Takifugu flavidus (sansaifugu): 130527070
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Entry
130527070 CDS
T09160
Symbol
cacna1ab
Name
(RefSeq) calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04010
MAPK signaling pathway
tfs04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130527070 (cacna1ab)
04020 Calcium signaling pathway
130527070 (cacna1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130527070 (cacna1ab)
Ion channels [BR:
tfs04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130527070 (cacna1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
130527070
NCBI-ProteinID:
XP_056891150
LinkDB
All DBs
Position
6:complement(7230667..7315802)
Genome browser
AA seq
2548 aa
AA seq
DB search
MLSPLYQELGGSVVCPHTSSSQGIRRPPRCHPPPISGSSVGPNPTYYHTVYDVQVDQYAD
VPFPVGGGGYGARFGRKPLSLVTNDSTVPPIRRRGGLVDHRDVILAHQAHKLHNTPQARR
KQWEMARFGDELPNRYGGGGGGGGGGAGGQGGPGRGGSRQGGAPGAQRMYKQSMAQRART
MALYNPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITDFTPFEWMILTTIIANCIVLALE
QHLPDGDKTPLSERLEDTEPYFIAIFCFESGIKILALGFALHKGSYLRNGWNVMDFVVVL
TGILSTAGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAIL
MFAIIGLEFYMGKFHKTCYNKVTGEVVDELPCGTLPPSRLCPNGTECRGDWLGPNHGITQ
FDNILFAVLTVFQCITMEGWTEMLYYSNDVEGSTWNWMYYIPLIIIGSFFMLNLVLGVLS
GEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDGTGNFDGSRRNM
KTKNNKTELLNPEEGEDNLGDALGFARSSIKSGKEGSNYSKKERRLRFLIRKMVKTQAFY
WTVLCLVGLNTICVAAVHYNQPQLLSDFLFYAEFIFLGLFMSEMLIKMYGLGIQPYFHSS
FNCFDCVVILGSIFEVVWATIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNS
MKSIISLLFLLFLFIVVFALLGMQLFGGQFNFELGTPPTNFDTFAAAIMTVFQILTGEDW
NMVMYNGIESQGGVNDKGMIFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEE
QEEAANQKTALQKAKEVAEVSPLSAANLSIAAKEQQKNHIKGNKSVWEQRTSEIRRQNLM
TSREALYNELEQDDWKVGDEGGEVSYPRKGRGNMKTHLDRPLVVNPQDNRNNNTNRTQPG
ELPLEEEYRRQDVDHYQRAGHSHHHHRHHHHHHHHHQRASGADNAGTRQPAETRIQHGIS
CTSLSNVEGQQAPERHSHRGHCHRHRNRESREARSISPHHSDGAEGTNEPRRARQHCRAA
KEGEEGRRHRSKRTEGEGEKGTEGEGRRSRRHCHSSQERGRGHRSRKEHHRANLSTTRPI
QQYNEDLDNLRNNSKLASAQVHPYTLPPDHPDHVNNLLNCCDTDTHTLLHSMDSLILTSM
AKPDYTAIDMPPVYPYPSTNAILQVNKNANTDQKKSEEKKEEEDEDGDENGPKPMPPYSS
CFILSTTNPFRKCCHYILTLKYFEFGILSVIAMSSIALAAEDPVWPDSPRNNVLRYFDYI
FTGVFTFEMLIKMVVLGLFLHQGSYFRDLWNILDFIVVSGALVAFAFTGSSKGKDISTIK
SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRF
FFCTDESKEFERDCRGEYLVYERDEVKARKREWKKYDFHYNNVAWALLTLFTVSTGEGWP
QVLKHSVDSTYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMME
DYSLEKNERACIDFVINARPLTRHMPKNKLSFQYRMWQFVVSPPFEYSIMALIALNTIVL
MMKFNDASQTYSDVLKYLNIVFTTFFFMESILKIIAFGPLNYFRDAWNIFDFVSVLGSIT
DILVTEVWNNFINLSFLRLFRAARLLKLLRQGETIRILLWTFVQSFKALPYVCLLIAMLF
FIYAIIGMQLFGNLALDEDRECAINEHNNFRTFFMALMLLFRSATGEAWHEIMLACLGGK
ECDPASGNTGKECGSTFAYTYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHL
DEYVRIWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLPVADDN
TVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKSLDQLVTPHKAA
TDLTVGKIYAAMMIMEYYRQSKSKKLQAMREEQNRTPLMFQRMEPPPEGGGTEGQAGQGL
NGLPNTQPDNLNNIPPEGGMSESQSWVTAKAQEMFQKTGNWSPDRPYTDDLHDNCHNPQT
VEMREMGRDGYSDTEPYHPVDGHGRTLSMPRLSADNQRAHAVSRRRHRPRGSNLSTITDT
SPMRRSTSSLVHGRSGRGVRLDDYSLERVVSEEGRHGGGRRHRDRSHRASQRSLTRYTDA
DTDVSSIGLGTDLSTTTQSGDAPPKDRERDRGRTKDRRHHHHHHHHHSSMDKERYGPDRH
DYSHRHSHDRHWSRSPSEGPDGRGHRQGSSSVSGSPVPSTSGTSTPRRGRRQLPQTPAVP
RPHVTYSPAVRKPSYGPPGPGRLRSPSPRHFSPPDHDRGYHHRPPSRQVSPHHGGSSSRH
GSPRSPRHQSPRSPLHGSPRSPHRARWSGPPPGDSLEGDGPFYERDYEYERHHEPPAYEQ
SLSHGNPHPHGNPHPHPRSPRTARHGPPLPPHPHPRRVPNGYRSSSPSPHRRGPPGAPPH
PHHRSTHARGPRKGLHEPYSETDEDDWC
NT seq
7647 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcccccctctaccaggagcttggtggctcggtggtgtgtccccacacctcctcc
tctcagggcatccgcaggccgccacgctgccacccaccccccatcagtggaagcagcgtg
ggcccaaaccctacctactatcacactgtctatgacgtccaggtcgaccagtacgctgat
gtgccctttcctgttggaggaggcggctatggtgcgcgctttggccggaagcccttgtct
ctggttactaatgactctactgtccccccgatccgccggagaggaggactggtggaccac
agggatgtcatcctggctcaccaggcacacaagttgcataacacaccacaggccaggagg
aaacaatgggaaatggcgcgctttggagacgagctacccaacaggtatggaggtggagga
ggaggtggcggtgggggtgccggtggacaaggggggcccggccgtggtggcagcaggcaa
gggggggctccaggagcacagcggatgtacaagcagtcgatggcccaaagagcccggacc
atggccctgtacaaccccataccggtccggcagaactgcctgacagtcaaccgctccctg
ttcctcttcagcgaggacaacgtggtgaggaagtatgccaagaagatcaccgacttcact
ccctttgaatggatgatcctcaccaccatcattgctaactgcattgtcctggctctggaa
cagcatctccccgatggagacaagacgcctctgtctgaaagactggaggacacggagcct
tacttcattgccatcttctgttttgagtctgggatcaagatcctggccctgggtttcgcc
ttacataagggctcctacttgaggaatggctggaatgtcatggactttgtagttgtgctc
actggtattttgtctacggcgggatctcagtttgacctgaggacgcttcgagccgtcaga
gtgctccggccactcaaactggtgtccgggattcccagcctacaggtggtgctgaagtct
attatgaaggccatgattcccctgctgcagattggcctgctgttgttcgtggccatcctc
atgtttgccatcattggactggagttctacatggggaagttccacaaaacctgctacaac
aaagtcacaggggaggtcgtggacgagttaccgtgtggcacattgcccccgtccaggtta
tgtcccaatggtacggagtgcagaggtgactggcttggaccaaaccacggcatcacccaa
ttcgacaacatcctatttgctgtactcaccgtcttccagtgcatcacgatggagggatgg
acagaaatgctttactacagtaatgatgtggagggcagcacctggaactggatgtactac
atcccactcatcatcattggctccttctttatgctcaacctggtgctgggtgtcctctca
ggtgaatttgccaaagagagagagcgagtggagaacaggagcgagttcctcaagctccgg
cggcagcagcagatcgagagggagcttaatggatacctggagtggatctgcaaagcagaa
gaagtgatcctggccgaggatgacggcacaggcaactttgatggttcaagacggaacatg
aaaaccaaaaacaacaagactgagctgctgaacccagaggaaggagaggacaacctggga
gacgccctcggttttgcccgatccagcataaaaagcgggaaagagggctctaattatagt
aagaaggagcgacggctacgattcttaatccggaagatggtgaagactcaggccttctat
tggacggtgctctgcctggtgggcctcaacaccatttgtgtggccgcagtgcactacaat
cagccccagttgctgtctgacttcctcttctatgcagagtttatcttcctcggcttgttc
atgtccgagatgctgatcaagatgtatggactgggcatccagccctacttccactcctca
ttcaactgttttgactgtgtggtcattctgggcagtatcttcgaggtggtgtgggccacc
atcaaaccgggaacgtcctttgggatcagcgttttacgagctctgcgacttctccgcatc
ttcaaagtcaccaagtactgggctcctctaagaaacctggtggtttccctcctaaactcc
