Takifugu flavidus (sansaifugu): 130525421
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Entry
130525421 CDS
T09160
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130525421 (zfr)
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130525421 (zfr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
130525421
NCBI-ProteinID:
XP_056888180
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All DBs
Position
5:9921615..9932745
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AA seq
1069 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSHQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAAATAAAYGGYQPAHATTDYGYPQRQPE
VAPPPPPVTSQNYQDSYSYVRSTASAVGYDSKQYYQQPTATAAVAAAQPQPSVADSYYQS
APKPAYSQGVTSYTQTQQTRQVTVIKPAAPSPASSTFSIYPVTSTVQPVAAAASVVPTYS
QSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAVAAVAASAAWTGNTFTKK
APFQNKTLRPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSSSSS
GSSGGVLARNAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSM
VAQTSSSSTTSTSKAATATLSSASSSLCSASTSSTTSSSGPPYLKPVNIVSSAVGGLKNP
LTSNPSAVNNASVGKKVGAPKINFVGGNKLQTTVKMDDTRTEVKMDSSKASTPLSGLQDS
KGDLSDPLTCSALAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHL
KGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRR
YEEDMYWRRVEEEQHHWDDRRRLPDGGYPQGPPGLLGVRPGMPGLQPQGPVPPRRPDSSD
DRYVMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIISDQDKPNEEEAEDPPKDRLLK
GVMRVGVLAKGLLLRGDKNVNLVLLCAEKPTKDLLSRIVEHLPKQLTIVTPEKYEVKGSD
QEAAIILNSCTEPKMQVTITLTSPVIREETGRDGDVTSGMVKDPADVLDRQKCLDALAAL
RHAKWFQARANGLQACVIIIRILRDLCQRVPTWSPFPGWAMELLVEKAISSASAPLSPGD
ALRRVFECISSGILLPGGPGLLDPCEKKPVDTLASMGGQQREDITSSAQFALRLLAFRQI
HKVLGMDPLPQMNPRFNVRNSRKRRRDNSDGNDSFEGEGKKDKKDYDSF
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgtccagtggtttccttcacctacgtgcccagccggctaggtgaagat
gccaaaatggctaccggcaattattttggatttacacacggcgctgccgcccagtacagt
catcagccagctgccggggtggcctacacgcatccaaccacagtggccagttacaccgta
caccaggcaccagtggcagcacacactgtggcagcagcctatgcgcccactgctgccact
gttgccgtagcgaggcctgcacccgttgccgtggcagcagccgctactgctgcagcttat
ggggggtaccagccagctcacgccactacagattatggttatccgcagcgacaacctgag
gttgccccgccaccaccgcctgtcacctcccagaactaccaggattcgtactcctacgtt
cgctccacagcttcagctgtaggatacgacagtaagcagtactaccagcagcccacagct
acagctgctgtggctgctgcccagccccaacccagtgtggccgattcctactaccagtca
gctcctaaaccagcatacagccagggggtgacgtcctacacgcagacacagcagactcgt
caggtgaccgtgattaagccggccgctcccagtccagcttcgtcgactttctccatctac
ccagtgacgtccacagtccagcctgtggcagctgctgcatctgtggtccccacttattcc
caaagtcccacttacagcacaaatgctgtcacctattctggaacatcttattcaggctat
gaagcagcagtttactcggctgcctccagctactatcaacagcagcagcagcagcagaaa
caggctgtggcagcggttgcagcatctgcagcctggacaggaaacactttcaccaagaaa
gccccctttcagaacaaaacgcttcgccctaagcagcctcccaaaccccctcagatccat
tactgtgatgtctgcaagatcagctgtgctggcccacagacttacaaagagcatctagaa
ggccagaagcacaagaagaaggaggcggcactgaaggtttcccagagcagcagcagcagc
gggagcagcggaggagttctggctcgcaacgctcagaatcagcttcgctgtgagctgtgc
gacgtttcctgcaccggtgccgatgcttatgctgcccacatccggggagcaaaacaccaa
aaggttgtgaaactccatactaaactgggaaagcccatcccctccactgagcccagcatg
gtggcccagacctcatcctcgagcacgacttccaccagcaaggctgccacagcaaccctg
agcagcgccagcagctccttgtgctcagcctccacctcatccacaaccagcagctccggc
cccccctacctcaaacctgtcaacattgtcagcagtgctgtgggaggactcaagaacccc
ttaaccagtaacccctctgccgtcaacaatgcttctgttgggaagaaagtcggcgccccc
aagattaactttgtcggtgggaataaactccagaccacagtgaagatggatgacaccaga
actgaggtcaaaatggattcttctaaagcttctacgcctctgtcgggtcttcaggactcc
aaaggtgacttgtcggaccctctgacctgctcggctctggcagcgctgcagagcgacgtc
cagcctgtcggacacgactatgttgaggaggtccggaatgatgaaggaaaggtcattcgt
ttccactgcaagttgtgcgagtgtagtttcaatgacccaaacgcaaaagagatgcacctg
aaaggtcggcgacaccgcctgcagtacaagaaaaaggtgaatccagatctgcaggtggag
gtgaagccaagcatccgagccaggaagattcaggaagaaaagatgaggaaacagatgcag
aaggaagaatactggaggaggagggaggaggaggagcggtggagaatggagatgaggcgt
tatgaagaggacatgtactggaggcgagttgaagaagagcagcaccactgggatgatcgc
cggcgtttaccagatggggggtatccacaggggcctccgggtctcctcggagtgcggccc
gggatgccaggcctccagccacagggccccgtgcccccacgccggcccgattcttcagac
gatcgttacgtcatgaccaaacacgccgccatctatccgtctgaagacgagctccagtcc
atccagaagatcgtgtccatcacagaacgggccctcaaactggtctctgacatcatttca
gaccaggacaagcccaacgaagaggaggccgaagatcctcctaaagacagactcctgaag
ggagtgatgagggtcggagtcctcgccaaggggttgctgcttcgcggggacaagaatgtc
aacctggtcctgctttgcgctgagaagcccaccaaggacctcctgtcccgcatcgtggag
cacctccccaaacaattaacaattgtaacaccagaaaagtacgaggtgaagggatctgat
caggaagcggccatcattctgaattcctgcaccgagccaaagatgcaagtgaccatcacg
ctgacgtcacccgtcatcagggaggaaacgggtcgggatggagatgtaacttcgggtatg
gtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctggctgctctg
cgccacgctaagtggttccaggctagagccaacgggctgcaggcgtgtgtgatcatcatc
cggatcctgagagacctctgccagcgcgtccccacgtggtcgcccttcccgggatgggcg
atggagctgctggttgagaaggccatcagcagcgcgtccgcccccctcagcccaggagac
gctctcagacgggtctttgaatgtatttcctctgggattctacttcctggtggtccggga
ctgcttgacccctgtgagaagaagccagtggacactctggcatcgatgggaggacaacag
agagaggacataacctcgagtgcccagtttgccctgaggctgctggccttccgacagatc
cacaaggttttgggcatggaccctctgccgcagatgaacccccgctttaatgtccgcaac
agccgcaagcgtcgccgcgacaacagcgacggcaacgacagctttgagggggagggcaag
aaggacaagaaggactacgacagtttctaa
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integrated database retrieval system