Takifugu flavidus (sansaifugu): 130527103
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Entry
130527103 CDS
T09160
Symbol
htt
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin
KO
K04533
huntingtin
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130527103 (htt)
04131 Membrane trafficking [BR:
tfs04131
]
130527103 (htt)
03029 Mitochondrial biogenesis [BR:
tfs03029
]
130527103 (htt)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130527103 (htt)
Membrane trafficking [BR:
tfs04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130527103 (htt)
Mitochondrial biogenesis [BR:
tfs03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
130527103 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
130527103
NCBI-ProteinID:
XP_056891217
LinkDB
All DBs
Position
6:complement(895225..918402)
Genome browser
AA seq
3192 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPPTAEEIVQRQKKEQATTKKDRVSHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDSESDVRMVADECLNRIIKALMDSNLPRLQLELYKEIK
KNGASRSLRAALWRFAELAHLIRPQKCRPYLVNLLPCLTRITKRQEETIQETLAAAMPKI
MAALGHFANDGEIKMLLKSFVANLKSSSPTIRRTAASSAVSVCQHSRRTSYFYTWLLNVL
LGLLVPVDEEHHSHLILGVLLTLRYLMPLLQQQVNTISLKGSFGVMQKEADVQPAPEQLL
QVYELTLHYTQHWDHNVVTAALELLQQTLRTPPPELLHVLITAGSIQHASVFRQDIESRA
RSGSILELIAGGGSTCSPLLHRKHRGKMLSGEEDALEDDPEKTDVTTGYFTAVGAVVGAD
NSSAAQVDIITQQPRSSQHTIQPGDSVDLSASSEQGGRGGGASASDTPESPNDEEDMLSR
SSSCGANITPETVEDATPENPAQEGRPVGGSGAYDHSLPPSDSSQTTTEGPDSAVTPSDV
AELVLDGSESQYSGMQIGTLQDEEDEGTATSSQEDPPDPFLRSALALSKPHLFESRGHNR
QGSDSSVDRFIPKDEPPEPEPDNKMSRIKGAIGHYTDRGAEPVVHCVRLLSASFLLTGQR
NGLTPDRDVRVSVKALAVSCVGAAAALHPEAFFNSLYLEPLDGLRAEEQQYISDVLGFID
HGDPQIRGATAILCAAIIQAALSKMRYNIHSWLASVQSKTGNPLSLVDLVPLLQKALKDE
SSVTCKMACSAVRHCIMSLCGSTLSELGLRLLXDLFALKDSSYWLVRTELLETLAEMDFR
LVNFLERKSEALHKGDHHYTGRLRLQERVLNDVVIQLLGDDDPRVRHVAASAVSRLVSRL
FFDCDQGQADPVVAIARDQSSVYLQLLMHETQPPSQLTVSTITRTYRGFNLSNNVADVTV
ENNLSRVVTAVSHAFTSSTSRALTFGCCEALCLLAVHFPICTWTTGWHCGHISSQSSFSS
RSSVGRSRGRTPSVSQSGSTPASSTTSSAVDPERRTLTVGTANMVLSLLSSAWFPLDLSA
HQDALLLCGNLLAAVAPKCLRNPWAGEDDSSSSSTNTSGGTHKMEEPWAALSDRAFVAMV
EQLFSHLLKVLNICAHVLDDTPPGPPVKATLPSLTNTPSLSPIRRKGKDKDAVDSSSAPL
SPKKGNEANTGRPTESTGSTAVHKSTTLGSFYHLPPYLKLYDVLKATHANFKVMLDLHSN
QEKFGSFLRAALDVLSQLLELATLNDINKCVEEILGYLKSCFSREPTMATVCVQQLLKTL
FGTNLASQYEGFLSGPSRSQGKALRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNMV
QAEHEQDTSGWFDVMQKTSNQLRSNIANAARHRGDKNAIHNHIRLFEPLVIKALKQYTTS
TSVALQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIFF
FLVLLSYERYHSKQIISIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKAD
AGKELETQKEVVVSMLLRLVQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMIA
KQQMHLDSPEALGVLNTLFETVAPSSLRPVDMLLKSMFTTPVTMASVATVQLWVSGILAV
LRVLVSQSTEDIVLSRIHELSLSPHLLSCHTIKRLQQPNLSPSDQPAGDGQQNQEPNGEA
QKSLPEETFARFLIQLVGVLLDDISSRHVKVDITEQQHTFYCQQLGTLLMCLIHVFKSGM
FRRITVAASRLLKGESGSGHSGIEFYPLEGLNSMVHCLITTHPSLVLLWCQVLLIIDYTN
YSWWTEVHQTPKGHSLSCTKLLSPHSSGEGEEKPETRLAMINREIVRRGALILFCDYVCQ
NLHDSEHLTWLIVNHVRDLIDLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCDNLNSPT
MLKKTLQCLEGIHLSQSGSLLMLYVDKLLSTPFRVLARMVDTLACRRVEMLLAETLQNSV
AQLPLEELHRIQEYLQTSGLAQRHQRFYSLLDRFRATVSDTSSPSTPVTSHPLDGDPPPA
PELVTADKEWYVALVKSQCCLHGDVSLLETTELLTKLPPADLLSVMSCKEFNLSLLCPCL
SLGVQRLLRGQGSLLLETALQVTLEQLAGATGLLPVPHHSFIPTSHPQSHWKQLAEVYGD
PGFYSRVLSLCRALSQYLLTVKQLPSSLRIPSDKEHLITTFTCAATEVVVWHLLQDQLPL
SVDLQWALSCLCLALQQPCVWNKLSTPEYNTHTCSLIYCLHHIILAVAVSPGDQLLHPER
KKTKALRHSDDEDQVDSVHDNHTLEWQACEIMAELVEGLQSVLSLGHHRNTAFPAFLTPT
LRNIIISLSRLPLVNSHTRVPPLVWKLGWSPQPGGEFGTTLPEIPVDFLQEKDVFREFLY
RINTLGWSNRTQFEETWATLLGVLVTQPITMDQEEETQQEEDLERTQLNVLAVQAITSLV
LSAMTLPTAGNPAVSCLEQQPRNKSLKALETRFGRKLAVIRGEVEREIQALVSKRDNVHT
YHPYHAWDPVPSLSAASPAGTLISHEKLLLQINTERELGNMDYKLGQVSIHSVWLGNNIT
PLREEEWGEDEDDEADPPAPTSPPLSPINSRKHRAGVDIHSCSQFLLELYSQWVIPGSPS
NRKTPTILISEVVRSLLAVSDLFTERNQFDMMFSTLMELQKLHPPEDEILNQYLVPAICK
AAAVLGMDKAIAEPVCRLLETTLRSTHLPSRMGALHGVLYVLECDLLDDTAKQLIPTVSE
YLLSNLRAIAHCVNLHNQQHVLVMCAVAFYMMENYPLDVGTEFMAGIIQLCGVMVSASED
STPSIIYHCVLRGLERLLLSEQLSRVDGEALVKLSVDRVNMPSPHRAMAALGLMLTCMYT
AVLTSGSDVAGVRGQVESGSAVAEALGVTAGHVGLFSGKEKASPAARSAHSDPQVPDSES
IIVAMERVSVLFDRIRKGLPSEARVVARILPQFLDDFFPPQDIMNKVIGEFLSNQQPYPQ
FMATVVYKVFQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWIS
ALLPHVISRMGSSDVVDVNLFCLVAMDFYRHQIDEELDRRAFQSVFETVASPGSPYFQLL
ACLQSIHQDKSL
NT seq
9579 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaattgatgaaggccttcgaatctttgaagtcattccagcagcaa
caaggaccaccaaccgccgaggaaatcgtccaaagacaaaaaaaggaacaggctaccacg
aagaaggacagggtgtcgcactgcctgacaatatgtgaaaacatagtggctcagtctctg
agaacatctccagaatttcagaaactgctcggcatcgccatggagatgttcctgctctgc
agtgacgacagtgaatcagacgtccggatggtagctgacgagtgcctgaacagaatcatt
aaagccctgatggattccaatctgcctcgactgcagcttgagctgtataaagaaattaaa
aagaatggtgcctcccggagtctgagggcagccttgtggaggtttgctgagctggcccac
