Takifugu flavidus (sansaifugu): 130525821
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Entry
130525821 CDS
T09160
Symbol
ptch1
Name
(RefSeq) protein patched homolog 1
KO
K06225
patched 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130525821 (ptch1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
130525821
NCBI-ProteinID:
XP_056889004
LinkDB
All DBs
Position
5:complement(8731923..8769037)
Genome browser
AA seq
1545 aa
AA seq
DB search
MASAANAPSEQENRDPERPRVTRRNRGHCVRNAPLDLEYLQRPSYCDAGFALEQISEGKA
TGRKAPLWLRAKFQRLLFRLGCYIQKNCGKFLVVGLMIFGAFAVGLRAANLETDVEKLWV
EVGGRVNQELKYTRQKIGEEAMFNPQLMIQTPREEGANVLTVEALLQHLESAIRVSRVHV
YLYNRHWKLEHLCYKSGELVTETHYMNQLIEGLHPCLIITPLDCFWEGAKLHTGMVYLQG
KSTLKWTSLDPKEFLEDMKRSNMRVDGFEEMLEKAGIGRGYMDRPCLNPTDPDCPLTAPN
KNTTKPFDVARVLTGGCHGLSRKYMHWQEELIVGGTTKNSSGSLLSAQALQTMFQLMTPK
QMFEHFRGYEEVSNINWNEEKAAAILEAWQRRYAEAVLQSVAANSSQKVLTFTTTTLEDI
LKSFSDVSVIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVTLSVAAGLGLCSL
LGITFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVAL
TSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRFDI
FCCFYSPCANHVIQIEPHVYMDGADGSRYRPPPSYHTPPPSYYTPPPSYSSPPPSYSSHS
FAQQTQITMQSTVQLRTEYDPRTQAFYTTAEPTSQISVQPINPTNDFYGSNAGTGSNNHD
NLNNNNGSRANVGSRSSAAYSHHHHAPPPASSVPHGDAASAASQGAENNSSTRDLLSQAG
EGPTGLRCIESPCSRWTFASFAERHYAPFLLQPTAKVVVIVLFLCLLGVSLYGTTQVRDG
LELTDIVPRDTSEYDFIGAQFKFFSFYNMYVVTQRADYAQNQPLLHQLHQRFHSVRYVLK
EDNGQLPRMWLHYLRDWLQGLQQAFDKDWEAGRITLNNYRNGSDDGVLAYKLLVQTGRRD
KPINLKQLTRQRLVDADGIINPGAFYIYLTAWVSNDPVAYAASQANIRPNPPEWLHDRSD
SMPKTPLSIPAAEPIEYAQFPFYLNGLRETPQFVEAIESVRAICNNYSRHGLPSYPNGYP
FLFWEQYVSLRHWLLLSISVVLACTFLVCALFLLNPWTAGIIVLVLSLMTVELFGFMGLM
GIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDRHKRAVLALEHMFAPVLDGAFSTL
LGVLMLAGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSYFGPYPEVSPVDGRSRLP
TPSSEAPPSTVHFSVRPRHPNATANASGAVSDSSDSEYSSNTTVSGISRELQNYSLPSHR
GRGRAEEQQYHLHTSRGRTARTGEERRSGSGHRRSARQPDPPAYVSSSVPSQGCDSGLQP
RATQRTSRDPTQLHWHVPPPARPRIDAFETATEAGGHYGSHGHREHLAGNRARSSHSSQH
LPHHHPNLPPFCQPITTVTASASVTVAVHPAPMPGQNPPASYPGYTATDSYSPPSQPTEV
PEPNFQDPHVPQDTEIGARGVKVEAMELQDLEFEVADRNSGRRAS
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctgctaatgcgccctctgagcaggaaaacagagaccccgaacggccgagg
gtaacgcggaggaacaggggccactgtgtccgcaacgcaccgctggatttggagtacttg
cagcggccgagctactgcgacgcgggcttcgctttggagcaaatatcagaggggaaggca
actgggaggaaagcacctctatggctgagggcgaagtttcagagacttttattcaggctg
ggctgttacatacaaaagaactgcgggaaatttttggtcgtgggcctgatgattttcgga
gcgttcgccgtgggcctcagggcagctaatttggagacggacgtggagaagctctgggtg
gaagttggggggcgtgtaaaccaggaactgaaatacacacggcaaaagataggtgaggag
gccatgtttaaccctcagttgatgatccagacgccgcgggaggaaggggccaatgttcta
acagtggaagcgctcctgcagcacctggagtcagctatccgagtcagcagagttcatgtt
tacctctacaacagacattggaaattagaacacttatgctacaaatcaggagaactagtc
acagaaactcattatatgaatcagctaatagaagggctacatccttgcctcatcatcacc
cccttggactgtttctgggaaggagccaagctccacactggaatggtctacctacaaggt
aaatcaacacttaaatggaccagcctcgaccccaaggagttcctggaagacatgaaaagg
tcaaacatgcgcgtggacggctttgaggaaatgttggaaaaggcaggcatcggccgcggc
tacatggacaggccctgtctgaaccccactgaccccgactgccccctcacagcgcccaac
aagaacacaactaagccctttgacgtggcccgggtcctgactggcggttgccacggtctg
tccaggaagtacatgcactggcaagaggagctgatcgttggagggaccaccaagaacagc
agtggatccctgctcagtgcccaggccctgcagactatgttccagctgatgactcccaag
cagatgtttgagcactttcgtggctacgaggaggtttccaacatcaactggaatgaagaa
aaggcagcagctatactggaggcctggcagaggagatacgctgaggctgtgctgcagagt
gtcgccgcaaattcgtcgcagaaggtcttgactttcaccaccaccaccctggaagacatt
ctcaagtccttctctgacgtcagtgtcattcgagtggccagtggatacctgctgatgctg
