Takifugu flavidus (sansaifugu): 130526816
Help
Entry
130526816 CDS
T09160
Name
(RefSeq) LOW QUALITY PROTEIN: RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130526816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfs03009
]
130526816
Ribosome biogenesis [BR:
tfs03009
]
Eukaryotic type
Pre-60S particles
RNases
130526816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DNA_pol_A_exo1
DEDDh_C
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
130526816
NCBI-ProteinID:
XP_056890754
LinkDB
All DBs
Position
6:complement(5861848..5867426)
Genome browser
AA seq
815 aa
AA seq
DB search
MITNTRNCALTMDPAASQSMTYSGNKRKNITPSEHEQAKRRKTLQESEEKLETGRESRSA
RICAMPDLFPQPITLNELVELLHYAALGKTGGNKKPSWCRLFHQRKIKALNVVIVEGLSQ
SDFYRHYLSLRHLRSRYTTRVTFTPSPTDIASAIFSSELPKSDSLFRPQRHGENSQLDKA
LRIHPVITAYGTQRRGLTAYVLTQEEMIKKHFPVKGVPGFEEFACTDSVACVTDSSPLFG
LDCEMCLTGQGYELTRVSLVDSDGKCLLDQLVKPQNHILNYLTCFSGITAAMLRPVRTTL
RDVQAQLRTLLPSDAVLVGHSINNDLMALKMIHQHVIDTSLLYRRQCGQKFKLKVLTEVV
LNKKIQTEDRKGHNPTEDAVAALELAHYFIRMGPCRVVELHLEELWGYKVEEASPDCASS
PPLSRRFADVLQTHGRSVAFIGKRADVALSLSNQVWQNSDKQVLASFRSQTKCPFLSVIQ
LSSFSDHLKRRPPHQEVQDQRSCTILRNMCVVFAGPFPAGFSQREVKRLFCCCGPVHKIR
MLHTAVRLHAEIQFELLEGAALALATLNGLNVQGQNIKVQRPVDESLLDLELTLDALACD
HLNSSHLYAVKLTSTMAGGXTASAEVSAVDASANTPPPARVNGAQFQHDNASKTELSEET
VRETFSHFGPVERVLLPTNPGCRARRHAHIQFNSPADKRRALSSSEELRKQNYLVSSTLT
PTHLTSWVAMTMLRANTVDSHQIAAEGEESHTCIGSQDQDSITMLKLDRRLRRLFRSLPD
GTLSVVILGGHHSAHSPGLCLLEVKQDPQGETGSS
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgatcactaacaccagaaactgcgcattgactatggatcctgcagcatcacaatcaatg
acatacagcggcaataaaagaaagaacatcaccccctcagaacatgagcaggccaagaga
aggaaaactctgcaggaaagtgaggagaaactggagactggacgagagtcccgctcagca
aggatctgtgcgatgcctgatctctttccacaaccaattacactgaatgagctggtggag
ctgcttcattatgctgcgctggggaaaacaggtggcaataaaaagcccagctggtgccga
ctcttccatcagaggaagattaaagctttgaacgtggtgatcgtggagggtttgagccag
agtgacttttacagacactacctcagtctgcgacacctaaggagcagatacaccactagg
gtcacctttacgccatcacctacagacatagcatcggccatcttcagcagtgagctccct
aagtcagactccctgttccgcccgcagagacatggtgaaaacagtcagctggacaaagct
ctgaggattcaccctgtcatcactgcgtacgggacccagaggagaggactaacagcatat
gttctcactcaggaggagatgatcaagaaacatttccctgttaaaggagttcctggcttc
gaagagtttgcgtgcacagacagtgttgcctgtgtgacagacagcagcccactgtttgga
cttgactgtgagatgtgtttaacaggacagggatatgagttgactcgtgtttccctggtg
gacagcgatgggaagtgtttactggatcagctggtgaaacctcagaaccatattctcaac
tacctcacctgcttctctggtataactgcggccatgctgcggcccgtcaggaccaccctg
agggacgttcaggcgcagctccggacactgttgccgagtgatgcggtgttggtcggccat
tccattaacaatgacctgatggctttgaaaatgatccaccagcatgtgatcgacacctca
ctgctgtacaggagacagtgtggacagaagtttaaactcaaggttctgactgaggtggtg
ctgaacaagaaaatacaaacagaagataggaagggtcataatccaactgaggatgctgtg
gctgccttggagctggctcactactttattagaatgggaccttgcagggttgtggagctt
cacctggaggaactttggggttataaagtagaggaagcgtcccctgactgtgcttcatct
cccccactcagtcgcaggtttgcggacgtactgcaaacacacggccgctctgtagccttt
atagggaagcgggctgacgtcgccttgagtctgtccaatcaggtgtggcagaactctgac
aaacaggtgctggcctcattcaggagtcaaaccaagtgtcccttcctctctgtgatccag
ctttcatccttttctgaccatctgaagaggcgtccccctcaccaggaggtccaggaccag
aggtcgtgcacaatccttcgcaacatgtgtgtggtgttcgcggggccgtttcctgctggt
ttctcccagagagaagtgaagcggctgttctgttgctgtggaccggttcacaagatcaga
atgctgcacacggccgtgaggcttcatgcagagatccagtttgagctgctggagggagct
gcgctggccctggcaactctgaatggcctaaacgtgcagggacagaacatcaaggtacag
aggcctgttgacgagtcactgctggacctggagctgactctggatgctctggcatgtgat
catctcaacagcagtcatctctatgctgttaaactgacctccaccatggccggcggcntc
accgcttctgccgaggtcagcgccgtagacgcctcagcaaacacgcccccccccgctcga
gttaatggtgctcagttccaacacgacaacgcctcaaagacagaactgtctgaggagacg
gtcagagaaaccttttctcacttcggcccggtggaaagagttctcctgcccaccaaccct
ggatgccgcgccaggcggcacgcacacatccagttcaatagtcccgcggacaaacgcaga
gctctcagctcctctgaggaactccgcaagcaaaactacctcgtcagttcaaccctgact
ccaacacacttaacttcgtgggttgccatgacaatgctcagagccaacactgtggattct
catcagatagcggcagaaggcgaggagagccacacgtgcattggatctcaggaccaggac
agcatcacgatgctgaagctggaccgtcgccttcggcggctcttccgatccctgccagac
gggaccctgtctgtggtcatcctgggtggacaccacagtgctcacagtcctggtttgtgc
ctgctggaggtaaaacaagacccccaaggagagacaggaagcagctga
DBGET
integrated database retrieval system
