Takifugu flavidus (sansaifugu): 130527084
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Entry
130527084 CDS
T09160
Symbol
clockb
Name
(RefSeq) clock circadian regulator b isoform X1
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130527084 (clockb)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130527084 (clockb)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
130527084 (clockb)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130527084 (clockb)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
130527084 (clockb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
CFSR
Motif
Other DBs
NCBI-GeneID:
130527084
NCBI-ProteinID:
XP_056891194
LinkDB
All DBs
Position
6:16010202..16024234
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AA seq
859 aa
AA seq
DB search
MTSSIRDDCSIFDGLMEEDEKDKAKRVSRNKSEKKRRDQFNVLIKELGTMLPGNTRKMDK
STILQKSIDFLCKHKEIAAQSESSEIRQDWKPPFLSNEEFTQLMLEALDGFFIAIMTDGN
ILYVSESITSLLEHLPTDLVDQNLLNFLPIGEHSDVYKALSTHPSDPESLNTDFMKTKNH
MEFCCHMLRGAIDPKESPVYEYVRFIGNFKSLNNVPNITRNGLAGVLQRSLQPAFDDQVC
FVATVRLAKPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGY
DYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIV
CTHTVVSYAEVRAEQRRELGIEEANPDISADKSQDSGSESQLNTSSLKEALERFDHSRTP
STSSRSSRKSSSHVSDNTCTSTASKLHMDTATPPRQSLASTMEMTPQRRSSISSQSMSSQ
TTNQSVTPGMMTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQLQPNVQPVMEFSAQVNAMQHLKEQLEQRTRMIQANIQRQQEELRHIQ
EQLQRVQGQGIQMLLQQQSGATNVQLPQPQRQTQPPQQAQPQTQASVSAPLYNTMMISQP
GQPNVLQISTTLPQNNAQQGTAVATFTQDRQIRFPAGQQLVTKLVTAPMACGAVMVPTSM
FMGQVVTAYNPFSGQQQGGQTQTLTLQAAQPPPGQPDGQTQTAVVAQSGQPGQQGQQGQF
LQGTRLLHGNQSTQLILQTAFPLQQQGAFAQATHQPPPPPPPPPQPHHQRHQQQLKPQPQ
KQQKAPSSHRTDSISSQPQ
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgacatccagcatcagggacgattgtagcatctttgatggattaatggaagaagatgaa
aaggacaaagccaaacgcgtgtcccgcaacaagtctgagaagaaacggagagaccagttc
aatgtcctcatcaaggagctcggcacgatgttgccaggcaacaccaggaaaatggacaag
tccaccatactgcagaaaagcattgacttcctgtgtaaacataaagagattgctgctcag
tcggagtccagtgagatccggcaggactggaaacctccatttctgagcaacgaggagttc
acccagctaatgctggaggctctggatggattctttatagcaataatgacggatgggaac
atcctctatgtgtccgagagcatcacgtctctgctcgagcacctgccgactgatttggtg
gaccagaatctattaaacttcttgccaatcggggaacactctgatgtgtacaaggctctg
tccacacaccccagtgacccagagagccttaacactgatttcatgaagactaagaaccac
atggagttctgctgccatatgctgcgcggggccatcgaccccaaagaatcacctgtctat
gaatatgttcgattcattggcaacttcaagtcactcaataatgttccaaacataacgagg
aatggtttagcaggggtgttgcagcgctctctacaacctgcgtttgatgaccaagtgtgc
ttcgtcgccacggtgcggctcgccaagcctcagtttattaaggaaatgtgcacagtagag
gaacctaatgaagaattcacctccagacacagcctggagtggaagtttcttttcctcgac
caccgagctccaccaatcataggctacttacctttcgaggtcctgggaacatcagggtat
gactattaccatgtggacgacctagagacactggcaaagtgtcacgaacacttgatgcag
tatggaaaagggaagtcttgttactaccgcttcttgaccaaaggtcaacagtggatctgg
cttcaaacgcactactacataacctaccaccagtggaactcgcgacccgagtttatcgtc
tgtacacacacggtggtcagctatgcagaagtgagggcagaacagcgcagggagttgggc
atcgaggaggccaacccagacatttctgcagataaaagccaggactctggttcagagtcc
cagctaaatacatctagcctcaaagaggctctggagagatttgaccacagccggacgccc
tccacttcctcaaggagttcccgtaaatcctcttcccatgtctctgacaacacttgcact
tcaacagcttccaagctacatatggacacagccacacctcctcgacagtcgctggcctcc
accatggagatgacgccccagcgccgctcctccatcagcagccagtctatgagctctcag
actacaaaccagagtgtgactccgggtatgatgacgcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcaacaacagcagcagcagcagcaacaacagcagcagcagcaa
caacagcagcagcaacaacagcagcagcaacagcagcaacaacaacaacaacagcagcaa
caacaacaacaacaacaacagcagcagcagcagcagcagcttcagccaaatgtacagcca
gtaatggagttctcagcacaggtaaatgcaatgcaacatctaaaggagcaactggagcag
aggaccaggatgatccaggccaacatccagaggcagcaggaagagttgaggcacattcaa
gagcagctgcagcgagtccagggacaaggaatccagatgttgctacaacagcaaagtggt
gcgacaaacgtgcagctcccacagccgcagcgtcagacgcagccgccacagcaggctcag
ccacagacgcaggcttctgtctcggctcccctctacaacactatgatgatttctcagcca
ggacagcccaacgtgctgcagatcagcaccactctgccacagaacaatgcacaacaaggc
accgccgtggccacgttcacacaggaccggcagatccggtttccagcaggtcagcagcta
gtgaccaagcttgtgacagctcccatggcctgtggagccgtcatggtgcctacatccatg
ttcatggggcaagtggtcactgcctacaacccctttagtggtcaacagcagggtggacag
acccagactctgactctgcaagcagcccaacctcctccgggtcaacctgacggccagacc
cagacggctgtggtggctcagagtggccagccggggcagcaggggcagcaggggcagttt
ctccagggaactcggcttctccacggtaaccagtccacccagctgattctccagactgct
tttccactccaacaacagggcgcctttgcccaggcaacgcaccaaccgccgccgccgccg
ccgccgccgccgcagcctcaccaccagcggcaccagcagcagctcaaacctcagccccag
aaacagcaaaaagcgccttcgtctcacaggaccgacagcatcagcagccagccgcagtga
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