYSNDLYELQASRWEWKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDS
EDPKNNIPRYLNDLYTLELRAGSSVVGWDIPITYGVLPPPRESHTAVVYTDKASRKSRLI
IYGGMSGCRLGDLWTLDIDTLTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMD
DVKVATHEKEWKCTNTLACLNLDNMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSG
RDGYRKAWNNQVCCKDLWYLETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQK
YDIPATPAAASPAMSATSSLPVNSPKSPAPAAAAPSAQSLPQTAVLKVAAQQSATGASVV
TVRPSQPIKSPVTVTSLPPGVRMVVPAQSTQGTPIGSSPQMSGMAALAAAAAATQKIPPS
SAGTVLNVPAGATILKTVAVTPGATTMKVASPVMVSNPATRMLKTAAAQVGTAAAASPTT
TRPIITVHKSGTVTVSQQAQVVTTVVGGVTKTITLVKSPLAMGGSGAMISNLGKMMSVVQ
TKPVQTSAVTGQASTNPLTQIIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKP
TILNISGVSPTTTKQGTTIIKTIPMSAIMTQPGATGVTSSTGIKTPITILTTKVMTTGTP
GKIITAVPKLATAAGQQGLTQVVLKGAPGQPGTILRTVPMSTMGGVRLVTPVTVSAVKPT
VTTLVVKGTTGVTTLGTVSGTVSTSLAGNTVDSSNASLVTPITTLGTIATLSSQVITPSA
MTVSAAQTSLTSASTLPSSTMTVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQP
SSTEAGAAGDGSGTVTLVCSNPPCETHETGTTNTATTSSATMGAGKVCSNPPCETHETGT
TNTATTSSATIGAGKVCSNPPCETHETGTTNTATTSSATIGVGKVCSNPPCETHETGTTN
TATTSSATIGAGKVCSNPPCETHETGTTNTATTASSNMSALRVCSNPPRETHETGTTNTA
TTASANIGQPQQVCSNPPCETHVTGTTNTATQSSSNMNTSLTGTTQRVCSNPPCETHETG
TTNTPSTATSSMGGEQTSTVTGIVQQECSNPPCETHETGTTNTATTATCSMETTEGTATQ
QTEGEAKAASNTEVVATTAATDIVTTTQGRAITTVTQSTPAPGPSVPLISSITEGVSTAE
SSTEEPMQTDETPSAESAPAAEEAAAAVAMEAQAEGETAAAAALNLPSELMTEGQGATLM
VTGLSDEELAVTAAAEAAAHAAATEEAQALAIQAVLQAAQQAVMSEGDSTAETQQPTNIP
IMLTQQELAALVQQQQLQEAQAAAQQASVGTSLPTEGLAPADSLNDPSVESNGHNEMAAA
VTSAVASLLPCATAETLAPSSTFAPVVSVASPAKLQAAATLAEVANGIEGEKQDPQPAPV
KPAVKKENQWFDVGIVKVTNMVVTHFYVPADDSHGDDDSGVVPDYAQMKKMELQPGTAYK
FRVAGINACGRGSFSEISAFKTCLPGFPGAPCAIKISKSSDGAHLTWEPPSVTSGKIIEY
SVYLAIQSNQTAEAKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIA
ARNEKGYGPATQVRWLQESGKDASSAKPAPKRPGTSPDAKATGPKKARTDQ
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggactattgttgcacgatcagactacacgccagtgtttttggacttactgca
ccgaaaaaagtgatcatgtctgccactgggaccacggcgtcagttctgcagccgcggtgg
aaacgggtcctcggatggtccggtccggttccgcggcccagacatggacacagagcagtg
gccataaaggagcttatggtcgtctttggtggtggaaatgaggggattgttgatgaacta
cacgtatataatacagctacaaaccagtggttcatcccagcagtccgtggcgatattcct
ccaggttgtgctgcctatgggtttgtctgcgatggcacaaggttgttggtatttggtgga
atggttgaatatggaaagtacagcaatgatctctatgagcttcaggccagcagatgggaa
tggaaaaaattaaaagccaaaaatccaaagaatggcccccctccttgtcctcgtcttggc
cacagtttttctctagttggcaacaaatgctacttgtttggtggactagctaatgacagc
gaggacccaaaaaacaacattcccagatatttaaatgatttgtacacacttgagctccgt