gcctatgcatgtctgactatgcttcggtgggactgtgccaagtctcagggggctgtaggg
ctggcaggcgtcctgttggtgacattgtctgtggcagctggcctgggcctctgctctctt
ctgggcatcaccttcaatgctgcaaccacacaggtgttgcccttcttggctctgggggtc
ggagtggatgacgtgttccttctcgctcatgctttcagtgaaactggacagaacaagcgg
atcccgtttgaggaccgtacgggcgagtgtttgaagaggacaggggccagtgtggctctc
acctccatcagtaatgtcacagccttcttcatggcggccctcatccctatcccagcgctg
cgagccttttccctacaggctgctgtggtggtggtgttcaactttgccatggtgctgctc
atctttcccgccatcctgagtatggatctgtaccgacgagaagacagacgttttgacatt
ttttgctgcttctacagcccgtgtgccaatcacgtgatccagatcgagccacatgtgtac
atggatggagcagatgggagtcgttaccgccctcccccgtcttatcacactccccctccg
tcgtactacactcccccaccgagttacagcagcccccctccgtcctacagcagccacagc
tttgcccagcagacccaaatcaccatgcagtctaccgttcagctcagaaccgagtacgac
ccgcggacacaggccttctacaccacggccgagcccacgtcccagatctccgtgcagccc
atcaatcctaccaatgacttttacggcagcaatgctggcactggcagcaacaatcacgat
aatctcaacaacaataacgggagtcgggctaatgtgggatcgcggagttccgccgcctac
tcccatcatcaccacgcacctcctcccgccagctctgttcctcatggtgacgcagcttct
gcagccagccagggcgcagagaacaacagctccacccgggacctgttgtcccaggctgga
gaaggcccgacaggcctgcgctgcatcgagtctccctgctcccgctggacctttgcctcg
tttgctgagaggcactacgctccttttcttctgcagcccaccgccaaggtggttgttatt
gtgctcttcctctgcctgctgggagtcagtttatacgggaccacccaggtgagggatggc
ctggaactgacggacatcgtgcccagagacaccagcgagtacgacttcatcggcgcccag
ttcaaattcttttccttctacaacatgtatgtggtgacacagcgggcagattacgcccag
aaccagcctctgctgcaccagctccaccagaggttccactctgtccgctatgtgctgaag
gaagacaatggacagctgccccgcatgtggctgcattacctgagggactggctgcaaggt
ctccagcaggcttttgataaggactgggaggctggccgcatcaccctcaacaactacagg
aacggatctgacgatggcgtccttgcatacaagctgttggtgcagacaggacgacgagac
aaaccaattaacctcaaacagctgactcgtcagaggcttgtggatgcagacggcatcatc
aacccaggtgctttctacatctacttaacggcctgggtgagcaacgaccccgtggcatac
gccgcctcacaggccaacattcgcccaaatcctccagagtggctccacgaccgcagcgac
tccatgcccaagacacccctcagcattccagctgctgagcccattgaatacgcacagttc
cccttctacctcaacgggctccgggagacgccgcagttcgtggaagccatcgagagcgtg
agagccatctgcaacaactacagccggcacggcctcccctcctaccctaatgggtacccg
ttcctgttctgggaacagtatgtcagtctgcgccattggcttttgctgtccatcagcgtc
gtgctcgcctgcacctttctcgtctgtgccctgttcctgcttaacccgtggaccgctggc
atcattgttttggtgctttctcttatgacggtggagctctttggcttcatggggctgatg
ggaatcaagctaagtgctgttcctgtggttattctcattgcctccgtgggcattggagtg
gagtttactgtccatgtggctctggcgttcctgactgccataggggatcgtcacaagcgg
gcagtgctggcattagagcacatgtttgcgccggtgctcgacggagccttttccaccctt
ttaggagtcctcatgctcgcgggctctgagtttgacttcattgtcaggtatttctttgca
gtgttggccatcctaacaattcttggagttcttaatggattagtccttcttccagtatta
ctatcatactttggaccctacccagaggtatcgccagttgatggccgtagccggctaccg
accccgtcctccgaggcccccccgagcaccgtccacttttcagtccgtcctcgccaccct
aacgcaaccgccaatgcctccggtgcagtttcagactcatctgactctgagtacagctcc
aacaccactgtatctgggatcagccgtgagctgcagaactacagcctgccttctcacaga
ggccgaggaagagccgaggagcagcagtaccacctacacaccagcagaggaagaacagcc
cggacaggggaggaaaggagatcaggatcagggcacaggcgctctgctaggcagcctgac
ccacctgcctatgtgtcttcttctgtcccctctcagggttgcgattccgggctccagccc
agggctacgcaacgcaccagcagggatcccacccagctgcactggcacgtcccgccccca
gcccgcccgcgcatagacgcttttgaaactgctactgaggctgggggccactatggctca
cacggacacagagaacacttagcaggcaacagagcccgctcttcccacagctcccagcac
cttccacaccaccaccctaacctccctccattctgccagcccatcaccacagtaacagca
tcagcctctgtcactgtcgccgtccacccggctcccatgcccggccagaacccccctgcc
tcttacccgggttacactgcaacagacagttacagcccaccatcacaaccgacagaggtg
ccggagcctaacttccaggacccacatgtgccacaggacactgaaattggggccagaggc
gtgaaggtggaagccatggagcttcaagatttggagtttgaggtagctgacaggaacagt
ggcagacgggcaagctga
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integrated database retrieval system
