Takifugu flavidus (sansaifugu): 130526359
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Entry
130526359 CDS
T09160
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130526359 (tfip11)
Spliceosome [BR:
tfs03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130526359 (tfip11)
Other components
Complex C specific factors
130526359 (tfip11)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
130526359
NCBI-ProteinID:
XP_056889929
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Position
5:complement(6003609..6008541)
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AA seq
830 aa
AA seq
DB search
MSMSHLYGRRDEDDEGVEVESFEVTDWDLANEFNPDRRKYRQTKEQATYGIWAERDSDED
ERPSFGNKKSKDYTAPVNFVSAGLRKTASEEKRQKEEGSDDSDGSGPSAPPLSRGTAPKK
LQMGNFGGTKHQRFAGGIQTGKGLGSWEKHTKGIGQKLLQKMGYQAGKGLGKNAQGILNP
IEAKVRKGKGAVGAYGNERTHQSLQDFPVVDSEEEEEKEFQKELGQWRKDPAGTGVKKKP
KYSYKTVDELKAKGKLAARSTAASAGELAQVKVIDMTGREQKVYYSYSQMSNKHSVPHEG
PPSLTTRDQKGSGFAVPELEHNLQLLIDLTEQNILQSARRLQHEKDIVVSLTHEAKALQI
TLDTEQKAIQRMEAVQALVDRFPSEDMAPGEGPTLQECAEIFETLQSDYYEEYKTLGLGE
LAVPVVHPLLKEKLRSWDPLKDPSYCLEEIGQWRAILESRDLHSSGPDSNMDPYHRLLWE
VWIPVMRSCVLCWQPRIVRPMVECVEIWAPLLPRWITDYLLEQLLLPRLQREVDNWNPLT
DTVPIHSWIHPWLLLLQARLEPLYPPIRSKLANALQRWHPSDTSARLILQPWKDVFTPGA
WEAFMVKNIIPKLALCLEELVINPHQQQMEPFNWVMDWEGMLSPSSLVSLLVKNFFPKWL
QVLCLWVNSSNYDEIIKWYLGWKSMFSDLMLSQVVIKEKFNEALDIMNRAVSSGGGGYVQ
PGARENIAYLTQTERRKDFQYEAMQERRDSESVSHREVGSALANNFLDFIQVKADENNIV
FMPIVSKYHEGKQLYTFGRIVIYMDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtctcatctctatggacggagagatgaggatgatgaaggtgtggaggtggaa
agctttgaggtgacagactgggacctggccaatgagtttaacccagaccgccgcaaatac
aggcagaccaaggaacaagcaacatatggcatttgggctgaacgggactcggatgaggac
gaacggcctagttttggaaacaaaaaatccaaagattacactgcaccagtgaactttgtg
agtgctggtctgcgtaaaactgcatctgaagagaaacggcaaaaagaagaaggctcagat
gactctgatggtagcggtccttctgcacctcccctctctcgcggcactgcacccaaaaaa
cttcagatgggtaattttgggggtaccaagcaccagaggtttgcaggtggcatacagacg
ggtaaaggtctaggaagctgggagaagcatacaaaaggaattggacaaaaactgctgcag
aaaatgggataccaagcaggcaaaggcctgggcaagaatgctcaaggcattttaaatccc
attgaggcaaaggtacgtaaaggaaagggagccgtgggtgcttatggtaatgaacgaact
caccagagtcttcaggatttcccagtagttgactcagaggaagaggaagaaaaggaattt
cagaaagagttaggacagtggcgtaaggatcctgcaggcactggagtgaagaagaaacca
aagtactcttataaaactgtcgacgagctaaaagctaaaggaaagttggcagctcggagc
acagcggcgtccgcaggagagttggcgcaggtcaaggtgattgatatgactggaagagag
caaaaagtgtactacagttacagccagatgtccaacaagcacagtgttccacacgaaggt
ccccccagtctgactactcgggatcagaagggatctggctttgctgttcctgaactggag
cataatttgcagctgctgattgatctcacagagcagaacatattacagtctgccagacgt
ctgcagcatgagaaagacatagttgtgtctctgacccacgaggcaaaagcgctgcagatt
acactggacactgagcaaaaggcaatccagagaatggaggctgtacaggcactggtggat
cgttttccttctgaggacatggcaccaggggagggacccaccctgcaggagtgtgcagaa
atttttgaaactttacaatcagactattatgaagaatacaaaacattggggttgggagaa
cttgctgtacccgttgttcacccattgctgaaagaaaaacttcgatcatgggatcctctg
aaggacccctcttattgtctggaagagattggtcagtggagggccattctcgaatctaga
gaccttcactctagtgggccagattcaaacatggacccttaccatagacttctgtgggaa
gtttggatcccagtgatgcgttcgtgtgtgttatgctggcagccccgtattgtgagaccc
atggtggaatgtgtagaaatatgggctcctctcctcccccgctggatcactgattacttg
ttggagcagcttcttttgccacgtcttcagagagaggtggacaactggaaccctttaact
gacacagtacccatccactcctggatccacccttggctgcttctgcttcaggcacgtcta
gaaccactttacccaccaatcaggagcaaactagccaatgctttgcagaggtggcatccc
agtgacacttcagctcgcctcatcttgcagccctggaaagatgttttcactccaggggcc
tgggaggccttcatggtgaaaaacatcatccccaaactagccttgtgtctggaagaactg
gttatcaaccctcaccagcagcaaatggagccatttaattgggtgatggactgggaggga
atgctgtccccctccagccttgtgtccctgctggtcaaaaacttctttccaaagtggtta
caagtcctgtgtttgtgggtgaatagctctaactatgatgaaatcatcaaatggtacttg
ggctggaaaagtatgtttagcgatctcatgctttcacaagtggttattaaggagaagttt
aatgaggctttggacatcatgaaccgtgcagtgtcttccggcgggggtggatatgttcaa
cctggagcaagggagaatattgcatatctaacacagacggaaagacgaaaagactttcag
tatgaggcgatgcaggaacgccgagattctgagagtgtctctcacagagaagtcggctct
gctttggcaaataactttctggattttatccaggtcaaggcagatgagaacaacattgtc
tttatgcccatcgtgtccaaataccatgagggtaaacagttgtacacgtttggtcgcatt
gtcatttatatggacagaggggttgtgtttgtgcaaggagagaaaacttgggtgcccaca
tctttgcagagtctgatagatatggctaaatga
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