Takifugu flavidus (sansaifugu): 130526187
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Entry
130526187 CDS
T09160
Symbol
pdlim5a
Name
(RefSeq) PDZ and LIM domain protein 5a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130526187 (pdlim5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
130526187 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
130526187 (pdlim5a)
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
130526187
NCBI-ProteinID:
XP_056889615
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Position
5:complement(7484061..7515430)
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AA seq
572 aa
AA seq
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MSSNYSVTLKGPAPWGFRLQGGKDFNLPLTISKLTDGGKAAKGGITVGDMVLSIDGIATE
GMNHLEAQNKIKSCTGNLSLTLQKAPSVPKPPPVAPKNARSDIIKPVALTHPPSQHHLYS
SGPSTLPNKAPRPYGGCGTECESPPSQSPFAPFIPSPSSAFTPSASYTSPLPPPPPPVSY
PSSSSASSSPSSPPVLVPPQPSVYNTPINLYSTENACEVAMGQRRGLMESQGGAQPLQLN
GVPRRHIVDTDIHFYHVPTHADASRKRITEDTEDWRPRTGTTQSRSFRILAQITGTENAQ
EQEAETTKKKNEEVPETEFNSHESPVVKTMIKGPPSTQGPRMGLITPSFSMKGNGSASAP
KGVVPARPAPQPHPKDEDSLVQMAEHIPAGTRTPMCAHCSMVIRGPFLVAMGKSWHKEEF
NCAHCQSSLAHTGFVEENGSVYCEHCYEEFFAPACSRCQAKILGEVINALKQTWHVYCFL
CACCQQPIRNNTFHLEDGEPYCEQDFYTLFGTGCHGCEFPVEAGDKFLEALGYTWHDTCF
ACAVCNKALEGQTFFSKKDKLLCKKHAHTLKL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaactacagcgtcaccctcaaaggtccggccccgtggggcttcaggctgcag
ggggggaaggactttaacctgcccctcaccatctccaagctgacggatggcggtaaagca
gccaaaggtggcatcaccgtgggagacatggttctgtccatcgacggcatcgccaccgag
ggcatgaaccacctggaggcccagaacaagatcaagagctgcactggcaacctcagcctc
actctgcagaaggctcccagtgttcccaaaccccctccagttgcaccaaagaacgccagg
tcagacatcatcaaaccggtggccctcacacacccaccgtcccagcaccacctttactcc
tccggcccctctaccctccccaacaaggcccccaggccgtatgggggctgtggaacggag
tgtgaatcgcctccctcccagtccccatttgcaccgttcattccatccccgtcctctgcg
tttactccctcggcctcctacactagcccacttcctccacctccacctcctgtctcgtac
ccatcctcctcctccgcctcctcctccccctcctccccccctgtcctggtccccccccag
ccatcggtgtacaacacaccgatcaacctgtactccactgagaacgcctgtgaggtggcc
atggggcagaggcggggcctgatggagagtcagggcggagcccagcctctgcagttaaat
ggagttcccaggagacacattgtggacacagacatccacttctaccacgtgcccactcat
gctgatgccagcaggaagcgcatcacggaggacacggaggactggcgtccccgtaccggc
accacccagtccagatcctttaggatcctagcccagatcacgggcaccgagaacgctcaa
gaacaggaggcagaaacaaccaagaagaagaatgaggaggtgccggagaccgaattcaac
agccacgagtctccagttgtcaagaccatgatcaaaggacccccatccacccagggaccc
cggatgggtttgatcaccccatccttcagtatgaagggtaacggcagtgccagtgcaccc
aagggtgttgtcccagctcggcctgcccctcagccccaccctaaagacgaggactctttg
gtccagatggcagaacacatcccagcaggaacccgcactcccatgtgtgcccactgcagc
atggtcatcagagggccgtttctggtagcgatggggaagtcgtggcataaggaggagttc
aactgcgcccactgccaatcgtctctggcacacactggctttgtggaggaaaacggatcc
gtctactgtgaacactgctacgaagagttcttcgctccggcctgcagtcgctgccaggcc
aagatcctgggggaggtgatcaatgccctcaagcaaacgtggcacgtctactgtttcctg
tgcgcctgctgccagcagccgatcagaaacaacaccttccacctcgaggacggagagccg
tactgtgaacaagacttctacactctgtttgggactgggtgccatggctgcgagttcccc
gtcgaggccggagacaagttcctggaggcgctgggctacacctggcacgatacctgcttc
gcctgtgccgtgtgcaacaaagctctggagggtcagacgttcttctccaagaaagacaaa
ctcctctgcaagaaacacgctcacacactgaagctctga
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