Takifugu flavidus (sansaifugu): 130525447
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Entry
130525447 CDS
T09160
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130525447 (vps13a)
Membrane trafficking [BR:
tfs04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130525447 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
UDG-inhib_P56
Motif
Other DBs
NCBI-GeneID:
130525447
NCBI-ProteinID:
XP_056888218
LinkDB
All DBs
Position
5:7166601..7192465
Genome browser
AA seq
3265 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGDAVLTNLEINENALSQLDIPFKVKAG
HIGRLELKIPWKNLYTQSVEATLDGVYLLIVPLASIKYDAEKEEKQLQEARQRKLQQIET
KLTADDQENSTLEKQDTFVEKLVTQIIKNLQVQISNIHVRYEDNVTNPNSPLSIGVSLKN
LSLQTADENWTPSLLDENSRLFFKLVRLDNLFSYLNVNSVLFSDYSTEEALQCLQRSMEV
YDSDSSNHDFIFRPISVDAKLQMNPRSDVDFSSPKTDLTVNLSEVAIELNRSQYVSVLEL
LGSVYMMSRNLPYRKYRPVVQVHRNASIWWNYAITSVLEVDVKPRLHMWSWWHIRCHRQM
VKSYKELFKTKITSKKPTEELLKALEEPEKTLDIFNITLARQQAEVEASKAGLCIYRPGM
KMEEEQSQGWLSWMWNWGGEAEKPKDVKSGGFDELLTPAEKDKLYTAIGYSETDVNHNLP
KNFEDTKINFHMERLSLSLKDKDKDKNEIMKVTVGELKSTLTQRSGAEAIKVTAELSLFE
VTGLASQRSAPTLLSSRKAATAGTPLLSFLFETNPIDETSNQKLHVQSQPLEIIYDAITV
NTMSEFFKAPGDVQLDELTNATLMKLEQFRDRTATGLLYVIETQKVLDLKVDLMASYVIV
PETGFYSGTQNILLLDLGHFKITSLSKKDLPQLTVNTSNLEEIMSRAYDSFDVQLSNLQL
LYSKPESDWKVARKQRESPLHILEPVDLTVTFSRAMVVKDSRMAKYKMSGTLPLLSLRIS
DDKLRSILGLIYSIPLPKSTGPSPGSLQAPVLKLKSTPQLTPRKFLNLPDQRSSLMFESC
DAISITSLGSEEDLFYDAPSSPIGDRAFFSDNPLPLRYADLHKRSLVKEDIPKNMTDFIM
TFVINTFSVELCRLSEDQEITVLHLDIETLGTELKINTFDMTSNTYLREICLKCPEYMDS
ENKPVQLLTTLDNSEVDLLILEYIKADKTGPEFKTQHKNTEQLIKVTFSSLDVHLHTEAL
LNAMNFLNNLLPPPAKKEEEGEGGQEELPTILEEDETEKEEEKTMETVVTKKKTSKITKF
ADVVNLHIRADLRCLKVFIRGQKARISEIIIEGLVSQVLMKKKEMEVQANLKSIVILDCA
QDAMYKKAVSIADKEVFAFQMVNYTDATEGDAYLDMSQVDTAVTLNVGCIQVIFLNKFVS
TILAFINNFQEAKEALVVVTAQAAEKAATGVKELAERSSRIRLNVHFNAPVIFLPQSSSS
SNVIVADLGLLSVKNRFAKQPFKSIVKIPPVVDIMTVRLTNLKMYRTTYINGGFQGEIQL
LEPVNLDLEIQRNLSSNWYHSIPDIGITAHLKPISLILSQSDMTVILRTLSENLSENSDV
PPPALPSTGAASSDAASNKESQGSTGPASSNTVVTAAVVETQQNIKMKTTLKLDFKFDSM
TLSLYSPDENVVHLVDSRDEQLKLAEFTLGTISTSVNRFSDSSMKASVQLATCLLDDKRP
KIKTVTPRMMGLRPGGEQNKMVEVHYRQGREGISVETVVQDVYLCASMEFLLTVADVFLK
ATQHGFAQVPQPKTSAGAGEKKQVNSTVTSKEPNVMSKTEISLLLRNPDIVFVADLTRAD
APALVLSTQCELLMKSCAEGSQITAVINDLKVMACPFLSEKRKNNMTTVLQPCQVFFQST
QTPTSPQAMEVSMNALTLKVSPLIINTVITILSVLSPAAETPEELDSPVPVDLWEKRSWK
DLKFWFLEEGGDEDTKSLTPLVPQGESLQMNIKSICLTLEAGVGHRTIPMLLAKSSFNGD
