Takifugu flavidus (sansaifugu): 130526417
Help
Entry
130526417 CDS
T09160
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130526417 (snapc4)
03021 Transcription machinery [BR:
tfs03021
]
130526417 (snapc4)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
130526417 (snapc4)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
130526417 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Rap1_C
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
130526417
NCBI-ProteinID:
XP_056890043
LinkDB
All DBs
Position
5:complement(13667923..13683322)
Genome browser
AA seq
1534 aa
AA seq
DB search
MKEIVFKERREEIRSAEDMSLSVSARRDLIQQQVQELEQSLSVTHTDLELLSSETDEGTD
DESDGGTQSVAVLLAERDKIQKEIQNLEDVLGPHSPVCVSGNSLNNLSPWKCDQQMSLPV
FLYVVCSDADRSSSSDESELGLALTVESCLQVNLVYQQVVQEALEKLETLLRQNEKQQKE
VVSQLSGPIKEPHREPCPTSSYQIPINMFLGRFLKPYFKDKLTGLGPPANQESKEKSSRM
TGCLDNKKVKRWESWQKTLLIHSVSRDGLRRQIQPKLSKVDYLSQKLLSACGSEKQQLRE
QIDGLEREIELLREKKEGELIGDRYEDLDWQKISNIDFEGTRDAEDLRCFWQNFLHPSIN
KSGWSQEEVDTLKQLSRKYEERHWETIAAELGTGRTGFMCLQTYQRFASDSLKRCSWTTA
EDTLLKELVEKMRIGNFIPYTQMSYFMEGRDPAQLIYRWNNVLDPRLRKGPWTPEEDQLL
LRAVSRYGEKDWWKIRMEVPGRHDGACRDRYFESLKAETRKGAFDKQETESLRKLVEKHG
VGRWAKIAAEIPHRTDAQCLREWRKLNRIPPCPTKVKKKKKVSKPAKIKRYRSNAPAQKI
SKRQTKLDKDMEKEIREEEEEMIVEYMDSDEEGKKKRKKLKAVMDQSSSVEVEKEVKEEK
KEVMYSFPPMPEWTPAENPPAFTVLQFRPAEFPSPYQAQDTKNIRSTILGQYGRSVIIGP
PPVEQRLEKFFNTSTLMVTSDQLQAHLSHQADKFRPAVKVPPNTMPRSTHRRMDYELKAS
VTPWIGNLMIPSRSTVTTAAKLREQGQKKVLSSTAIFLLFLQTMNVDSVGCKEIIKKRKS
EMIFPPSPVLSSQLKDPKTLAGMLQRRRQKQRLQDFQIQPSLHLEQVQQQQQKQLLHPSP
CHQPTTAVPPQASSLQGLAATHQNHSGTVRQLPPQMNPVLPRAVFIPPSSVPSLQLLTPT
FITPPTSSPSVIMAFPFPLSPGPIGPPVSALLVSGKTSASASASPDLRVSSPLIDTGPDT
HKVVSLCMLPPSAAPVRQNVVPDHKPACSDTTLSRAQEHLAPPQPILPTAASSLTSPFHD
HNYTADLNASPTGNFDSRMRKQRGKESNRTSSSDGQHGVETGQSVGRFLEADCKPASVVV
GKRLRKLSQRARAFQEASKAKAERKKKRSSPSCKNHHHFCSPDRFLLPRLGGRADQTVSV
MGTALMEMSPLLGLPFTLVQKDSDLPSVIHPATAGPQPPYLKLSSPLNPTPLPSRSILYP
VQIPASPPLVFTTPSHHKKMPLPFKLNFDPSLIFSHSHGAVGDWLSDRRGVVVPGVDVAL
PYLPPFVSNLTTLSVLLHAKNSLTKSSLRLLSQVLETRHPQTKPKPCSTTTVTTQPPDLP
ASAAEPTSAPSMSPTLQRGALEEAGLVAAVRQLVAERFSSNPAYHLLKARFLSCFTVPAL
LASIQPVTETTVLQHTSQEEEEEEEEEEEEQQQQLKKIYETGKRERAERSSLQLQGSGAP
ANHFSGITSTLSIQSETELNLPRLAENSDLQCPG
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaatagtttttaaagaaagacgagaggagattagatctgccgaagacatgtct
ctctctgtgtcggcccggagagacctgattcaacagcaggtgcaggagttggagcagagt
