Takifugu flavidus (sansaifugu): 130526727
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Entry
130526727 CDS
T09160
Symbol
tnrc6c2
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130526727 (tnrc6c2)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130526727 (tnrc6c2)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130526727 (tnrc6c2)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130526727 (tnrc6c2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
UBA_NBR1_C
RRM_occluded
Mei5_like
Motif
Other DBs
NCBI-GeneID:
130526727
NCBI-ProteinID:
XP_056890561
LinkDB
All DBs
Position
6:complement(13580448..13667041)
Genome browser
AA seq
1863 aa
AA seq
DB search
MEEKKKKKQEEKTKTDIAQKKVKAADQQPKVPEPEPTQPSLGPPPLHLYPTSPALPYSSP
SSSGNGKRASSSGQQTSQTPPQQPCQLSSASARYPPREVPPRFRQQEHKQLLKRGQPLPV
GALGVSAISSSAYSSTTTANGVTPNSTTTAVGKLHSDISIQSGPVGLYETSHWGASLPVD
SPSSANSWDKVIIDRSDTEAWPSISRSSDLNHPAVPECPVGSASSNQDTSAVTTTCSSSS
SLSMATGAAGQQAHYISLKANNNMTGPGSANVLTSNRGWGSDGKQDGVNSSRVGASSNWG
SPNFNLNLNPNANPSAWPALGHEVGGGGVVGSNGTSNTPSLPPGINGNGNIIKGSIGGPD
NGAGSWVGIVNANENDQQHSSAKTNLSFNMEPANTDGPNHANQQQQAQEPMSPIHGLTGW
GGQSPTESSQLNGDTAGSSIWGGGEAKAADSAKDSGWDTTSSGGHCAWGRQGSGGGSCGS
GGWGEWGKPSGDASKAWDVGDAGSSGSGQDQQIGSWGQQPGTAPASEGSGDSSEDPITSQ
RDRSSRMELTPLLPRQDLDPRVLCNTGWGQTPIRQHTVWEMEEVNSDDGKSTSSSDTLGG
SSSNSATSSTSGGTINLNMVPNQRPGSGGKSDNEGSSSSSWGAPPTHPRQSGSGWQEPPQ
SLNKTTNSSSGGWVDPSPHNGPRNGGSPTWGSEDKTPNWDNNVMKSQHNSWGDDPKSSHS
WSNIKGSSNGSTTGDWGEADIKDNGSSTTMWEDGGSGWKESPRGGNRGGGWGKPSPTVNK
NSWGETPRVNGVVQGGWGSSKPQESSSGSSTGSGGGGSIGSWGGPSSVKQNASSWGIAGK
PDQGVEPTGWEEPSPPSIRRKMEIDDGTSTWGDPTAYNKTVNMWDRNNPNNNPGNNGPPP
SKNSGVILPNSNNNHSITPGNNHHLSHHMHQHPQHCQPPNHLQHHGNNNGSPNNGNPSAG
PQGRPSHSNPGWGELPSVHSKSEPAWGEAASPTSTVDNGTSAWGKPTGGVAGWGDGCHEP
SGLYGRTNGPPASAPCKPGPKPMQDSWGNGEDMGHWDAEDGDMWNSPTSQESSSSCNSWG
NGPKKIPNKNKLGNKPDEVWIMNRLIKQLTDMGFPRDPAEEALKSNNMNLDQAMSALLEK
KMDLDKRGMGMSDYSNGMNKPIVCRPSALSKDPSDRTFLDKDGVLSDDAPPSPFLPSPSL
KLPLVNSSLSGQGLGQGNTGLAMQNLNNRQQIPSGMFGSSGAAQTRAMQQQPPQPPVPPL
SSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQQMTLLYQLQQLQVAY
QRLQIQQQMMQAQRNVSGPIRQQEQQVARTITNMQQQIQQHQRQLYQALLMKQQQLPSHS
SSSSSSAGLHHPGGPVSSKSILDPFTGSHQAPGLADSLHTKEPPSSPNAYNTYPLSGLNP
NMNVNCMEVGGLSLKEPSQPQSRLSQWTHSNSMDSLSGNSSNLENNLNKHGAISASMGPP
GKPPQLDDSYSPYSLMSSSESPTSPLVPPDSWGQGKSPNEKISNGTNINWPPEFCPGVPW
KGLQNIDPENDPNATPGSVPSGPTINTNIHDVNRYLLRDRNGGRTRGKLSDMKSTWSQGP
ISQSQASLSHELWKVPQGPRSTTAPSRPPPGLTNSKPSSTWSGNSLGLAPGWNGSYSSEG
TTWSTDSSNRTSSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSSKDE
SAKAQKSLHMCVLGNTTILAEFAGEEEVNRFFAQGQSLGANTTSWQANQGSNQNRMGAAQ
SHSIGQWSGGGGGKTSGGDLLWGGVPQYSSLWGPPSGEDARVIGSPTPINTLLPGDLLSG
ESM
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaaacaagaagaaaagaccaagacggacattgctcagaaa
aaggtgaaggctgctgatcaacaacccaaagtgccagaacctgaacccactcagcccagt
cttggcccaccaccccttcacctctaccccaccagccctgcgctgccctactcctcgcct