VKNWSTLINLHSKLDLEVHYYNEIMGVWEPLLEPLEDETGEGFRPWRLVLKMKKKPVSFP
GLSDEVDYQIPDYKTVIVISSKDQLNITLSKCGLTMLSHLGQAFAEAAKQTSDSFQKEEA
PFVVKNRLGLPVSVRYSEMFSPIGQQSTTFTVKLQDGETLGMDYSTKTESDQFSAMISLS
GKEYYIQPTPMGHTSASVIPLIKVGKGMYSVVHTESGVTCFLVCQISSVEGSKYIKIRSP
FQIINHFQIPFKVFEGSTCLGKALPNEEFCVPLDSYRSELSLQPVLVDDDQGEQFECSEG
FSYEDVSIEPPTKRLEQTCRRRSGEGGVLMVNMVPVKDAVTFKHTGDVGENFDVPFVVHL
WPSILLRNLLPYPISYKLKDSGVSAPEATLNPGHSAQLYTAVINQSSVDLCLLNYLSQDW
SSVYSFLSDQEEITFIVFQSVRDPNEDDEGPEMKRAELDIAVHVKYDLGQMVVAIHSPYW
MVNKTNRLLQYKADDIHRKHPLDYDMPLLFSFKPRYFLKNNKVRLMISDSELSDEFSLDT
VGSHGDVKCKGRYKDYLVGVKIEASSFTLTRIVTFVPFYTLVNKTKESVFICEDGLDNWT
EAQPEESGIPFWPENDTKRLKIKVEGCTLPPCSIDFTRQENCLLLHMDNSLGGIIVDVNL
SEHSATIRFSEYHDGAAPFLLINHTKGQTLQFYQSARTDSAWVANDLLDLSFSMEEDSSQ
KEEEKDELEPGKAVYYTWAESTGSRELCWKCGTYSGKLKSEEDVCLDINSEKKLFVLSFY
EGLQRVVLFTEDQHTYKLLCESEKVQLAEQEILLSLQNMGVSLVNNNSSQEVSFIGITSS
DVVWELKPKKKNRWKTLSTKETEMLENSYKHYVDTEPLDNGIVDLENGYQVSFTPNGVDM
RMLQPCSAPLRRHFLPAVKVEYSVSPRQSAYRVQIHRIQIQNQLPGAIFPYVFYPVKLPK
SITMDSEPKPLTDISIVTRTAGHSNISRIKYFKVLIQEMDLKLDLGFLYAILDLFSPENA
SVMSPEQEAELFETDLENIKMVLNSVSAADTSPISLYEYFHISPIKLHLSLSLSTGGEDG
MKQERDTELIPVQSLNLLLKSIGATLTDVQDVVFKLAFFELNFQFYTTQQLQWEVIRHYS
KQAIKQMYVLVLGLDVLGNPFGLIRGLSEGFEAFFYEPYQGAIQGPEEFVEGMALGVKAL
VGGAVGGIAGAASRITGAMAKGVAAITMDEEYQQKRREAMNRQPSGLREGLARGGKGLVS
GFVSGITGIVTKPIKGAQREGAAGFFKGFGKGLVGAVARPTGGIIDMASSTFQGIKRAAE
TSQDVESLRPPRFIHEDGVIRPYKEREGLGSQMLQKIENGRYAKYKYFAHAKVNESDILM
ITKRGIFFVTKGTFGQLTCEWQYLFEEFTKDPMIVEHRRLRIEAKERVKSVFHAKEFGKI
INFRTPEIAKWVLAKLDDARENLPK
NT seq
9798 nt
NT seq
+upstream
nt +downstream
nt
atggttttcgaaagcttggtggtcgatgtcctcaaccggtttttaggagactatgttgtc
aaccttgacagctctcagttaaagctcggcatctggggaggtgatgcagttctcactaat
cttgagataaatgaaaatgctttgagtcagcttgacattccttttaaagtgaaagctggt
catataggacggttggagctgaagatcccatggaagaacctctacacacagtcagtagag
gcgacattggatggtgtctatctcctcatagtccccttagcaagcataaagtacgatgca
gaaaaagaggaaaaacaacttcaagaggctcgtcagagaaaactacagcagatagagaca
aagttgactgctgatgaccaagaaaattctacattggaaaagcaggacacctttgtggaa
aagcttgtcactcagatcatcaaaaacctgcaggtgcagatctccaacatccacgtgcgc
tatgaagacaacgtcacgaatccaaactcgcctttgtctatcggagtgtcactgaaaaac
ctcagtcttcagacggctgatgagaactggacccccagccttttggatgagaattccagg
ctgtttttcaagcttgttcgtcttgacaacttattttcgtatttgaacgtcaactccgta
ctcttctccgattatagcacagaggaggctttgcaatgcctccagaggagtatggaagtt
