Takifugu flavidus (sansaifugu): 130525444
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Entry
130525444 CDS
T09160
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130525444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130525444
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
130525444
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
DUF7783
RNA_pol_3_Rpc31
CHASE3
DUF3138
Motif
Other DBs
NCBI-GeneID:
130525444
NCBI-ProteinID:
XP_056888214
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Position
5:complement(2259798..2273116)
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AA seq
290 aa
AA seq
DB search
MSGRVQQIRVSAYPDTPYFLRLDWAVDLAGGFTLALTDGSSAWIGEVSEEELTRDADDMG
VTTEEYVEDVLRALAGDGAQGHRRDDGEEAAYSLQLTPDHCRLSYQKISNNVLVNLGSVE
LQPALDPVELNRDMIGQSLKRSTDLESENCRLLEENDRLKQEHRRILHELEQQVVDKEAM
ERELYSRFVVVLNEKKAKIRSLQDTLHQLQQAEEEREHAAGHKTASDGDRAAATVESVHP
SQEPTLLITGRNLVCYGISLDKTSSDDEDQRPPGKRRSLPSHSPESYHQE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcgagtccaacagatcagggtgagtgcttatccggacaccccctacttcttg
cggctcgactgggccgtcgacctggctggcggattcacgttagctctcaccgatggcagc
tcagcgtggattggagaagtgtcggaagaggagctgacgagggacgctgatgacatgggc
gtcacaacggaggagtatgttgaagatgtccttcgtgcactagcaggagatggagcacaa
ggacacagacgggatgatggcgaggaggcggcgtattcgcttcagcttactccagatcac
tgtcgtctttcctatcagaagatctcgaataatgtcttggtgaacttgggttccgtggag
ctacagccggctctggatcccgtggagctgaaccgagatatgatcggtcagtctttaaag
cgcagcaccgatctggagtcagaaaactgccggctgttggaggagaacgacaggctgaag
caggagcacaggaggatacttcatgagctggagcagcaggttgtggataaggaggcgatg
gagcgggagctctactcacgtttcgtggtggtgctgaatgaaaagaaagcaaagatcaga
agcctgcaggacactctccatcagctccaacaggccgaggaggaaagagaacatgcagca
ggtcacaaaacagcgagcgatggagacagagcagcagccaccgtcgagtccgtccatccc
tctcaggaaccgaccctcctcatcacagggcgtaacttggtgtgctacggcatctctttg
gataagacttcatctgatgatgaagaccaacgaccgcctgggaagcggaggtcgcttcct
tcacactctccagagtcttaccaccaggaataa
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