tcgtcttctggcaatggcaagcgcgcctcctcaagcggtcagcagacgtctcagactccc
cctcagcagccgtgccagttgtcctctgccagtgctcgctacccacccagagaggtaccc
ccacgcttccgccagcaggagcacaagcagctactgaagagaggccagccgctccctgtt
ggagctcttggtgtttccgccatctcctcctccgcttattcttctaccacaactgccaac
ggtgtcaccccgaactccaccacaacagctgttggtaaactgcactcagacatatccatc
cagagtggcccagttggcctgtatgagacctctcactggggcgcctctttaccagttgac
agcccctccagtgccaacagctgggacaaagtgattattgaccgaagtgacacagaagct
tggccatccatcagccgcagcagtgatctcaaccatccagcagtcccagaatgccccgtg
ggctcagctagctctaaccaagacacaagtgctgtcaccaccacctgtagtagtagtagt
tccctgagtatggcaacaggtgctgcaggccaacaggcccactacatctctctcaaagca
aataataacatgacgggaccgggatcagccaacgtattaaccagtaatagaggctggggc
tccgacggtaaacaggatggtgtaaatagtagtcgggtaggagcatcaagtaactggggc
tctcccaattttaacctgaacctcaaccctaatgccaacccatctgcctggcctgccctg
ggccatgaagttggcggaggtggcgttgttggctcaaatggcacatcgaacactccatcc
cttccgccgggtattaatggtaatggcaacattataaaagggagcattggaggtcctgat
aatggtgccggaagctgggttggcatagtaaatgctaatgagaatgatcaacagcactct
tcagcaaaaacgaacttgtcctttaatatggaacctgctaacactgatggaccaaaccac
gctaatcaacagcagcaagctcaggagcctatgagccctatacacgggttaactggttgg
ggaggccagtcacccactgaatcatcccagcttaatggggacacggcaggaagctctata
tggggaggcggagaagccaaggcagctgactctgccaaggactcgggctgggacacaact
tcctctggaggccattgcgcctggggtcgacaaggcagcggcggagggagttgtggaagt
ggcggctggggcgagtggggaaagccctctggagatgcatctaaagcatgggacgtagga
gatgctggcagctctggttcaggccaagaccaacagattggctcatggggccaacagcct
ggaacagccccggcaagtgaaggtagtggtgacagcagtgaagatcccatcacctctcag
agagacaggtcttctcgcatggagttaacccctttgctaccccgtcaggacttggaccca
agagttctgtgtaacacgggctggggacagacccccattcgacaacatactgtatgggag
atggaagaagtcaactctgatgatggaaagagcaccagtagctcagacaccttgggtggc
tcaagttctaatagtgccacctcatcaaccagtggaggtaccatcaacttgaatatggtt
cccaatcaaaggcctgggtctggggggaaaagtgacaatgaaggatcatcgtcgtccagc
tggggagccccaccaacacatccaagacagagcgggtcagggtggcaggagcccccacag
tcacttaacaaaacaacaaatagcagcagcggtggctgggtggacccttcaccacacaat
ggtcctagaaatggaggttcaccaacctggggttcagaggacaagacgcccaactgggac
aataatgtgatgaaaagtcagcataatagctggggagatgaccctaaaagttcccacagt
tggagcaacattaaaggcagctctaatggctcgaccacaggagattggggagaagcagac
atcaaggacaacggctcctccactaccatgtgggaagatggaggaagtgggtggaaggaa
agccccagaggtggaaacagaggtggaggctggggtaagccttcccctacagttaataaa
aacagttggggcgagaccccacgtgtcaacggtgtagtgcagggaggctggggctcttcc
aaaccccaagaaagtagtagtggcagcagtactggcagcggaggaggtggcagcattggt
tcctggggtggcccaagctctgtaaagcagaatgcatctagctggggcattgccggcaaa
cccgatcagggcgttgaacccacaggctgggaagaaccctctccaccctctattcgtagg
aaaatggagattgacgatggaacatccacgtggggcgatcccactgcttacaacaagact
gtcaacatgtgggatcgtaataatcccaacaataacccaggcaacaatggcccacctccc
agcaagaatagtggagtgattctccccaacagtaataacaatcactctatcacccctgga
aacaatcaccatctctctcaccacatgcaccaacatccccaacactgccaacctcccaat
cacctgcagcatcacggaaacaacaacggttcacctaacaatggcaatccaagcgcaggc
ccacaaggaagaccgtcccactctaacccaggatggggggagcttcctagtgtccattct