tacgattcggattctagcaatcacgacttcatttttcgtccaatatcagtggatgctaaa
ctgcagatgaatccgaggtcagatgtggacttctcctctcccaaaacagacctcacggtc
aatctgagtgaggtggccattgagctcaacagatcacaatatgttagtgtcctggagctg
ctgggatccgtgtacatgatgtcacgcaacctgccgtacaggaagtacagacccgtagtc
caggttcacaggaatgcctccatatggtggaattatgcgatcacaagcgttcttgaggtc
gatgtgaagcctcggctacacatgtggtcatggtggcacatccgctgccatcggcagatg
gtgaagtcttacaaagagttgttcaagaccaaaatcaccagcaagaaaccaactgaggag
ttactgaaggccctcgaagaaccggaaaagacattggatatttttaacatcactctggct
cgacagcaggctgaggtggaggccagcaaggcagggttgtgcatttaccgtccgggcatg
aagatggaggaagagcagtctcagggatggcttagctggatgtggaactggggaggagag
gctgaaaaaccaaaagatgtcaaaagtggaggctttgatgagctgttgacgcctgctgag
aaggataagctgtacactgccattggatacagtgagacagatgtcaatcacaacctgcca
aagaattttgaggacacaaagatcaattttcacatggaaaggctgtcgctgtccctcaaa
gacaaggacaaggacaaaaacgagatcatgaaggttactgtaggcgagctcaagtccaca
ctcacacagcggtctggggcagaagccatcaaagtcacagcagagctcagtttgtttgag
gtgacaggcctggccagccaaagatctgcccctaccctcctgtcatcgaggaaggcggct
acagctgggaccccgctcttgtccttcttatttgagaccaacccaatagacgaaacctcc
aaccagaagttacatgtgcagtcgcagcccttagaaatcatctacgatgctattacagtg
aacaccatgtcggagttcttcaaggctccaggagacgtgcagctggatgagctcaccaac
gcaacactaatgaaactggagcagtttcgagatcgtacagccactggtctactgtatgtg
attgaaacacagaaagttcttgacctgaaagtggacctaatggcctcctatgtcattgtt
cctgagactggtttctacagtggtactcagaacatcctgctgttggatcttggtcatttc
aagataacaagtctaagcaagaaagatcttcctcaactgaccgtgaacacgagcaacctt
gaagaaatcatgtccagagcctacgacagctttgacgtgcagctcagcaacctgcagctc
ctgtacagcaaaccagaaagcgattggaaagtggcacgtaaacagagagagtcaccccta
cacatcttagagccggtcgatttgacagtcactttcagcagagcgatggttgtaaaagac
tcccgcatggcaaagtacaaaatgtctggaacgctgcctctgttgtcacttcgcatttct
gatgataaactacgaagtattttggggttgatatacagcatacctctgccaaagagcact
ggcccttcccctggcagtcttcaagcccctgtgttaaagctaaaatccactcctcagctc
actcccagaaaattcctgaacctaccggaccagcgctcatcgctcatgtttgagtcctgt
gatgccatcagcatcacctcattgggatcagaggaggatttgttctatgatgctcccagc
tctcccatcggtgatcgagccttcttttctgataatccgctgccgctacgctacgcagac
ctacacaaaagaagtcttgtcaaagaagacattccaaagaacatgactgactttatcatg
acgtttgtcatcaacacgttttctgtcgagttgtgccgcctgtcagaagatcaggagatc
accgtactgcacttagacatagaaactctgggcactgagttgaaaattaacacttttgac
atgacatcaaacacttatctgcgagagatctgcctgaagtgccccgagtacatggattct
gaaaacaagccggttcagttactcactaccttagacaactcagaggttgacttgctcatc
ctggagtatattaaagctgataaaactggcccagagttcaagactcagcacaaaaataca
