Takifugu flavidus (sansaifugu): 130524781
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Entry
130524781 CDS
T09160
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130524781 (chd5)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130524781 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
PHD-1st_NSD
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
HMG_box
Motif
Other DBs
NCBI-GeneID:
130524781
NCBI-ProteinID:
XP_056887186
LinkDB
All DBs
Position
4:16469322..16516982
Genome browser
AA seq
2004 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDEMPDEDDEGERNSVPLSSLSSFYTEDSLKQQKKKKNKKMKE
GKLSKVMKRKKEGRTLAGVDSDPEETSEVEEEQDFPTIGSESESSTYGLTKKKKKSFKEK
KEKNSRRKRNEEEDEDEDEEEDGTMKEPKSSSQLMQEWGLEDVQYGFTEDDYKTITNYKA
FSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVAAAVAAAVETVTVA
QPTTVSGSQLTSQLGPIKKAKTKEGKGPGVRKRRKSAKEVKKKPKAKKTKSKSGQSGKKK
KASSSEDDFLDESDFDDISIHSASVLSDALRGTTKKKTKSGQKKKKREDGDGYETDHQDY
CEVCQQGGEIILCDTCPRAYHLVCLEPELEKAPEGKWSCPHCEKEGIQWEAKGEEEEEEE
AAGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLK
GKVQKILHWTWREPPLPAELPAGPDGKPNDPMTKPPLKGRPQREFFVKWAGLSYWHCSWV
SELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEDELNSEKRKPIDAQYAMMEERFYRYG
IKPEWMVIHRILNHSFDKDGDVHYLIKWRDMPYDQCTWEMDEFGIPDYERHKASYWDHRE
QILGEDQRPLMVLEGQKLKECHPKKEIPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLE
GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWER
EFEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHILLTSY
ELITIDQAILGSVTWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEEL
FHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDVLGPHMLRRLKVDVFKNMPAKTEL
IVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEA
PMLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYK
YERIDGGITGSLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHN
DIQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSK
QELDDILKFGTEELFKDEMEAARAMGDNKDGEEGNVIHYDDDAISKLLDRSQDATEDTEI
QNMNEYLSSFKVAQYVVKEEEGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARN
LGKGKRIRKQVNYNDATQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRHSRRQL
KNDKDKPLPPLLARVGGSIEVLGFNTRQRKAFLNAIMRWGMPPQDAFNTHWLVRDLRGKS
EREFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV
NGKLSSPDLIPIGLELKKLTESLSSDPNTPVLASPVATQPGTPVPPEKPESLSCTTEDKD
VTEQDCKMLAEQETPWADTASVAEKVSDSEEGKVGSDEKTGDKRGRTELASTQTEPPANP
KDPVLKPSEQPSSRNTLKNLQLETCKETGKSSGKRSNDGPPAKDEDREKKPEDAKNEDIV
EGHLNGERETLEEMDESKKEDKNGFKAKFMFNIADGGFTELHTLWQTEERAALSSGKMND
IWHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFK
LLEQALVIEEQLRRAAYLNMTQEPSHPAMALNTRFTEVECLAESHQHLSKESLSGNKPAN
AVLHKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPSQQ
SFSPGGFGCSQMYSSGFGGGFRGPGGQPMVNYSQMPLGPYVSVSTNGPPPPVSHMDKKSL
DTLRDVMTPDLKAGKPSDVICIED
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtccctgagtaatgaagacgagggacaggacgacatggattttgaagacgag
atgccagatgaggacgatgaaggtgaacgcaacagtgttcccctctcttccctcagcagc
ttctacactgaagactccctcaaacaacaaaagaagaagaagaacaaaaagatgaaagag
ggcaaactgtccaaagttatgaagaggaaaaaggagggacgtaccttggcaggagtcgac