atgaagtctatcatcagtttgctcttcctcctcttcctcttcatcgtggtatttgcattg
ttggggatgcagctgtttggtggacaatttaactttgaacttgggacccctcccactaat
ttcgacactttcgccgcagcaatcatgacagtgtttcagattctgacgggagaagactgg
aacatggtgatgtataatggcattgagtcccaaggaggagtgaatgacaaagggatgatc
ttctccatcttcttcattgtcctcacactttttggcaactatacactgctcaacgtcttc
ttggccatcgctgttgacaatctggccaatgcccaggaactcacaaaggatgaggaggaa
caggaggaggcagccaatcaaaagacagccctacagaaagcaaaggaagtggctgaggtc
agccctctatcagcagccaacctatccattgcggcgaaggagcaacagaagaaccacatc
aagggcaacaagtccgtgtgggagcagagaaccagtgagatccgccgacaaaacctgatg
acgagccgcgaggcgctctacaacgagctcgagcaagatgactggaaggtgggagacgaa
ggaggggaggtttcctacccacggaaaggacgcggcaacatgaagacccacttggatcgg
ccgttagtggtaaaccctcaggacaaccgcaacaacaacactaacagaacacaaccgggt
gagctgcctctggaggaggagtaccgccgccaggatgtggaccactaccaaagagccggg
cactctcaccaccaccaccgccaccatcaccaccaccatcaccatcatcagagagccagt
ggggcagacaatgcagggaccaggcagccggcagaaacccgcatacagcatggcatcagc
tgcacatccctgagcaatgtggagggtcaacaggcgccagagaggcacagccacaggggc
cactgccaccgtcacaggaaccgggagagcagagaggcccgcagcatttccccgcaccat
agtgatggcgcggagggcaccaacgagccgaggagggcaaggcagcactgcagggcagcc
aaggaaggggaggaaggcaggagacataggtccaagcgaacagaaggagagggagagaaa
ggcacggagggggaaggaaggagaagcagacggcattgccacagcagccaggagaggggc
agagggcaccgaagtagaaaggagcaccacagggccaacctctccacgactcgacccata
cagcagtacaacgaagacctggacaacctgcgcaacaacagcaagttggccagcgcccag
gtgcacccatacacgctgcctccggaccaccctgaccatgtcaacaacctgctgaactgc
tgcgacactgacacccacacgctgttacacagcatggacagcctcatcctgaccagcatg
gccaaacctgattacactgccatcgacatgccgccggtgtacccctacccatccaccaac
gccatcttacaagtaaataaaaatgccaacactgatcagaagaagagcgaagaaaagaaa
gaagaggaagatgaggatggtgatgagaatggccccaaacccatgcctccgtacagctcc
tgctttattttatccaccaccaacccgttccggaagtgctgtcactacatcctgactctg
aagtactttgagttcggcatcctatctgttatcgccatgagcagcatcgccctcgccgcc
gaggacccagtctggccagactcaccacggaataatgtgctgcgttattttgactacatt
ttcacaggcgtcttcacatttgaaatgctgatcaagatggtggtgctgggcttgtttctc
catcaaggctcttacttccgagacttgtggaacattctggactttatagtggttagtggt
gctctggtggccttcgccttcacggggagcagcaaaggcaaagacatcagcaccatcaaa
tccctccgcgtgctaagggtgctgcgtccgcttaagaccatcaagcgacttcccaaacta
aaggctgtgtttgactgtgtggtcaattctctgaagaacgtgttgaacatcttgatcgtc
tacatgctctttatgttcatcttcgccgtggtggctgtacagctgttcaagggccgtttt
ttcttttgcacagatgaatcaaaggagtttgagcgcgactgcaggggcgagtacttggtg
tatgagagagatgaggttaaagctcggaagcgggagtggaagaagtacgatttccactac
aacaacgtggcttgggcccttctcaccctcttcactgtctccactggagaggggtggcca
caggtgctaaagcactcagtggactccacttatgagaatcagggccccagcccgggatac
aggatggaaatgtccattttttacgtggtgtacttcgttgtcttccccttcttcttcgtg
aacatctttgtcgctctcatcatcatcaccttccaggaacagggcgataaaatgatggag
gactatagcttagagaagaatgagagagcttgtatagattttgtcattaacgctcgacct
ctgacgcgccacatgccaaagaataaactgagtttccagtatcgcatgtggcagtttgtg
gtgtccccgcccttcgagtacagcatcatggctctgattgcactcaacaccatcgtactg
atgatgaagtttaatgatgcatcgcaaacatacagtgacgtcctgaagtacctcaacatc