ctgtctgtaacacacactgacctggagcttctgagcagtgagacagatgaaggtactgat
gatgagtcggatgggggtacacagtctgtagcagttcttctagccgagagagacaagatt
cagaaggagatccaaaaccttgaggatgtcttgggaccacatagtcctgtctgtgtgtca
ggtaatagtcttaacaatctgtctccatggaaatgtgaccaacagatgtcgctacctgtc
tttttgtatgttgtgtgctcagatgctgacagaagcagcagcagcgatgagagtgagctt
ggtcttgccttgacagtggaatcttgtctccaagtgaacctcgtctaccagcaggtggtt
caggaggctctggagaagttggagacactcctgagacagaatgagaagcagcagaaggag
gtggtgtctcagctgtctggaccaattaaagaacctcacagagaaccgtgtccaacctcc
tcataccagattccaatcaatatgtttctgggtcgcttccttaaaccctatttcaaggac
aaactgacaggactggggccaccagccaatcaggagtcaaaggagaagagcagcagaatg
actggttgtcttgacaataagaaagtgaagagatgggagagctggcagaagactttactg
attcactcagtatccagggacggtctcaggagacaaatccagcccaaactctccaaggta
gactacctgagtcagaagctgctgtcagcttgtggaagtgaaaagcagcagttaagagag
cagatagatggcctggagagagagattgaattgctcagagagaagaaggagggagagcta
attggggatcgatacgaagaccttgattggcagaaaatttcaaatattgattttgaagga
acaagggatgcagaggaccttcgctgcttctggcaaaacttcctccacccgtctatcaat
aaaagtgggtggagtcaggaagaggttgacacactgaaacagctcagcaggaagtatgaa
gaaaggcactgggagactattgctgcagagctggggacgggtaggacaggcttcatgtgt
ctacagacctatcagcgtttcgcctctgactcacttaaacgctgcagctggacaacggct
gaagatactctgttgaaagaacttgtggaaaaaatgaggattgggaacttcatcccatac
acacagatgagctatttcatggagggtcgtgatccagctcaactgatctataggtggaac
aatgtgttggatccaaggttgagaaaaggtccatggactcctgaagaggaccagttgtta
ttgcgggcagtatctcggtatggagaaaaggactggtggaaaatcagaatggaggttccc
ggtcgtcatgacggtgcctgtagagacaggtattttgagagtctcaaggcagaaacaagg
aaaggagcttttgacaaacaggagaccgagtcactgcggaaactagtggagaaacatgga
gttggccgctgggcaaagatagcagcagagattcctcaccgtaccgatgctcagtgtctt
cgagagtggaggaagctgaacagaatacctccgtgtcccactaaggtaaagaaaaagaaa
aaagttagtaaacctgcaaaaataaagaggtacaggagcaatgccccagctcagaaaata
agcaaaaggcagacaaaactggacaaggatatggaaaaggagatcagggaggaggaggag
gagatgattgtagagtacatggacagtgatgaagaggggaagaagaagagaaagaaacta
aaggcggtgatggaccaatcaagcagtgtggaagtggagaaggaggtcaaggaggagaag
aaggaggtgatgtactccttccccccaatgccagagtggactccagcagaaaatcctcca
gccttcacagtcctccaatttcggccagcagagtttccatccccttaccaggcccaggat
acaaaaaacatccgttccaccattctgggacaatatggacgttctgtcatcataggacct
ccccctgtggaacagcgtctggagaaattcttcaacacctctactctgatggtaacatct
gaccaactgcaagctcacctttcccaccaggcagacaaattccggccagcagttaaagtt
ccacccaacaccatgccacggtccacacacaggaggatggactatgagctgaaggcatca
gtaacaccctggattggaaacctgatgatcccctctcgatccacggtgaccactgctgcc
