Takifugu flavidus (sansaifugu): 130525695
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Entry
130525695 CDS
T09160
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130525695
03041 Spliceosome [BR:
tfs03041
]
130525695
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130525695
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130525695
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
130525695
NCBI-ProteinID:
XP_056888714
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All DBs
Position
5:10560086..10567338
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AA seq
392 aa
AA seq
DB search
MEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHAA
ASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSMRSSLSDHFHVFVGDLSPEITTDDVKAA
FGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK
PPAPKTTYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRV
FPDKGYSFVRFNSHESAAHAIVSVNGSSIEGHVVKCYWGKETPDMMNTMQQMPMPQQNKM
SFPAAQPYGQWGQWYGNGHQISQYVPNGWQVPTYGVYGHAWNQQGFNHLPASAGWTGMST
ITNGGVMEPTQGLNGSMLASQPGMGATGYPTH
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaccagcctagaacgttgtatgtggggaacctgtccagggatgtaactgaa
cctctcattctgcaggtctttacacagataggaccgtgcaagagctgtaaaatgatagtt
gatactgctggaaatgatccctactgctttgtggagttctatgaacacaggcatgctgct
gcctcattggcagctatgaatggaaggaaaataatgggtaaggaggtcaaagtgaactgg
gccacgacgccaaccagccagaaaaaagacacgagtatgcgatcgtccctttcagatcat
tttcacgtctttgttggagacctcagcccagaaataacgacagatgacgtcaaagctgcc
ttcggtccgtttggtaggatatcagatgctcgtgtggtgaaagatatggctacagggaaa
tccaaaggctatggcttcgtgtctttcttcaacaaatgggatgcggagaacgccatccaa
cagatgggtgggcagtggttaggaggccgacaaattcggaccaactgggccacaagaaag
ccccctgccccaaagaccacctacgagagcaactccaagcagttatgttttgatgacgtc
gttaaccagtccagccccagcaactgcaccgtctactgcggcggcgtcagcaccggactg
acagaacaactgatgaggcagaccttctctcccttcggacccatcatggagattagagtt
ttcccagacaaaggctattcatttgtgaggtttaactcccacgagtcagcagcccatgcc
attgtgtcagtgaatggctcatcaatagagggacacgtagtcaaatgctactggggcaaa
gagaccccggacatgatgaacacgatgcagcagatgcccatgccccagcagaacaagatg
agcttccccgcagcccagccctacggccagtggggccagtggtacggcaacgggcaccaa
atcagccagtacgtccccaatgggtggcaggtccccacctacggtgtgtacggccacgcc
tggaaccagcagggcttcaatcacttaccggccagtgctgggtggactggcatgagcacc
atcactaacggtggggtgatggagcctacacagggattgaatgggagtatgctagccagc
cagcctggtatgggagccacaggataccccacacactga
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