Takifugu flavidus (sansaifugu): 130526474
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Entry
130526474 CDS
T09160
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04137
Mitophagy - animal
tfs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130526474 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130526474 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130526474 (vcp)
03009 Ribosome biogenesis [BR:
tfs03009
]
130526474 (vcp)
04131 Membrane trafficking [BR:
tfs04131
]
130526474 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfs04147
]
130526474 (vcp)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130526474 (vcp)
Ribosome biogenesis [BR:
tfs03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
130526474 (vcp)
Membrane trafficking [BR:
tfs04131
]
SNARE
SNARE associated proteins
Others
130526474 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
130526474 (vcp)
Exosome [BR:
tfs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130526474 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
SLFN-g3_helicase
Viral_helicase1
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
130526474
NCBI-ProteinID:
XP_056890156
LinkDB
All DBs
Position
5:complement(2729635..2737552)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWDDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISQDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSTAGA
SGPSHGTGGTGSGPVFNEDNDDDLYA
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcatccggaggggaatctaaaaatgatgacttatccactgcgattctgaaacaaaag
aacagacccaacagactcatcgtagatgaatccatcaatgaagacaacagtgtggtttct
ctttcacagaccaagatggatgaacttcagctctttcgtggcgacacagtgctgatgaag
gggaagaagaggcgggagactgtgtgtatcgtgctgtccgacgacacctgctccgatgaa
aaggtccgcatgaacagggtggtccgcaacaatctgagggtgcggctgggtgacgtcatc
agtattcagccgtgtcccgatgtgaagtacggaaaaaggattcacgtccttcccatagac
gacacagtagagggaatcactggcaacctgtttgaagtctacctaaagccatacttcctg
gaggcctacaggccgatccgcaaaggcgacattttcctggtgagagggggcatgcgtgcc
gtggagttcaaagtggtggagaccgatccttctccttactgcatcgtggctcctgatacc
gtcattcattgtgagggagagcccatcaggagggaggatgaggaagagtcgctgaacgag
gtgggctatgatgacattggaggagtgaggaagcagctggctcagattaaagagatggtg
gagctgccgctgcgacaccccgctctgttcaaggccatcggagtgaagcctcctcgtgga
atcctcctgtacggacctcctggaactgggaagactctgattgccagagctgttgctaat
gaaacgggagctttcttcttcctgattaacggccctgagatcatgagcaagctggccgga
gagagcgagagtaacctgagaaaggcctttgaagaagcggagaagaatgcccctgccatc
atctttattgatgagctggatgctattgctcctaaaagggagaagacccacggagaggtt
gagaggcgcattgtctcccagctgctgactctgatggatggtctgaaacagagagcccac
gtcatcgtcatggctgccactaacagacccaacagcatcgatccagcactcaggagattt
ggccgttttgacagggaagtggacatcggcatccccgacgccaccgggagattagagatt
cttcagattcacaccaagaacatgaaactggctgacgacgttgacttggagcaggtcgct
aacgagacccacggccatgtcggtgcagatctggctgctctctgctccgaggctgcgctg
caggccatcaggaagaagatggacctgattgaccttgaggatgagaccatcgatgctgaa
gtcatgaactcgctcgccgtcactatggatgacttcaagtgggccctgagccagagcaac
ccatctgccctgagggagacggtcgtggaggtgcccaacatcacctgggatgatatcgga
ggtctggatgatgtcaagagagagctccaggagctggttcagtacccagtggagcatcca
gacaagttcctcaagtttggaatgacgccctccaaaggcgtgctgttctacgggccacct
ggttgtggtaagactcttctggccaaagccattgccaacgagtgccaggccaacttcatc
tccatcaaaggccccgagctgctcaccatgtggtttggagagtcggaggccaacgtcaga
gagatctttgacaaggctcgccaggcggcgccctgcgttctcttcttcgatgagctggac
tccatagctaaagcccgtggcggcaacgtgggagacggcggcggagcggccgaccgtgtc
atcaaccagatcctgactgagatggatggaatgtccagtaagaagaacgtcttcatcatc
ggcgccacaaacagaccagacatcatcgaccccgccattttgagacccggccgcctggac
cagctcatctacatccccctgcccgacgagaagagcaggataagcatcctgaaagccaac
ctccgcaagagccccatcagccaggacgtggacctggacttcctggcaaagatgaccaat
ggcttttctggagccgatctcacagagatctgccagcgagcgtgtaagctggcgatcaga
gaaagcatcgagagcgagatccgcagagagagggagcggcagaccaacccgtcggccatg
gaggtggaagaggacgatcccgttcccgagatcaggaaggatcactttgaggaggcgatg
cgttttgcccgtcgctccgtcagcgacaacgacatccgcaaatacgagatgtttgcacag
acgctgcagcagagccgaggcttcggcagtttcaggtttccctccagcaccgcaggggcc
agtggtccaagtcatggcactggtggaactgggagcggcccagtctttaatgaggataat
gacgacgacctttacgcttaa
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integrated database retrieval system