agcgatccggaagagacgtctgaggtagaagaagaacaggattttccaacaataggctcc
gagagtgaaagcagcacatatggcttgaccaagaagaagaagaagagtttcaaggaaaag
aaagagaaaaactccagaaggaagagaaatgaggaggaggacgaggacgaggacgaggag
gaggatgggacaatgaaagagcccaaatcatccagccagctgatgcaagagtggggcctt
gaagacgtccagtatggcttcactgaggacgactataaaaccatcacgaactacaaggct
ttcagccagttcctcaggcctctcatcgccaagaagaaccccaagattccaatgtcaaag
atgatgacagtgttaggggccaagtggcgtgagtttagtgccaacaaccctttcaaaggc
acatctgccactgctgtggcagctgccgtcgctgccgctgtggaaacagttaccgtggca
cagccaactaccgttagtggcagtcagttaacgtctcagctggggccaatcaaaaaagcc
aaaaccaaagagggaaaaggaccaggagtaagaaagaggagaaaaagcgccaaggaggta
aagaagaaacccaaggcaaaaaagacaaaatcaaagtcaggccaaagtgggaagaagaag
aaagcgtcctctagtgaggacgacttcctggacgagtcggactttgatgacatcagtatc
cacagtgcctctgtgctttctgatgccttgcggggtacaaccaagaaaaagaccaaatct
gggcagaaaaaaaagaaaagagaggatggtgatggctatgagactgaccatcaggactac
tgtgaggtttgtcagcagggtggagaaatcatcctatgtgacacttgtccaagagcatat
cacctggtctgtctagaacctgaactggagaaagctcctgagggcaaatggagctgtcca
cactgtgaaaaagagggtatccagtgggaagccaaaggtgaggaggaggaggaagaggag
gcagcaggtgaggaagaggatgaccacatggagttttgcagagtttgtaaagatggtggc
gagttgctgtgctgtgacacctgcccatcttcctaccacattcactgtctcaacccgcct
cttcctgaaatacccaacggggagtggttgtgtccacgatgcatgtgccctcctctcaaa
ggtaaggtccaaaagattctgcactggacgtggagagaacccccattgccggctgaactg
cctgcaggccccgatggaaagcccaacgatccgatgaccaaacctccgctaaagggccga
ccgcagagggagttcttcgtgaaatgggccggtctttcatactggcactgctcgtgggtc
agtgaactacagttggagctgtatcacaccgtcatgtatcggaactaccagcgtaaaaat
gacatggatgaacccccgccgtacgactatggttctggtgaagatgagctcaacagtgag
aagaggaagcccatcgacgcccagtatgccatgatggaggagcgcttctaccgctatggc
attaaaccagagtggatggttattcatcgcatcctcaatcacagttttgacaaggatggt
gatgtgcattacttgatcaaatggagagacatgccctatgaccaatgtacctgggaaatg
gatgagttcggcattccagattatgaaaggcacaaagcttcatactgggaccacagggaa
caaatactcggggaggaccagcggcccctgatggttttggaaggacaaaaactcaaagag
tgccatccaaagaaagagatcccccctgatgctcccatcatagatccaacaattaaattt
gagcaccagccatggtacattaacgccacggggggaactttgcatccataccagctagaa
ggcctgaactggctgaggttctcatgggctcagggcacagacaccatcctggctgatgaa
atgggcctggggaagaccgtacagacaatagtgtttctctattctctttataaagagggt
cactctaaggggcctttcttggtaagtgctcctctgtccactatcatcaactgggagaga
gaatttgagatgtgggcaccagatttctatgtagtaacgtacacaggggataaagacagc
agggcaatcatcagggagaatgaattcacctttgaagacagcgcagtaaaatcaggacgt
aaggtgttccgcatgaagaaagacactccaattaagttccatattctgctgacatcgtat
gaacttatcacaattgaccaagccattctgggctctgtgacatgggcctgcttagtggta
gatgaggcccacagactaaaaaacaaccaatcaaagtttttcagaattctgaatggatat
aagatctactacaagctgctgctcactggaacgcctcttcagaacaacctggaagagctc
ttccacctgcttaactttctcacgccagagcgcttcaacaacctggaaggtttcctggaa
gagtttgccgatatctctaaagaggaccagatcaagaagctccatgacgttctgggtcct
cacatgttgagaaggttgaaagttgatgtgttcaagaacatgcctgcaaagacagaactg
attgtcagagtggaactcagcccaatgcagaagaaatattacaaatttattttgacgcga
aactttgaggctctaaactccaaaggaggggggaaccaagtttccctgctcaatatcatg
atggacctgaagaagtgctgcaaccatccctacctgttccctgtggctgctgtggaagct
cccatgttacccaacggctcatatgatgggaatttactggtgaagtcatcgggaaaactg
acgttgcttcagaaaatgttgaagaaactcaaggatgaaggacacagagttctcattttc