gtatttaccaccttcttcttcatggaatcgattctcaagatcatcgctttcggccctctg
aattacttcagagatgcctggaatatttttgattttgtctctgtcctcggaagcatcact
gatattttagtgacagaagtttggaataatttcatcaacttgagctttctgaggctcttc
agagcagctcgtcttctcaagctgctgagacagggagagaccatccgcatcctgttatgg
actttcgtccaatccttcaaggcgctgccatacgtgtgcctactcatcgctatgctcttc
tttatctacgccatcattggcatgcagttgtttgggaatctggcactagacgaagaccga
gagtgtgccattaatgagcacaacaacttcaggaccttctttatggccttgatgctgctc
ttcaggagtgctacgggtgaagcatggcatgaaatcatgttggcctgtctgggagggaag
gagtgcgacccagcctctgggaacacaggaaaagagtgtggcagcacttttgcctacacc
tactttgtctccttcatcttcctctgctccttcctgatgttgaatctctttgtggctgtc
atcatggacaattttgagtacctgaccagagactcttcaattcttgggccgcatcacctg
gacgagtacgtaagaatatgggccgagtacgaccctgcagcctgcgggcgcatacattat
aaggatatgtacagtttattgcgagttatctcccctcctctgggccttggcaagaaatgc
ccacatagggtggcctgcaagaggctgctccgtatggacctgccggttgctgatgacaac
acggtgcactttaactcgaccctcatggctctgatcaggacagctcttgacataaagatt
gccaagggcggtgcagacaaacaccagatggatgcagagttgaggaaggagatgatggct
atttggcccaatctatcgcagaagtccctggaccagctggtgactccacacaaggcagcc
acagacttgacagtcggcaaaatctacgccgccatgatgatcatggaatactaccggcag
agcaagtcgaaaaagctgcaggccatgcgggaagaacagaaccgaacgccattaatgttt
cagcgcatggagccgccccctgagggagggggcactgaaggccaggcaggtcaaggcctg
aacggcctccctaacacccagccagacaacctcaacaacatacctcctgagggtggaatg
tctgagagccagtcgtgggtaacggccaaagcccaggaaatgttccagaagacgggcaac
tggagcccagacagaccctacaccgatgatctccatgacaactgtcacaacccacagacg
gtagagatgagggagatggggcgggacgggtactccgacactgagccctatcacccagtg
gatgggcatgggcggaccctctccatgccccgcctctctgcagacaaccaaagagctcat
gctgtttcgcggagaagacacaggccacgcggaagtaacctcagtaccataacggacacc
agtccgatgcgtcgctccacctccagcctggtccacgggcgctcaggccgtggagtcagg
ttggacgactactctttggagagggtggtgtctgaggagggtagacacggaggaggacga
agacaccgggacaggagccaccgggcctctcagcgctcactgaccagatacaccgacgca
gacacagacgtctcctcgataggcctgggcacagacctcagcaccaccacacagtcaggt
gacgctccaccgaaggatcgcgaacgggaccgtggccggaccaaggaccgtcgccaccac
catcatcaccaccaccaccacagctccatggacaaggaacgttacggtccagatcgtcat
gactacagccacaggcattcccatgaccgccactggtcccgctcccccagcgagggaccc
gatggacgtggacaccggcagggcagtagttcagtgagcggcagcccggtcccctccact
tcggggaccagcactccacggagaggccgtcgccagctaccccagacccctgccgtcccg
cgtccacatgtcacttactcccctgctgtccgaaagcccagctacggtcccccggggccg
ggtcgactccgctcgccctcccccagacacttctccccaccagaccacgacaggggctac
caccaccgccccccatcacgtcaagtttctccgcatcatggggggtcctcatcccggcac
ggttccccgcgctctccgcggcaccaatccccgcgttcgcctctccacggttcaccaagg
tcccctcatcgagcccgttggagcggccctccgcctggggatagcctggagggggatgga
cccttctatgagcgtgactatgagtatgagcggcatcatgagcctcctgcctatgagcaa
agcctctctcatggtaacccgcatccacatgggaacccacatccacacccacgttcacca
aggactgcccgccacgggccccctctgcctcctcacccacatccccgcagggtgcccaat
ggctaccgctcatcgtcaccttctcctcatcgccggggacctccaggagcaccgccccac
cctcaccaccgctcaacccatgccagaggccctcgcaaaggcctgcatgaaccttatagc
gagacggatgaggatgactggtgctag
DBGET
integrated database retrieval system
