Takifugu flavidus (sansaifugu): 130526301
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Entry
130526301 CDS
T09160
Symbol
rnf180a
Name
(RefSeq) uncharacterized protein rnf180a isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130526301 (rnf180a)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130526301 (rnf180a)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130526301 (rnf180a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-RING_5
RNF111_N
RING_XB3-XBAT31
zf-RING_6
TcfC
Motif
Other DBs
NCBI-GeneID:
130526301
NCBI-ProteinID:
XP_056889825
LinkDB
All DBs
Position
5:8901146..8907100
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AA seq
514 aa
AA seq
DB search
MSSCVGASGVPGSSRAGDHVCEDTGEELNNINITCRAGRQRLGDAGPGGEGRSGGLEQLA
RPPLPGRKAHRKTHQGRWREGIQERELAEHVVDNERRRGLQRWTERTEAHAESSPFRQGR
EVIETLSGSNSDVLSNEVSEAAEGSSFQMGKSDTITSTVCLNAPSPRSPAGAMCSAPLHP
SIQTRSASLSSRTSAEEPHHYPCTSSREPDPFWVVVRTGAGAGTSSQNQHTRTPIPSVSG
SEQGEEEGEQEEEEEEEGEDGDGGGGGVMEVTSQGVTSVAVRPHAPAAERRMSKREKKRV
KYLRRRQRRREVWRQGQLQESQQSSTGNASGSSSGSSSEEEEGAGEREGYICAVCLDVYF
SPYMCHPCNHIFCEPCLRTLARNSPANTPCPLCRTVITHVFFQKELNQTARTFFPKEYLS
RKQNFQKASCAKWPLPSCRKLFHIFGGFQRQPATVARRQLPRGGGYQLDSLDFRGDARGW
RLDMDMVIIYIYSVNWVVGFFVFCFLCYLFFPSF
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctgcgtgggagcttctggtgttccaggttcaagcagggctggagatcatgtt
tgcgaggacaccggtgaggagctcaacaatatcaatatcacatgcagagcaggaagacaa
aggctaggggacgcaggcccgggaggagagggaaggtctggtggcctggagcagctggcg
aggcctccactgccaggacggaaggcccacaggaagacccaccaaggaagatggagagag
ggaatccaagagagggaactggctgaacacgtagtggacaatgagagaagaagagggcta
cagagatggactgaaaggaccgaggcgcatgctgaaagttccccgttcaggcagggacga
gaagttattgaaactttgtctggcagcaactctgacgtcctgtcaaatgaggtttcagaa
gctgctgaaggatccagcttccagatgggaaaaagtgacactatcacctcaaccgtctgt
ttaaatgccccgtctcctcggtcaccagcgggcgccatgtgctctgctcctcttcatcct
tccatccagactagatctgcatctctgtcatcccggacatcggctgaggagccgcaccat
tacccctgcacttcaagccgggagccagatccattctgggtggtggtgagaacaggggca
ggagctggcacatcgtcccaaaaccagcacactcggacccccattccatctgtcagcggc
tccgagcaaggtgaagaggaaggggagcaggaggaggaggaggaggaggagggagaagat
ggtgacgggggaggcggaggtgtgatggaggtgacgagccaaggcgtgacttcggtggct
gtgaggccacatgctcccgcagcagagaggaggatgagtaaacgggagaagaagagggtg
aagtatctgaggaggaggcagaggaggagggaggtgtggagacaaggtcaactgcaggag
agtcagcagagttccacagggaacgcatccggcagcagcagcggcagcagcagtgaggag
gaggagggcgcgggggagcgagaaggttacatctgcgcggtgtgcttggacgtctacttc
agtccttacatgtgtcacccctgcaaccacatcttctgtgaaccctgtctgaggacgctg
gcgaggaacagccccgccaacactccctgccccctctgcaggacggtcatcacacacgtc
ttcttccagaaggagctgaaccaaacggcaaggacgttcttcccgaaggaatacctctct
cggaagcagaacttccagaaggccagctgcgccaagtggcccctcccgagctgccggaag
ctcttccacatctttggaggctttcagagacagcctgccaccgtggccagacgtcagctc
ccccgcggtggaggctaccagctggacagcctggacttccggggtgatgctcgaggctgg
cgcttggacatggacatggtcatcatttacatctactcggtcaactgggtggtcggcttc
ttcgtcttctgcttcctctgttacctcttctttccttctttttga
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integrated database retrieval system
