Takifugu flavidus (sansaifugu): 130526651
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Entry
130526651 CDS
T09160
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130526651 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130526651 (taf5)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130526651 (taf5)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130526651 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
130526651 (taf5)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130526651 (taf5)
STAGA complex
130526651 (taf5)
TFTC complex
130526651 (taf5)
SAGA complex
130526651 (taf5)
SLIK complex
130526651 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
WD_LRWD1
LisH_TPL
CDK5RAP3
VPS8_N
VID27
IMUP
DUF1631
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
130526651
NCBI-ProteinID:
XP_056890379
LinkDB
All DBs
Position
6:complement(1586295..1590517)
Genome browser
AA seq
751 aa
AA seq
DB search
MAAVQGGIVDTVDKKDIKAEPSEDGIGNNNNNGNDNRMLSPSPSSSSSSGNNNNNNTAAA
ATVDQQTLVAVLQFLKKNKLNDSVEILRREAGLPEDSLDIKGSDPGAGGAGSANLEAVDA
ATLLNRVTVSASAAAQPQVKDSAGEDQPDVNVVLSAYSQQGDPALYQAYYSGLKRFIESV
LDCHRAELSQVFYPLFVHMYLELVYNNHENEAKAFFQKFSGDQECYYGDDLRVLSSLTKK
EHMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRS
KSQIDAMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKD
SMGSKSKKQDPNAPIQTRIPLPELKDSDKLDKIMYMKEATKRIRLGPDALPSICFYSFLN
AYQGLTGVDVTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIM
DEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPV
WDVSFSPHGYYFVSGGHDRVARLWATDHYQPLRIFSGHLADVTCTRFHPNSNYIATGSSD
RTIRMWDVLNGNCVRIFTGHKGPIHALDFSPSGKFLASGATDSRVLLWDIGHGLMVGELK
GHTDTVYTLKFSRDGEILASGSMDNTVRLWDATKAFDDLETDDFTAATGHIHLQDNSQEL
ILGTYMSKSTPVVHLHFTRRNLLLAAGAYNP
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgcagggtgggattgtcgacacggttgacaaaaaagacataaaagctgaa
ccatctgaggacggcattggcaataacaacaataatggaaacgacaatcggatgctatct
ccatcccccagctccagctcttcttctgggaacaataataacaacaacaccgcggcagca
gccacggtggaccagcagacgctggtggcggtcctgcagttcctcaaaaagaacaaactg
aacgattctgtcgaaattttgcggcgtgaagcgggattaccggaggattccctcgatata
aaaggaagcgatccaggcgcagggggtgcgggcagtgcgaacctcgaagccgtggatgcg
gccactcttctgaaccgagtgaccgtctcggcatcggctgccgctcagccgcaggtcaaa
gattctgcaggtgaagaccagccggatgtcaatgtggtgctgtcagcttacagccaacag
ggagatccagcactctatcaagcgtactacagcggcctgaagaggtttatagaatccgtt
ttagactgccacagagctgaactgtcccaggtcttctacccgctgtttgtacacatgtat
cttgagctggtgtacaacaatcatgaaaatgaggcaaaggcattctttcaaaagttcagt
ggagaccaggagtgctactatggagatgacctgcgtgttctgtccagcctgacaaaaaaa
gagcacatgagaggcaacgagaccctgctggacttccgtaccagcaagtttgtgctgcgc
atttccagagattcttaccaactgctgaagaggcacctgcaggagcgacagaacaaccag
atctggaacatcattcaggagcacctgtacatcgacatctttgatggaatgccacggagc
aagagtcaaatcgacgccatgtctggcagcctggctggagaagccaagcgcgaggccaac
aaggctaaggtttattatgggctgctgaaggagccagaaattgagctacctctagatgat
gaggatgaggaggcagagaatgaagagggtaaacccaagaagaagaaacccaagaaggac
agcatgggctctaagagcaagaaacaagatcccaatgcaccaatacagaccagaatacct
ctaccggaactaaaggattcagataagctggacaaaatcatgtacatgaaggaggctacc
aagaggatccgtctggggccagacgcccttccatccatttgtttttattcattcctcaat
gcataccagggtctgactggagtggacgtgacggatgactcgagcttgattgcggggggc
tttgctgactccacagtcagggtgtggagcgtcaccccgaaaaagctccgcaaggtcaag
tctgcagcagacttaaatctgattgacaaggagtccgatgacgtgctggagaggatcatg
gatgagaagacatccagcgagtcaaagattctccatggacacagtggcccagtgtatggt
gtcagtttcagtccagacagaaattacttgttgtcgagctctgaagatggaacagttcgg
ctgtggagtctccaaacctttacgtgtctagtgggttacaaaggccacaattatcccgtc
tgggatgtcagtttttccccacacggatactactttgtctcagggggacacgacagagtg
gcccgcctgtgggcaacagatcactaccagcctctgcggatattttcgggtcacctcgct
gacgtcacatgcacccgcttccaccccaactccaattacatcgccacggggtcatccgat
cgcaccatccggatgtgggatgtcctaaatggcaactgtgtccgcattttcaccgggcac
aaggggccgattcatgcactggatttctctcccagtgggaagttcttggcttcgggggcc
accgatagcagagtgctcctgtgggacattggtcacggactcatggtgggagagctgaaa
ggacacactgataccgtctacaccctgaagttcagtagagatggggagatccttgcctcc
ggttccatggacaacacggtgcgcctgtgggatgctacgaaagcatttgacgatttggag
actgatgatttcacagcagctacaggacacatacatttacaagacaattctcaggagctt
attcttggcacatacatgtctaaatctacgcccgtcgtgcacctccacttcacgcgcagg
aacctgctgctagcagccggtgcctacaacccgtga
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