Takifugu flavidus (sansaifugu): 130524690
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Entry
130524690 CDS
T09160
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfs01009
]
130524690 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130524690 (stau1)
Protein phosphatases and associated proteins [BR:
tfs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130524690 (stau1)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130524690 (stau1)
mRNA cycle factors
Stress granule specific factors
130524690 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
130524690
NCBI-ProteinID:
XP_056887006
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All DBs
Position
4:complement(9268577..9274937)
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AA seq
694 aa
AA seq
DB search
MSQLQYHCPASPMAAAPAPLPLGQPQPGYSIHCGSGTLPSESASQPVRSSALPAGSATPY
TTTTVPNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKIFSVRLTLGDQYWEA
EGPSIKKAQHSAAASALVETTLPKPTMRTPRNTNRIPVDGMTHTMELNALCMKLGKKPMY
KPIDPYPGMRPPNFHYNIRAPGPYQRSMQQYYYPFPPVGPMLYHMELSVGGQQFIGKGRT
RQLAKHDAAAKALKVLHKEPILQQVSVMNGEPEEENLNKSEISQVFEIALKRNLPVNFEV
LKEEGPPHMKSFVVRVTVGEFTGEGEGKSKKIAKKLAAAAALGELKKLPHIPSVEKSLPR
IKKKNKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVT
VNGQSAEGMGPSKKVAKRNAAEKMLELLGYKVPQPQPPKPALKTEEKTPVKKPGDGRKVT
FFEPGSVDDTSASSKEEEARLPYLSHQQLPAGILPMVPEVAQAVGACQGSQPKDYSRAVP
NPGKATVTAMIANELLYAGTSMTAESILKNKNINHLPHGPLTRPSEQLGYLAAVQGLQVE
YKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNVLKLLSELDLQSNERTG
NGPVPRCGKQELEGELHLKQANSSTLTQTLDGTV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcttcagtaccattgtccggcgagcccaatggctgctgcccccgccccgctc
ccactggggcagcctcagccgggctacagcatccactgtggctcgggcacgttaccctct
gagagtgccagccagccggtcaggagctccgctctacctgctggttcagctactccctac
actaccaccacagtacctaacatggcaaaccctaaagagaagacccccatgtgtttggtg
aatgagttagcccgtttcaacaagatccagcctgagtataagctgctttgtgagcaagga
ccagctcactctaagatattctctgttcgactcacactgggagaccagtactgggaagca
gaggggcccagtatcaagaaagcccaacattctgcagccgcatctgcccttgttgagacg
acgctccctaagcccactatgaggacacctcggaacactaacagaatcccagtagatggg
atgacacacaccatggagttaaacgcgctatgtatgaagctcggtaaaaaaccaatgtat
aaaccaatcgacccatacccggggatgagacccccaaatttccactacaatatccgggct
ccgggaccttaccagcgctctatgcaacagtactattacccgtttccccccgttggacca
atgctgtaccatatggagctttctgttggcggccaacagtttattggaaagggacgcaca
agacagttagccaaacacgatgctgctgccaaggccttgaaagtattacacaaagagcca
atattgcaacaggtttcagtgatgaacggcgagccggaagaagagaatctcaataaatca
gaaattagtcaagtgtttgaaatcgccctcaaacgcaacttaccggtcaactttgaggtt
ttgaaggaagagggacctccccacatgaagagttttgtcgtccgtgtcacggttggggag
ttcaccggggaaggcgagggaaagagtaaaaagattgccaagaagctggcagcagcagcg
gcgctgggagaattaaagaagctgcctcacattcccagtgtggaaaagtcgctgccccgg
atcaaaaagaaaaataaatccatcattaagctgcagaccagcccagaatatggccagggc
atgaatcccatcagccgtctggctcagatccagcaggctaagaaggagaaggagccggag
tacagcatggtgacggagcggggtctgccgcggcgcagagagtttgtcatgcaggttact
gtgaacggccagtcggccgagggaatgggtcccagcaagaaggtggcaaagagaaacgca
gccgagaaaatgctggagctcctgggctataaagtgcctcagcctcagccgcctaaaccg
gcactcaaaaccgaagaaaagactccagtgaaaaagcctggcgatggtcgcaaagtgacc
ttctttgaacccggttctgtagatgatacctcagcgagttctaaggaggaggaggcccgc
ctgccttacctgagccaccagcagctgcctgcaggtatcctgcccatggtcccagaggtg
gcgcaagcagtcggggcctgccaagggtcccagcccaaggactacagccgagccgtcccc
aacccaggcaaggccacagtcaccgccatgattgccaatgagctgctttacgcagggacg
tccatgactgcggagagcatactgaagaataaaaacatcaaccaccttccccacggaccc
ctcacccgaccttctgaacagctaggctatctggcggcagtgcagggcctgcaggtggaa
tataaggatttccccaaaaacaataagaatgagtttgtgtcgctgattaactgctcctcc
cagcctcctctcatcagccacgggatcggaaaagatgtagaatcatgtcatgatatggct
gccctcaatgtattgaagctgctttctgaactggacctgcagtcaaacgaaaggacagga
aatggaccagtgcctcggtgtggcaagcaggagctggagggcgagctgcacctcaaacag
gctaactcaagcacactgacacagaccctggatggaacggtgtag
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