gctggttctagtgtggtaggatgggatattcctattacttatggagttctgcctcctccg
cgggaaagccacactgctgtcgtatacacagacaaggcaagcaggaaatcacggctgata
atttatggagggatgagtggctgtcgccttggagatctgtggactcttgacattgatacc
cttacatggaacaaaccttcagttagtgggacagctccgcttccaagaagtcttcactct
gccaccactatcacaaacaagatgtacgtttttggaggatgggttcctttagtaatggat
gatgtcaaagtggccacgcatgagaaagagtggaagtgcacaaacacccttgcctgccta
aatctcgataacatgtgctgggaaacagtgttgatggatactcttgaggacaacatcccc
agggcccgtgctggccactgtgctgtggccatcaattcccgactctacgtttggagtggc
cgtgatggttatcgcaaagcctggaacaaccaggtttgttgtaaagacctctggtaccta
gaaacagagcgtccacatgcccccgccagggtgcagttagtccgtgccaacacaaactcc
ctggaggtgagctggggtgccgtttcaacggctgacacctacttactgcagcttcagaag
tatgacatccctgcaactccagctgcagcttctccagccatgagtgcaacctcctcactg
ccagtaaactctcccaagagccccgccccggctgctgcagccccctcagctcagagttta
ccacagacagctgtgttaaaggttgcagctcagcagtctgcaacgggtgcatctgttgtc
accgttcgacccagtcagcccataaaatctcctgtcactgtgacatcacttcctccagga
gttcgaatggtagttcctgcacagtccactcaaggaacgccaattggttccagccctcag
atgagtggcatggcagctttagcagcagctgcagcagcaacacagaagatcccaccttcg
tctgcaggcacagttctcaacgttcctgctggtgcaactattctcaagacagtcgctgtg
actcctggtgctaccaccatgaaagttgcttctccggtcatggtcagcaacccagccaca
cggatgctaaaaaccgctgcagcacaggtgggcacagcagcagcagcatctcctaccacc
accagacccatcatcactgtgcacaagtcaggcactgtcacagtgtctcagcaggcccaa
gtggtaaccaccgtagtgggaggagttaccaaaaccattactctggttaagagtcccctc
gctatgggcggaagtggcgctatgatctccaaccttggcaagatgatgtctgtggtgcag
accaagccagtgcagacatcagctgtcacaggccaggcttccaccaaccctctcacacag
atcatacagacaaagggtccgctcccagccggcaccattttaaagctcgtgacttctgca
gatggcaagcctacaactatcattaccacatctcaggcaggaggaacaggaaataagccc
actatcctgaacatcagtggagtttctcctaccaccactaaacagggcaccacgattatt
aaaaccatccccatgtcggccatcatgacacagcctggtgctacaggtgtaacaagcagc
acaggcatcaaaacccccatcacaatccttaccacaaaggtgatgaccactggaactccg
gggaagatcatcactgcagtgcccaaactcgccactgcagctggtcaacagggtcttaca
caggtggtgttaaagggagctcccggccagcctggcaccattttgcggactgtaccaatg
agcacaatggggggtgtacggcttgtcacaccagtgactgtgtctgctgttaaacccact
gtcacaacgctggttgtcaaggggaccacaggtgtcaccacgcttgggacagtgagtggt
actgtctccaccagcctggcaggaaatacagtcgacagttccaacgcctctctggttacc
cccatcaccacactggggaccattgctaccttgtccagccaggtcatcaccccatccgct
atgactgtgtctgctgcccagactagtctaacgtctgcgtccacgctgccctcctcaacc
atgactgttcagaatcagcccacccaggtgactctaatcacaactccaagtggtgtagaa
gctcagccagtccaggatctaccagtgtccatcctggcttcacccacgtctgaacagccc
agctccactgaggctggagcagctggtgatgggtctgggactgtgaccctggtctgctca
aacccaccttgtgagacccacgagacaggaacaaccaatacagctacaacttcctctgct
accatgggagcaggaaaagtgtgttccaacccaccctgtgagacccacgagacgggaaca