aagctcagggagcaaggacagaagaaagtgctctcctccactgccatcttcctgcttttc
ctccaaaccatgaatgtggactctgtgggctgcaaggaaattatcaagaagagaaaaagt
gaaatgatatttccaccatctccagttttatcctcccagctaaaggatccaaaaactctg
gcagggatgctgcaaaggaggaggcagaagcagaggctgcaagactttcagatacagcca
agtctacacctagagcaggtccagcagcagcagcagaagcaattgcttcatccatctcca
tgtcaccaaccaactacagctgtcccaccacaagcctcttctcttcagggcctcgctgca
acccatcagaatcactccggaactgttcgtcagttacctccccagatgaatcctgtgttg
cctagagctgtcttcattcctccatcttctgttccctcccttcaactcctaactcctact
ttcatcacccctcccacttcatctcctagtgtgatcatggccttcccattccctctttct
cccggaccgattggtcctcctgtatctgccctcttagtgtctgggaagacatcagccagt
gctagtgcttctccagacctccgggtttcctctcctcttattgacactggcccagacaca
cacaaagttgtctctttgtgtatgctacccccctcagctgctcccgtcaggcagaatgtt
gttcctgaccacaaacctgcctgctctgacaccactctgtcacgagcccaagaacattta
gccccacctcagcccattttacccacagctgcctcctctttaacctcaccttttcatgat
cacaactataccgctgatctcaatgcatctcctaccggtaactttgactcaagaatgagg
aaacagagagggaaggagtcgaacagaacaagcagctctgatggccagcatggagttgag
acaggtcaatcagttggaaggtttcttgaagctgactgtaaaccagcttcagttgtggta
gggaagaggcttcggaagctgagtcagagagcaagagcttttcaagaagcatctaaggca
aaggctgaaagaaagaaaaagagatcttccccttcttgtaagaatcaccaccatttttgt
agcccagataggtttctactaccgcggttgggaggaagggctgatcaaactgtgtcggtc
atgggcactgctttgatggaaatgtctccactccttggcctcccatttacactggtacag
aaagattcagacctgccttcagtcatacacccagctacagctggcccacagccaccctac
ctaaaactgtcctcccccctaaatcccactccccttccttcacgatccatactgtatcct
gtccaaattccagcttcacctccactggttttcacgactccctcccaccacaaaaaaatg
ccccttccttttaagctcaactttgatccatccctgatcttttcacactcacatggtgca
gttggtgattggctgagtgatcggagaggggtggtggtccccggagtagatgtggctctt
ccttatctacccccctttgtcagcaatctgaccaccctcagtgtgctgctccatgccaag
aactctttgaccaaatcttccttgcggctactgagtcaggtattagaaaccagacacccc
caaaccaagcctaaaccatgcagcaccaccaccgtaaccacacagcccccagacctgcca
gcctctgccgccgaacctacatcagctccctccatgagcccaacgcttcagaggggagcg
ctggaggaggcggggcttgtggcagcagtacgtcagctggtggccgagcggttttcaagt
aaccctgcctaccatttactgaaggcccgcttcctgtcctgcttcactgtccccgccctc
ctggcttctatacaaccggtcacggagacgactgtgctccaacataccagccaggaggaa
gaggaagaagaagaagaagaagaggaggagcagcagcagcagctgaaaaaaatttatgaa
acaggaaaaagagagagagctgagagatcatcactgcagttgcaagggtcaggagctcca
gccaatcatttttcaggaattactagcaccctctcaatccagagtgaaacagaactgaac
ctgcccaggctggctgagaactctgacctccagtgtccaggctaa
DBGET
integrated database retrieval system