gagcagctcattaaggtgaccttttcatccctggatgtccatctacatactgaggcccta
ctcaatgccatgaacttcctaaacaacctccttcctcctcctgctaagaaggaggaggaa
ggagaaggagggcaggaggagctccccaccatcctagaggaggatgagacagaaaaggag
gaagagaagacaatggaaactgttgtcaccaagaaaaaaacatcaaagattacaaagttt
gcagatgtggtaaatctgcatatcagagcagatctccgatgtctgaaggttttcattcga
gggcagaaagctaggatctctgaaatcattattgaaggtctagtttcccaagtactgatg
aagaagaaggagatggaggtacaggcaaacctgaagagcattgtcatcttagactgtgcc
caagatgcaatgtacaagaaggctgtgtcgatagcagataaagaggtgtttgcctttcaa
atggtaaattatacagatgcaacagaaggagacgcctatttggacatgtctcaagttgat
actgccgtcaccctgaatgtgggatgcattcaggtcatcttcctcaacaaatttgtttcc
accattttggcctttattaacaacttccaggaggctaaagaagctttggttgtggtgaca
gcccaagctgctgaaaaggcagccactggtgtaaaagagctggcagagaggagcagtcgg
attcgtttaaatgtccactttaatgctcctgtcatcttcctgccgcagtcctcttcttcc
tccaatgtcatcgtagctgatctcggtcttctgtctgtcaagaaccgttttgccaagcag
ccctttaaaagtattgttaagattccgcctgttgtggacataatgactgtaagactgaca
aacctcaaaatgtacaggaccacatatataaatgggggctttcagggagagatacagttg
ctggagcccgtcaacctggacttggaaatccagagaaatctttcctccaactggtaccac
agcatccctgacattgggatcactgctcatcttaaaccaattagtctgatcctgagtcag
tctgacatgacagtgatcctgcgaactctgagtgagaatctgtcagagaactccgatgtc
ccccctccagctcttccatccactggtgcagcttcctctgatgctgcatcaaacaaagag
tcacagggctccactggaccagccagtagtaacacagtggtgacagctgctgtggtggag
acccagcaaaacatcaagatgaagaccacgcttaaattagacttcaagtttgactcaatg
acgctgagcttgtacagccctgatgagaatgtggtgcacctggtggattcacgtgacgag
caactgaagttggcagagtttactctggggacaatctctacctccgttaacaggttctca
gatagctccatgaaggcctctgtccagctcgctacctgccttctggatgacaagagaccc
aagatcaagacagtcaccccaaggatgatgggcctgaggcctggaggagaacagaacaag
atggttgaggtgcactaccgccagggccgtgaaggcatcagtgtggaaacagtggtacaa
gatgtctatctgtgtgccagcatggagttcctgctcacggtcgcagatgtttttcttaaa
gctacccaacacggttttgcccaagtgccacaaccaaagacctctgctggagcaggggag
aaaaagcaggtcaactccactgtcacatctaaggagcccaacgtaatgtcaaagacagag
atcagtcttttgctccgtaacccggatatcgtgtttgtggctgacttgacacgtgctgat
gccccagccctggtcctgtctacgcagtgtgagttgttaatgaagagttgtgcagagggg
tcacagatcaccgccgttatcaacgatctaaaggttatggcatgcccctttttatcagag
aagaggaaaaataatatgaccactgtgctgcagccatgtcaggtgttcttccaaagtact
cagaccccaacatctccacaggctatggaggtctccatgaatgccctcacactaaaggta
tccccactcatcatcaacacggtgatcacaattctttcagtattgagccccgccgcagag
accccagaggagcttgatagcccagttcccgtagatctgtgggagaaacgaagttggaag
gacctaaaattctggttcctagaagagggtggagatgaagacacaaaatcattaactcca
