Takifugu flavidus (sansaifugu): 130527052
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Entry
130527052 CDS
T09160
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130527052
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130527052
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130527052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130527052
NCBI-ProteinID:
XP_056891119
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All DBs
Position
6:complement(1122632..1129293)
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AA seq
636 aa
AA seq
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MRGGSYGDRDRDRGRDRPRFGAIGGRSGPTQTKFGNPGERLRKKRWNLDELPKFEKNFYT
EHPEVQRMSQYEMEEFRRKKEITIRGSGCPKAILAFHQAQFPQYVIDVLVQQNFKEPTAI
QSQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPYPERGDGPIVLVLAPTRELA
QQVQQVAFDYGKCSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKEYIQI
NIGALELSANHNILQIVDVCLENEKDEKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRR
MRRDGWPAMCIHGDKSQPERDWVITEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLRQLVDSCRG
GGGGGGRMRYRGSSSNNPNLMYRDECDRRMRPGGGGGKDGRDARNSRDEDRPSSSYRDQS
RDHRNSYAAGSDQYQSYSSASGGYNSHSGGGGQEQPRQAHSQFSQALLPQLPAGLQPLMA
QQFAPQQPPLMGFVGQTPYSFASPPPPPPGLQPPRK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaggctcatacggggacagagacagggaccgtggacgggacagacctcgcttt
ggggccatcggtggtcgcagtggacccacacaaacgaagtttgggaatccgggcgaacgt
ctccgtaaaaaaagatggaacctggatgagctgccaaagtttgagaagaacttctacaca
gagcaccctgaggtccaacgcatgagccagtatgagatggaagagtttcggagaaagaag
gagatcaccataagaggctctgggtgtccaaaggcgattctggctttccaccaggcacag
tttcctcagtatgtgatagatgtgttggtgcagcagaatttcaaagagccaacagcaatc
cagtcccagggcttccctgtggccctgagcggtaaggacatggtggggattgcccagact
ggatccgggaaaacattagcttatcttcttcctgctatcgtgcatatcaaccaccagccg
tacccggagaggggagatgggccgattgttctggtgcttgcaccaactagagagctggct
cagcaagtccaacaggttgcattcgactacgggaagtgttcccgtatcaaaagcacctgt
gtctatggtggagcacctaaagggcctcagattcgagaccttgagaggggagttgagatc
tgtatcgccacacctggtcgcctcattgacttcttagaatgcgggaaaacgaacctgcgg
cgatgcacctatctcgttctggatgaagctgatcgtatgctggacatgggctttgaaccc
cagattcgcaagatagttgaacaaatcaggcctgacagacagaccctgatgtggagtgca
acctggccaaaagaggtacggcagctggctgaggacttcctgaaggaatacatccagatt
aatattggtgctctggagctcagcgccaaccacaacatcctgcaaattgttgacgtctgc
ctggaaaacgaaaaggacgagaagcttattcagctgatggaggagatcatggctgagaaa
gagaacaaaaccatcatctttgtggagaccaagaagcgttgtgatgacctgacccggagg
atgaggcgtgacggctggcctgccatgtgtatccatggagacaaaagccagccagagaga
gactgggtaatcacagaatttcgcagtggtaaagctcctattctgattgctaccgatgtg
gcttcccgtggtctggatgttgaagatgtcaagttcgtcatcaactatgattatcccaac
tcctccgaggattacgtgcaccgtatcggccgcacggcccgcagtaccaacaagggcacc
gcttacaccttcttcacgccgggcaacttgcgtcaggctcgagacctcgtcagggtgtta
gaagaggcccggcaggccatcaaccccaaactgcgtcagctggtggactcctgccgaggg
ggaggaggtggcggtggcaggatgcgttaccgcgggagcagctccaacaaccccaacctc
atgtaccgcgacgagtgtgaccgccgcatgcgccctgggggcggcggcggcaaggacggc
cgcgatgctcgcaacagccgcgacgaagaccgcccctcttcctcctacagagaccaaagc
cgggatcacagaaatagctacgccgccggctcagaccagtatcagagctacagcagcgcc
agcgggggctacaactcgcacagtgggggaggggggcaggagcaaccccgacaggctcac
agccagttcagccaggctctgctccctcagctccctgctgggctgcagcctctcatggct
cagcagtttgcccctcagcagccgcccctcatggggtttgtggggcaaacaccttattct
tttgcctccccaccccctcctcctccaggccttcagcctccaaggaaatag
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