Takifugu flavidus (sansaifugu): 130525224
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Entry
130525224 CDS
T09160
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03022
Basal transcription factors
tfs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130525224 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
130525224 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130525224 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130525224 (gtf2h2)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130525224 (gtf2h2)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130525224 (gtf2h2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Zn_ribbon_GTF2H2
VWA
Motif
Other DBs
NCBI-GeneID:
130525224
NCBI-ProteinID:
XP_056887715
LinkDB
All DBs
Position
5:complement(17826446..17830779)
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKKRRLIESHGQVRLGMMRH
LFVVIDCSRSMEDQDLKPNRLTSTLKLLEAFVDEYFDQNPISQMGLITTKNKRAEKLTDL
SGNPKKHCAALKKAVDTVCVGEPSLYNCLSLAVQTLRHMPGHTSRELLIILSSLTTCDPA
NIYELIETLKTLKVRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHTVASLTDQDAKPSFSMAHLDSSSGPDLSLGGYFCPQCHAKYTE
LPVECKVCGLTLVLAPHLARSFHHLFPLQVFTESPADDLQTERSCQACHGELKDKSVFSC
PSCLSVFCVDCHLFIHDSLHCCPCCIHRRSCP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagaaagagccaagcgctgggaaggaggctatgagaggacatgggag
gtgttgaaggaggacgagtctggctccctcaaggccacagtagaggagatcctgttccag
tccaagaaaagaagactgatagagagccatggacaagtgaggctgggcatgatgcgtcat
ctctttgtggtgattgactgttcaaggagcatggaggaccaggatctgaaacccaaccgt
ctcacctccactttgaagctgctggaggcgtttgttgatgagtatttcgaccagaacccc
atcagccagatggggctcatcaccaccaagaacaaacgcgctgagaagttgaccgacttg
tcaggaaacccaaagaagcattgtgctgccctgaagaaagcagtggacacggtgtgtgtc
ggagagccgtccctgtacaactgcctcagcctggccgtgcagacgctcaggcacatgcct
ggacacacgagccgggagctcctgataatcctcagcagcctcacgacatgtgacccagcc
aacatctacgagctgatcgagaccctgaagactttgaaggtcagggtgtcagtcatcggc
ctgtcagcagaggtgcgggtgtgtaccgtgctaaccagggagacgggcggctcctaccac
gtcatcctggacgagagtcacttcaaggagctgctgatgctgcatgtgaagcctccacca
gccagctcctcctctgagtgctctttgattcgaatggggtttcctcagcacaccgttgcc
tctctcacagaccaggacgccaagccctccttcagcatggctcacctggacagcagcagc
ggtccagacctgtctctggggggatacttttgtccacagtgtcatgccaagtacacggag
cttcctgtggagtgtaaagtgtgtggcttgacactggtgttggccccccatctcgccagg
tccttccaccaccttttccccctacaagtctttacagagagtcctgcagatgatctccaa
acagagaggtcctgccaagcttgtcatggggagctcaaagacaaaagtgtgttcagctgt
ccatcgtgtctcagtgtgttctgtgtcgactgccacctcttcatccacgactcgctccac
tgctgcccctgctgtatccaccgtcggagttgcccctga
DBGET
integrated database retrieval system