ctggtaccccagggggagtcattgcagatgaatattaaatctatctgtctgactctggaa
gctggagtgggacaccgcaccatccccatgcttcttgccaagtcatcgttcaacggagat
gtgaaaaactggtccacattaattaatttacatagcaagcttgacctggaggttcactat
tacaatgagatcatgggagtgtgggaaccgctgctggagccattagaagatgagacagga
gagggtttcagaccctggagactggttttaaagatgaaaaagaaaccagtgagtttccca
ggactgtctgatgaggtggattaccaaatcccagactataaaacagtcattgtcatcagc
agtaaagaccagctcaacatcacactttctaaatgtggactaactatgctcagtcacctg
ggccaggcatttgcggaggctgccaaacagacatcagactctttccagaaggaagaggct
ccgtttgtagtcaaaaaccgcctgggccttccagtctctgtccgctacagtgaaatgttt
tctcccatcggccaacagagcaccacattcactgtgaagctacaggatggtgaaacactt
ggcatggactattccactaagacagagtctgaccagttctctgcaatgatctcattatcc
ggaaaggagtactacattcagccaactccaatgggtcacacctcagccagtgtgatcccc
ctgatcaaggtgggcaaggggatgtacagtgttgtgcacacagagtcaggagtcacctgt
ttcctggtctgtcagatttcctctgtggagggcagcaaatacatcaagatccgctcacct
ttccagatcatcaatcattttcaaattccttttaaagtttttgaaggatccacatgtctg
ggtaaagctctccctaatgaagagttctgcgttccactggattcatataggtctgaactg
agtctacagccagtcctagtagatgacgatcagggtgagcagtttgagtgctcggaaggc
ttcagttatgaagatgtcagcatcgagccgcccaccaaacgcctcgagcagacctgccgt
cgccgtagtggtgagggaggagtgctaatggtcaatatggtgccggttaaggatgctgtg
acattcaaacacactggagatgttggagagaactttgatgtaccttttgtggtgcacttg
tggccctccatcctgctacggaacctccttccataccccatctcttacaaactaaaggac
agcggagtctctgctcctgaggccactctgaacccaggccactctgctcagctgtacact
gctgtcatcaaccagtccagtgttgatctttgtcttctaaactacctgtctcaggactgg
tcttctgtgtacagtttcctcagtgaccaagaagaaatcaccttcatagtattccagtct
gtgcgagatcctaatgaagacgacgaaggcccagagatgaagagagccgagttggacata
gctgtgcacgtcaaatatgacctgggacagatggtggttgctattcactcgccttactgg
atggtgaacaagacaaacaggctgctgcagtacaaagctgatgatattcaccgcaaacac
cccctggactatgacatgcccctgctcttctccttcaagccccgatacttcctgaaaaac
aacaaggttcgtctcatgatctcagacagcgaactgtctgacgaattttctctggataca
gttggaagccacggagatgtcaaatgtaaaggccggtacaaagattacctggtcggcgtg
aagattgaagccagcagcttcacgctgacccgcatcgtgacctttgtgccgttttacacg
ctggtgaacaaaactaaggaaagcgtgttcatatgcgaggacgggttggacaactggacc
gaggctcaaccagaagagtcgggtattccattctggcctgagaatgacaccaaacggctc
aagattaaggtggaaggctgcaccctgcctccctgctccatcgatttcacaagacaagaa
aactgtctgttgctccatatggacaactctcttggcgggatcatcgttgacgtaaacctg
tcggagcactcggccacgatccgattctcggagtaccacgacggtgccgccccgttcctc
ttaatcaaccacaccaaaggacagactctgcagttctatcagagtgcccggacagactcc
gcctgggttgctaacgacctgctcgacctctccttctcaatggaggaggacagttctcag