aagtcagaacctgcttggggtgaagcagcgtctcctacatcaactgtggacaatggcact
tcggcctggggcaagcccactgggggagtggcaggatggggagacggttgccatgagcct
tctggactgtatgggcgcaccaatggacccccagcatctgcaccttgcaagccaggaccc
aaacctatgcaagatagctggggaaatggagaagatatgggccactgggatgcagaagat
ggggatatgtggaatagccccacctcccaggagagcagctcttcttgcaattcctggggt
aatggacccaagaagatcccaaacaagaataagcttggcaacaagccagatgaggtttgg
attatgaaccgtctcatcaaacagttgactgacatgggctttccgagagaccctgctgag
gaggctctgaagagcaacaatatgaacctcgatcaggccatgagcgctctgttggagaag
aagatggacctggacaagcgtggaatgggcatgtctgattacagtaacggcatgaacaag
cccattgtgtgccggccctctgcactctccaaagatccctctgaccgcacctttcttgac
aaggatggtgtcttgtcagacgatgcccccccatcaccatttctgccttcccccagcctg
aagctccccctggtcaacagtagcctttctgggcagggtctgggacagggcaacacgggg
ctggccatgcaaaacttgaacaacagacagcagataccgagtggaatgtttggcagtagt
ggagccgcacaaacccgggccatgcagcagcagcctcctcagccaccagtgccacctctc
agctcctcccagcctagtctacgtgctcaagtgcctcagtttctctcccctcaggtccaa
gcacagcttttgcagtttgcagcaaaaaacattggtctgaatcctgcacttttaacctca
ccaataaaccctcaacaaatgactcttttgtaccaacttcagcaactgcaagtggcgtac
cagcgtttacaaatccagcagcagatgatgcaggcgcaacgcaatgtttctggccccatt
cgacaacaagagcagcaagttgcacgtacaatcaccaacatgcagcagcagatccagcag
catcagcgccagctgtaccaggcactgctgatgaagcagcagcagcttccctctcattcc
tcctcctcttcttcctcggctggtctgcatcatcccggtggccctgtctccagtaaatca
atcctggatcccttcacaggctcccatcaggccccgggcctcgccgactcactgcacacc
aaagagccgccgtcttcgcccaatgcctacaacacctatcctctctctggactgaatcca
aacatgaatgtcaattgcatggaggtggggggtttatccttgaaggaaccctctcaaccc
caatcccgcctgtcccagtggacacactccaactccatggacagcctgtctggcaactcc
tcaaacttggaaaacaacctcaataagcacggtgccatatctgcttctatgggccctcct
gggaagccaccccagctggatgactcttacagcccttacagtctaatgtcaagttccgag
tctcccaccagccccctggtgcccccagacagctggggccagggcaagagccccaatgaa
aagatctctaatgggaccaacattaactggcccccagaattctgcccaggtgtgccatgg
aagggccttcagaacatcgacccagagaatgatcccaacgcgacccctggcagcgtcccc
agcggtcccaccatcaacaccaacatccatgacgttaatcgatacctcctacgggacagg
aacggaggtaggaccagaggtaaactgtccgatatgaagtccacctggtcacaggggccc
atctcccagagccaagcctctctgtcacacgagttatggaaagttcctcaggggccacgc
agcaccacagccccttcacgaccgccaccaggactcacaaacagcaagccctcttctact
tggagtggcaactctctgggcctggctccaggttggaatggttcttactcctctgaagga
accacctggagtaccgacagctccaacaggaccagtagttggctggtactgaggaatctc
accccacaaattgacggttcgactctgcggaccctgtgcatgcagcacggccccctgatc
acattccacctcaacctgacccaggggaacgctgtggtgcgatacagctccaaagatgaa
tccgcaaaggcccaaaagtctctgcacatgtgtgtacttggaaacaccaccattctggca
gagtttgctggggaggaggaggtgaaccgcttctttgcacaaggccagtcactgggggca
aacaccactagctggcaggccaaccagggatccaatcagaaccggatgggagcagcgcag
tcccactctatcggccaatggagcggcggcggcggaggcaagaccagcggaggagacctt
ctttggggtggagtgccccagtactccagcctgtggggccctccgagcggagaagatgcc
cgtgtgattgggagccccacgccgatcaacaccctgctgcccggagatctgctgagtgga
gagtccatgtag
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integrated database retrieval system