accaatacagctacaacttcctctgctaccatcggagcgggaaaagtgtgctccaaccca
ccctgtgagacccacgagacgggaacaaccaatacagctacaacttcctctgctaccatc
ggagtgggaaaagtgtgttccaacccaccttgtgagacccacgagacgggaacaaccaat
acagctacaacttcctctgctaccatcggagcaggaaaagtgtgctccaacccaccctgt
gagacccacgagacagggactaccaacacggccacaactgcatcttcaaacatgtctgca
ctccgtgtatgctccaacccaccgcgtgagacccacgaaactgggacaactaacacagca
accacagcatcagctaatataggacagccccagcaggtgtgctccaatccaccctgtgaa
acccacgtcacaggtaccaccaacacagcaacccagtcctcctctaacatgaacacaagc
ctgacaggaaccacgcagagggtgtgctcaaacccgccctgtgaaacacacgagacgggg
accaccaacaccccgtccacggccacctccagcatgggaggtgagcagacaagtacagtt
acgggcattgtccagcaggaatgttcaaacccaccttgtgaaacgcatgaaactgggacc
accaacacagccaccactgctacctgtagcatggaaacaactgaaggaacagccacccag
cagacggaaggggaagctaaagccgctagcaacacggaggtagttgccaccactgcagcg
actgacatcgttaccaccactcagggcagggccatcactactgtcactcagtctactcca
gcccccggaccatctgttcctttgatttcatcgatcacagagggcgtgagcactgctgag
agctccacagaggaacccatgcagaccgatgagacgccatcagctgagtcggcacctgcg
gcggaggaggctgcggcagcagtggcgatggaggcgcaggcggaaggggagacggccgca
gcagcagcgttgaatcttccctccgagctgatgaccgaaggccaaggagccacgctgatg
gtgacggggctgtcggacgaggagctggccgtgaccgcagcggccgaagctgccgctcat
gccgcagccaccgaggaagctcaggcgctcgccatccaggccgtcctccaggcagctcag
caagccgtcatgagcgagggagattccacagcagaaacccaacagcctacaaacatccca
atcatgctgacgcagcaggagcttgcagcacttgtccagcagcagcagctgcaggaggct
caggcagctgctcagcaagcctcggtgggcaccagtctacccaccgagggcctcgccccc
gccgacagcctcaacgacccctccgtcgagagcaacgggcacaatgagatggctgccgcc
gtcaccagcgccgtggcctcattgcttccgtgtgccaccgcagagacgctcgctccatcg
agcacgtttgcgcccgttgtgtcggtggcgagtcccgccaaactgcaggctgcagccact
ttagcagaggtggccaacggcatcgagggagagaagcaagaccctcaaccagccccagtg
aaaccagctgtaaagaaagaaaaccagtggttcgacgttggaattgttaaagttacaaat
atggtcgtcacacacttttatgtgccagcggatgattcccatggagacgatgactctggt
gtcgtgccagactacgctcagatgaagaaaatggagctgcagcctggaacggcttacaag
ttccgtgttgcgggaatcaacgcttgtggccgcgggtccttttcagagatatccgctttc
aagacttgcctaccgggcttccccggagcgccgtgcgccatcaaaattagcaagagctcg
gatggtgctcacctgacctgggagccgccgtctgtgacgtcggggaagatcatcgagtac
tcggtgtatcttgccatccagagcaaccagacggccgaagccaaggcctccacaccagca
cagctagccttcatgcgggtatattgtggacccaacccatcgtgcttggtgcagtcgtcc
agcctctccaacgcacacatcgactacaccaccaagccagccatcatcttccgtatcgcc
gcccgcaacgagaagggctacggccccgccactcaagttcgatggctccaagaatctggc
aaagacgcttcctctgcgaaaccggctcccaaaagaccaggcacctcccctgacgctaag
gctactggtccaaagaaagcgaggacggaccagtga
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integrated database retrieval system