aaggaggaagagaaggatgagctggagcctgggaaagctgtgtattacacctgggctgaa
tccactgggtccagagagctgtgttggaagtgtgggacatacagtgggaagctcaagagc
gaggaggatgtgtgtctagacatcaacagtgaaaagaaactgtttgtgctctccttctat
gaaggtctccagcgtgtggtgctgttcacggaggaccaacacacctacaagctgctctgt
gagagcgagaaggtgcagctggctgagcaggaaatcctcctgtcgctacagaacatgggc
gtgtccctagtcaacaacaacagcagccaggaagtctcctttattgggatcacaagctct
gatgtggtttgggaactgaagccgaagaaaaagaaccgttggaagactctgagcaccaaa
gaaactgagatgctggagaacagctacaaacactacgtggacactgaacccttggacaac
ggcatcgtcgacctggaaaacggctaccaggtgtctttcacaccgaacggtgtggacatg
cggatgctgcagccgtgcagcgctcccctcaggaggcacttcctgccagcagtgaaggtg
gaatacagcgtgtcaccgcgacagagtgcctaccgtgtccaaatccaccgaattcagatc
cagaatcagcttcccggagccatcttcccctatgtgttctaccctgtaaagctacctaaa
tccatcaccatggactcagaacccaaacctcttactgacatcagcatcgtcaccagaaca
gccggacactctaacatctctcgcattaagtatttcaaggtgttgatccaagagatggac
ctgaagctggatcttggcttcctctacgccatactggacctgttctcacccgagaacgcc
agcgtcatgagcccggaacaggaggcggagctgtttgagacagatttggaaaacataaag
atggtcctgaacagtgtctctgccgctgacacctctcccatcagcctctacgagtatttt
cacatttcccccatcaagctgcacctgagtctctccctgagcaccggaggggaggacggg
atgaagcaggagcgagacacggagctcattcctgtgcagtcgctcaacctgctgctgaag
agcatcggtgccacgctcacggacgtgcaggacgttgtcttcaagttggccttctttgag
ttgaatttccaattttacaccactcagcagctccagtgggaggtgatcagacattattct
aagcaggctattaaacagatgtacgtgctggtgcttggcttggacgtacttgggaatcct
tttggcctgatcagggggctgtcagaaggattcgaagctttcttctatgagccgtatcag
ggagccatccagggacctgaggagtttgttgaaggaatggcacttggggtgaaagctctg
gtgggaggggccgtagggggtatagcgggcgcggcctcccgcatcacaggcgccatggcg
aagggtgtagcagccataacgatggatgaggaataccagcagaagagacgagaggctatg
aacagacagcccagtggcctcagagaggggctggccaggggtggaaagggactggtgtct
ggttttgtcagtgggatcacagggatcgtcaccaaaccaatcaaaggagcgcagcgggag
ggcgcagccggcttcttcaaagggtttggaaaaggtctggtgggtgcagtagccagaccc
accggaggcatcatcgacatggccagcagtactttccagggaatcaagagggcagcagag
acgtcacaagatgtcgagtccctgcgtccccctcgcttcatccacgaggacggcgtcata
cgcccgtataaggagagggaggggctcggcagtcagatgctccagaaaatcgagaacgga
cgttacgccaagtacaaatattttgcccacgcgaaggtcaatgagtccgacatcctcatg
atcaccaagcgtggaatcttttttgtgaccaaaggtacgtttggccagctcacctgtgag
tggcagtacctgtttgaagagttcaccaaggaccccatgatcgtcgagcaccgccgactt
cgcattgaagccaaagagagagtcaagtccgtcttccacgcaaaagagtttgggaagatc
atcaacttccgaacccccgagatagccaagtgggtcctcgccaaactggacgacgccaga
gagaatctgcccaaatag
DBGET
integrated database retrieval system
