Takifugu flavidus (sansaifugu): 130525003
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Entry
130525003 CDS
T09160
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130525003 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfs04147
]
130525003 (irf6)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
130525003 (irf6)
Exosome [BR:
tfs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130525003 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
130525003
NCBI-ProteinID:
XP_056887624
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All DBs
Position
4:complement(10423596..10427781)
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AA seq
493 aa
AA seq
DB search
MSVTPRRVRLKPWLVAQVDSGRYPGLVWIDREAMRFRIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGMDEPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDVCEIPQPS
SNQGSSDAGSWTPHDDDGGEEDIPDTPESLPPYPSNGTSPSPLILWSPTGSESSMQPSSC
PPSNEGWPKEESVKIWPKEEPVDVEMHPTLMADMPPANLPDHPMQPPPLPDTLFATPETW
ISSLPMTDLEVQFLYRGKEMCPTVTVSNPQGCRLFYGDLGPMVNQEELFGPVSLEQLRFP
TAEHITNDKQRVFTSRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNQAAPNLI
ERQKKVKLFCLESFLSGVIAHQRGQTPTLPAFDISLCFGEEWPDGRPRERKLIMVQVIPV
VARMITEMFSGDNTRSFDSGSVRLQISVPDIKDNIVSHLKHLYCLLQTHQGQEGWALPPG
AGLNIDQALQAQH
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcaccccgcgacgcgtccggctgaagccctggctcgtggctcaggtggacagc
ggccgataccccgggctggtgtggatcgaccgcgaggccatgcgcttcaggatcccatgg
aaacacgccacgagacatacgccgcagcacgaggacgaggacaccatatttaaggcctgg
gctgtggagactgggaagttccaagaaggaatggacgaacctgatcctgcaaagtggaaa
gctcagcttcgatgtgccctcaacaaaagccgagaatttaacctggtctacgacggcacc
aaagaggtcccgatgaatcctctgaaaatatacgacgtctgcgaaatcccgcagccgtcc
agcaaccaggggtcttcagacgcgggttcttggacaccccatgatgacgatggtggtgag
gaagacattccagatacaccagagtctcttcctccttacccatccaatggcaccagcccc
tctcctctcatcctgtggtctcctacgggctcagagtcctccatgcagccctccagctgt
ccaccttcaaacgagggctggcccaaagaggaatctgttaaaatctggcccaaagaggag
cctgtggatgtggagatgcaccccacccttatggctgacatgccccctgcaaatctgcct
gatcacccgatgcagccccctcctctgcctgacactctgtttgccactccagaaacatgg
atcagctccctcccaatgacagatctggaggtgcagttcctgtaccgggggaaggagatg
tgtcccacagtcaccgtcagtaacccgcagggctgcaggctgttctacggagacctgggc
cccatggtcaaccaggaggagctgttcgggccggtcagcctggagcagctgcgctttcca
actgcagaacacatcaccaacgacaagcagagggttttcaccagccgcctgctggacgtg
atggacagaggtttgatcctggaggtcagtggccacgacatctatgcagtgcgcctctgc
cagtgtaaggtgtactggtctggcccctgcgctccaaaccaggcggcccccaatcttatc
gagcgccagaagaaggtcaagctgttttgcctggagtctttcctcagcggggtgatagcc
caccagcgtggccagactccaaccctccctgcgttcgatattagcctttgcttcggggag
gagtggcctgacgggaggcccagggagaggaaactcatcatggtccaggtgattccagtg
gtggcccgtatgataactgagatgttttccggagacaacacgcgatccttcgacagcggc
agtgttcgactgcagatttcagttccagatataaaagacaacatagtttcccacctaaag
catctgtactgcctgctgcagacccaccagggccaggagggctgggcattgccccctggt
gcgggcttgaatattgaccaggccttgcaggcccaacactga
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integrated database retrieval system
