Takifugu flavidus (sansaifugu): 130527004
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Entry
130527004 CDS
T09160
Symbol
trim2a
Name
(RefSeq) tripartite motif-containing protein 2
KO
K11997
tripartite motif-containing protein 2/3
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130527004 (trim2a)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130527004 (trim2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
DUF5128
Filamin
zf-B_box
SGL
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
TEN_NHL
Invasin_D3
RING_XB3-XBAT31
zf-C3HC4_4
Beta-prop_IFT122_1st
CTXL_M
zf-ANAPC11
Mala_s_1-like
Prok-RING_4
PAF-AH_p_II
FPP
zf-RING_11
PI3K_P85_iSH2
HAUS5
DUF5446
DUF7605
Motif
Other DBs
NCBI-GeneID:
130527004
NCBI-ProteinID:
XP_056891005
LinkDB
All DBs
Position
6:4889108..4902396
Genome browser
AA seq
743 aa
AA seq
DB search
MASEGATLPSPVVRQIDKQFLICSICLDRYENPKVLPCLHTFCERCLQNYIPAHSLTLSC
PVCRQTSILPEKGVAALQNNFFITNLMDVLQRTPGSFSQEAAALNSVTNVAAGQLLSCPN
HGGNVMEFYCPHCETAMCQECTNGEHGEHPTVPLKDVVEQHKASLQEQLGAVKQRLPEIN
SALQMVSEILQQLTSQKSSIENDIHATFDELQKTLNVRKSVLLMELEVSYGLKQKVLQAQ
LDTLLQGQEGIRSTCDFTEQALSRGTDAEVLLVKKQMSDRLIGLATQDLPLQPGENDQLD
FLVETDGLKKSIHNLGTVVTTNAVASETVATGEGLRHCVMGVPTSITITTKDKDSELCKM
GNAIITAELSSSDGSKGEGEILDNKNGTYEYLFTAPKEGTFNLSLRLYEQHIKGSPFKIK
VIKSIDFMATTDGVKKRLKSPSSSHIKQKAIKRPASMYSIGRRKENPIEDDLIFRIGTKG
RNKGEFTNLQGVTASQGKVLIADSNNQCVQVFSNDGQFRMRFGIRGRTPGQLQRPTGVAV
HPNGDIIIADYDNKWVSIFSSEGKFKNKIGSGKLMGPKGVSVDRNGHIIVVDNKSCCVFI
FQLNGKLVTKFGNRGNGDRQFAGPHFAAINSNNEIIVTDFHNHSVKVFNTDGEFLLKFGS
NGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLAL
TSDGHVVVADSGNHCFKIYRYLQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaaggcgccactctccccagccctgtggtacgccagatcgacaaacagttc
ctgatctgcagcatatgtctggaccgctacgagaaccccaaagtgctgccctgcctgcac
accttttgtgagaggtgcctgcagaattacatcccggcccacagcctcacactttcctgc
cccgtgtgccgccagacctcgatcctgccggagaagggtgtggcggccttgcagaataac
ttcttcatcaccaacctgatggacgtgcttcagcggacaccgggcagcttcagccaggag
gccgccgctctcaacagtgtcaccaatgtggctgcaggccagctgctctcctgccccaac
catggaggcaacgtcatggagttttactgtccccattgtgagacggccatgtgtcaggag
tgtacgaacggtgagcacggagaacacccgactgtgcctctgaaggacgtagtggaacaa
cacaaggcctcactacaggagcagctaggtgctgtcaagcagaggttgccggagatcaac
tcggccctgcagatggtgtcggagatcctgcagcagctgaccagtcagaagagctccatc
gagaacgacatccatgccaccttcgatgagctgcagaaaactctgaatgtgcgcaagagc
gttttactcatggagctggaggtcagctacgggctcaaacagaaggtactccaggcccag
ctggacaccctgctgcagggacaggagggcatcagaagcacctgtgactttactgagcag
gcgctgagccgtggcaccgacgccgaggtgctgctggtgaagaagcagatgagcgatcgc
ctgatcgggctcgccacccaggacctccctctgcagcccggagagaacgaccagctggac
ttcctcgtggagacggacggactgaagaagtccatccacaacctgggcaccgttgtgacg
accaacgccgtggcctccgagactgtggccactggcgaggggctacggcactgcgtgatg
ggcgtgcccacttcgatcaccataacgaccaaggacaaagacagtgagctgtgcaagatg
ggtaacgccatcatcacagctgagctctcctcatctgatggcagcaaaggcgaaggggag
atactggacaataaaaacggcacctatgaatacctgttcacggcccccaaagaggggact
ttcaacttgtctctgcgtctttatgagcaacatatcaaaggaagcccctttaagataaag
gtcattaagtctatagatttcatggcaacaactgatggcgtaaagaagaggctgaagtct
cctagcagcagtcacatcaagcagaaggccatcaagaggccagccagcatgtacagcatc
gggaggaggaaagaaaaccccatcgaggacgacctcatcttcagaataggcaccaaagga
aggaacaaaggagagttcacaaaccttcagggagtaactgcctctcagggaaaggtgcta
atagctgacagcaataaccagtgtgtccaggttttctcaaacgatggccagtttagaatg
cgatttggcatccggggacggactccaggtcagctgcagaggccgacgggcgtggccgtc
caccccaacggtgacatcataatcgccgattatgacaacaaatgggtcagcatcttttcg
agtgagggcaagtttaagaataagatcggctccgggaagctgatgggccctaaaggcgtc
tctgtggacaggaacggtcacatcatcgtggtggacaacaaatcctgctgcgtctttatc
ttccagctcaacggcaagctggtcaccaagtttggtaaccgcggcaacggcgacaggcag
tttgcaggtccacattttgccgccattaatagcaacaatgaaatcatcgtgacagatttc
cacaaccattcagtaaaggtgttcaacacagatggagaattcttgctgaagttcggctcg
aacggcgagggtaacggccagttcaacgcccccacgggggtggcggtggatgtgaatgga
aacatcatagtagcagattggggcaacagcaggatacaggtgtttgatggcagtggctcg
ttcctgtcgtacatcaacacatcagcagacccgctgtacggcccacaggggctggcgctc
acctcggacggacacgtcgtggtggccgattctggcaaccactgcttcaaaatctatcgc
tacctgcagtag
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