Takifugu flavidus (sansaifugu): 130525612
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Entry
130525612 CDS
T09160
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130525612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130525612
Membrane trafficking [BR:
tfs04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130525612
Protein recycling
Other Rab GTPase associated proteins
130525612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
DUF4455
PqqD
Motif
Other DBs
NCBI-GeneID:
130525612
NCBI-ProteinID:
XP_056888584
LinkDB
All DBs
Position
5:7034913..7038517
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AA seq
470 aa
AA seq
DB search
MWTDKQRGIRVSQEELLCKNACGYYGNPAWQGFCSKCWREKSRTSGTPRQDTRMTGDGSP
VTFTKFEEKKNAEKGRRINTVRRLFWGTPSPPPKGPEPSESFAAVLKAYQNLEPGDFTGF
LKLLKSPASRRLQSRCTTFLDTMETNHDLPVQKQSDLVQDFYQSFAEYFSRGGTSGFHEA
QITQLMEHLEKLMMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWVTPEMLAVPFPNKKT
SASGDPFLPAITAIIEMDAKRAPQDKLACVSKCSQHIFEALSTSNSEPANADDFLSGLIY
VVLKANPPRLHSNMQYVIRFGLPHSLMAGESGYYFTNLSCAVAFIEKLDGPALNLTPEEF
EGYMQRRYTPGVGSRRQQVASDTQQLLDELKGRQERLDQGVDALKVELHQWVQAVHSQFE
EVTTQFSLVQQELSSQAENSQDVSSLSDEVSLQENSEDHSVVTAQGVVQE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagataagcaaagaggaattcgagtttctcaagaggaactattatgtaaaaat
gcgtgcgggtattatggaaaccctgcatggcaaggtttctgctccaagtgctggagagag
aagtcacgtacaagtggaaccccaagacaagacacaagaatgaccggtgacggttctccc
gtcaccttcaccaagtttgaggagaagaaaaatgctgaaaaaggtcgtagaatcaatact
gttaggaggctcttctggggtaccccatctcctcccccaaaaggaccagaaccctctgag
agctttgcagctgtattgaaagcctaccaaaaccttgagcctggagatttcactggcttc
ctgaagttgctgaagagtcctgcatcccgccgcttgcagtctcgatgcacaactttcctt
gacacaatggagactaatcatgatctgcccgtacagaaacagtctgatttagtgcaagat
ttctaccagtcctttgcagaatactttagcagggggggcacctcaggttttcatgaggct
cagatcacacagttaatggagcatctggagaagttaatgatgacgcggctgcacaagtgg
gttttttgccatgacagctgcgatgatgagcagaaggacctggctctacagaggaggatt
cgttccttaaactgggttactcccgagatgctcgctgtaccttttccaaataaaaagact
tctgcttcaggtgacccattccttcctgctataacagccataattgagatggatgcaaaa
cgagcacctcaggacaaacttgcttgcgtgtccaagtgcagtcagcacatatttgaagct
ctgtccacatccaacagtgagcctgctaacgctgatgacttcctgtcaggcttgatatac
gtggtcctaaaagccaatccacctcgcctacattctaatatgcagtatgtgattcgtttt
ggtctccctcacagtctgatggcaggagagagcggctactatttcacaaatttgtcttgt
gctgtggcatttattgaaaaactggatggaccagctctcaatctcactccagaggaattt
gagggctacatgcagcgtcgttacactcctggtgttgggagcagaaggcaacaggttgcc
agtgacacacaacaactgctggacgagctgaaagggagacaggagaggctcgaccaaggg
gtggatgccctcaaagtggagctacatcagtgggtccaagcagttcattcccagttcgaa
gaagtaacaacccagttttccctggtacagcaggaactatcctctcaggctgagaactca
caagatgtttcatccttatctgatgaagtgtcacttcaagaaaatagcgaagaccattct
gtggtaacagctcaaggtgtagttcaggaataa
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