Takifugu flavidus (sansaifugu): 130526392
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Entry
130526392 CDS
T09160
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03030
DNA replication
tfs03410
Base excision repair
tfs03420
Nucleotide excision repair
tfs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130526392 (rfc5)
03410 Base excision repair
130526392 (rfc5)
03420 Nucleotide excision repair
130526392 (rfc5)
03430 Mismatch repair
130526392 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfs03032
]
130526392 (rfc5)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130526392 (rfc5)
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130526392 (rfc5)
DNA replication proteins [BR:
tfs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130526392 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
130526392 (rfc5)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130526392 (rfc5)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130526392 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
130526392 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_24
AAA_14
RuvB_N
ResIII
AAA_assoc_2
AAA_16
DEAD
DUF815
PhoH
TIP49
AAA_7
ATPase_2
AAA_5
AAA_19
AAA_30
DNAX_ATPase_lid
nSTAND3
AAA_2
Thioredoxin_6
AAA_25
Glyco_hydro_57
AAA_3
DUF4119
Motif
Other DBs
NCBI-GeneID:
130526392
NCBI-ProteinID:
XP_056890007
LinkDB
All DBs
Position
5:complement(4168921..4172064)
Genome browser
AA seq
335 aa
AA seq
DB search
MSSNSKTPLQKRNLPWVEKYRPQKLDDLISHRDILSTIQKFINEDKLPHLLFYGPPGTGK
TSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EHVIQQESIDITPDGMKAIVTLSSGDMRRSLNILQSTSMAYGKVTEETAYNCTGHPLRSD
IANILDWALNKDFTTAYKQILELKTLKGLALQDILTEVHLLIHRVDFPPDIRIGLLIKLA
DVEHRLASGTDEKIQLSSMVAAFQAVRDFVASEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaacagtaaaacacccttacagaagcgaaacttaccctgggtagagaaatac
agaccgcagaaactcgacgatctgatctcccacagagacattctcagcaccattcagaag
tttatcaacgaggacaagctcccacatctcttgttctacggcccccccggaacagggaaa
acctccaccattctggcctgtgccagacagctgtacaaggacaaagagttcaactccatg
gttttagagttaaatgcatcagacgaccgaggtatcgacgtcgtacgtggtccaattttg
agttttgccagcaccaggaccattttcaagaagggcttcaagttggtgattctggacgag
gctgatgccatgacccaggatgcccagaatgcactgcggcgagtgatcgagaagtttaca
gaaaacactcgcttctgtctcatctgcaactacctgtccaagatcatcccagctctgcag
tcccggtgcaccaggttccgcttcggcccgctgtccccagatcagatgatcccccggctg
gagcatgtaatccagcaggaaagcattgacataactccagacggaatgaaggccattgtg
actttatcatcgggcgacatgagaaggtctctcaacatattgcagagcaccagcatggct
tacgggaaggtcacagaggaaacggcgtacaactgcacaggtcaccccctccgttcagat
atagccaacatcctggactgggccctcaacaaagatttcaccaccgcgtacaagcaaatc
ctggaactcaagactctgaaaggtttggccctgcaggacattctaactgaggttcacctg
ctgatacacagagttgactttcctccggatatccgaattggcctgctcatcaaactggct
gacgtggagcacagactggcctcagggaccgatgagaagatccagctcagctccatggtc
gcagccttccaggcggtgagagacttcgtggcgagcgaggcctcgtaa
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