tctcagatgacaaagatgctggatttacttgaggactttttggaatttgagggttataaa
tatgaacgcattgatggtgggattacaggaagcctcaggcaggaggccattgaccgcttc
aatgcaccaggcgctcagcagttctgcttccttctttcaacgcgggccggaggtcttggt
atcaaccttgcgagtgccgacactgttatcatttatgactccgactggaaccctcacaac
gacatacaagcttttagcagagctcatcgtattggccagaataagaaggtgatgatctat
agatttgtgacacggggctccgtggaggagcggatcacccaggtggctaaaagaaagatg
atgctgacccacctggtggtccgacctggactcggctccaagaccggctccatgtccaaa
caagagctggatgacattctgaagtttggcactgaggaacttttcaaggatgaaatggaa
gcggcacgagccatgggtgacaacaaagatggcgaggagggcaacgtgatccactatgat
gacgatgccatctccaaactacttgaccgcagccaggacgccactgaagacacagagatt
cagaacatgaatgagtacctgagttccttcaaggtggctcagtatgtggtgaaagaggag
gagggggaggaggaggtggagcgggagatcatcaaacaggaagagaacgttgatcctgac
tactgggaaaaactcctgcgccaccactatgagcagcagcaggaggatttggcccgaaat
ctcggcaaggggaagcgcatccgaaaacaggtcaactacaacgacgcgacccaggaggac
caagaatggcaggatgatctttcagataatcagtcagagtactcagtgggatccgaggat
gaagatgaagactttgaggaaagacctgaaggtggacgcagacattctcgtcgtcagctg
aagaacgacaaggacaaacccctgccacccttgctggcacgcgttgggggcagtattgag
gttttagggttcaatactcgccagaggaaagccttcctcaatgccatcatgcgctggggc
atgcctccacaggatgccttcaacactcattggctggtgagagacctgagggggaagagt
gagcgcgagtttagggcctacgtatctctgttcatgagacacctgtgtgagccgggggca
gatggagcagagacctttgctgatggcgtcccacgcgaggggctgtctcgccagcacgtt
ctcacccgtatcggagtgatgtcgctcgtccggaaaaaggtgcaggaatttgagcacgtc
aatggcaagttaagctctccagatctgattcccattggtctggagctgaagaagctgaca
gagagtttgtcctctgaccccaacacaccggtgctggcaagccccgtcgctactcagccc
ggcactcccgtccccccagagaagcccgagtctctgtcctgtaccactgaggacaaagac
gtaactgagcaagactgcaagatgctcgcagagcaggaaaccccgtgggcggacacagcc
tccgtagccgagaaggtatctgacagtgaagagggcaaggttggctcagacgagaaaaca
ggagataagaggggcagaacggagttggcctccacccagacagagccacctgccaaccca
aaagatccagttttgaagccatcagaacagccatctagccgcaacacactgaaaaatttg
caattggagacctgcaaagaaacagggaaatcttcaggaaagcgtagcaacgacggccct
ccagcaaaggatgaagaccgggagaagaagccagaggatgcaaagaatgaggacatcgtg
gagggtcacctgaatggggagagagagaccttggaagagatggatgagagcaaaaaggag
gataagaatggattcaaagcaaagttcatgttcaatattgcagatgggggctttacagag
cttcacactctttggcaaacagaggagcgagcggcactgtcctctgggaagatgaatgac
atatggcatcgtcgccatgactactggctgttggctggtatcgtaacacatggctacgcc
cgctggcaggacatccagaatgacccacgctatgctattctcaatgagccctttaagact
gaaatgcacaagggcaactacctagagatgaagaacaaattcttagctcgccgctttaag
ttgttggagcaggcactagtgatagaggagcagttgaggcgggcggcttacttgaatatg
acccaggagcccagtcacccggccatggcgctgaacactcgcttcacagaggtggaatgt
ctggcagagtctcaccagcacctctccaaagagtctctctccgggaacaagcccgccaat
gctgtgctgcacaaagtgctgaaccagctggaggaacttctgagtgacatgaaagcagac
gtaacgcggcttcccaacatgctttccaggattccacccgtttctgctcgcctgcagatg
tcggagcggagcatattgagccgtctcaccagccgagggagcgagcctccgtcgcagcag
tcatttagtcccgggggatttggctgttctcagatgtacagcagtggctttggtggaggc
ttcagaggccctggtgggcagccaatggtgaactacagccaaatgcctcttggcccttat
gtcagtgtgtccactaatggccctccaccacccgtaagccacatggataagaagtccctc
gataccttacgagatgtgatgacgcctgacctcaaggctggcaagccgagcgatgtgatt
tgcattgaggactag
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integrated database retrieval system