ctgatccgaccacagaagtgcagaccctacctggtcaacctgctcccgtgcctcaccaga
attaccaaacggcaggaggagaccatccaggagacgctggccgccgccatgcccaagatc
atggctgctctgggacacttcgctaacgatggagagatcaagatgctgttgaagtcattt
gtggccaacctgaagtccagctcgccgaccatcagacggacggcggcgagctcagcggtc
agcgtgtgccaacactccagacgcaccagctacttctacacctggctccttaacgtgctg
ctcggtctactggtgccggtagacgaggagcaccacagccacctgattctgggcgtgctg
ctaaccctccgctacctgatgcctctgctgcagcagcaagtcaacaccatcagcctgaaa
ggaagctttggcgtcatgcagaaggaggccgatgtgcagccggctcccgaacagttgctc
caggtgtatgagctgacgctacactacacgcagcactgggaccacaacgttgtcacggca
gctctggaactcctccagcagacgttaaggacgccgccgccggagcttttgcacgtgctc
atcactgccggcagcatccaacacgccagcgtgtttcgccaggacatcgagagccgtgcc
cgttctggcagcatcctggagctcatcgctgggggagggtctacctgcagtccactcctt
cataggaagcatagaggtaaaatgctctctggtgaggaagatgcgttggaggatgatcca
gaaaaaacagacgtcacaactggttatttcacagccgttggtgcagtagttggtgcagac
aactcctcggctgcacaggtggacataatcacccagcagccccggtcatcccaacatacc
atacagcccggcgattccgtggacctcagtgcctcgtcggagcagggaggcaggggaggt
ggggcgtccgcttcagacactcccgagtctcccaatgacgaggaggacatgctcagtcgg
agctccagctgtggggccaacatcactccagaaacggtcgaagacgccacgcctgaaaat
ccagcgcaggaaggacggcccgtaggaggaagtggagcttacgatcattctctcccaccc
agtgactcctcccagaccacgacagaaggaccagactcggctgtgacgccttcagatgtg
gcagaactggttctggatggcagcgagagccagtattctgggatgcagatcggaacacta
caagacgaagaagacgaagggacggcgacttcctctcaagaagaccccccagacccgttc
ctgcgctcggcactggctctgagtaagcctcacctgtttgaaagtagaggtcacaacaga
cagggttcggacagcagcgtggatcgtttcatccccaaagacgaacctcctgaacctgaa
cccgacaacaagatgtcgcggattaagggtgccattggacattacaccgacaggggggcg
gagccagtggtgcactgtgtacggcttctgtcggcatccttcctgctgacaggacagagg
aatgggttaacccctgacagggacgtgcgcgtgagcgtgaaggccctggcagtcagctgc
gtcggagcggcagcagctttacacccggaagctttcttcaattccctgtatctggagccg
ctggacggcctccgcgctgaagagcaacagtacatcagtgacgttctaggctttattgac
cacggagaccctcaaatcagaggagccacggccattttgtgtgcagccatcatccaggcg
gcgctcagtaaaatgcgctacaacatccacagctggctggccagcgtgcagagtaaaaca
ggcaatcctctgtccctggtggacttggtgcctttgttacagaaagccctgaaagatgaa
tcctcagttacctgcaaaatggcttgttctgcagtgaggcactgcatcatgtcgctgtgt
ggcagcacgctgagcgagctcggcctgcggctgctgngggacttgttcgcgctcaaggac
tcttcctactggcttgttcggacggagctcctggaaacgttggccgagatggatttccgt
ttagttaattttctggagagaaaaagtgaagctctgcacaagggggatcatcattacact
gggcgactacggctgcaggaacgagtcctaaacgacgttgtcatccagctgttgggagac
gatgaccccagagttcgtcacgtggcagcttctgccgtcagcaggctcgtctccaggttg
ttctttgattgtgaccaggggcaggcagacccggtcgtagctattgcacgggaccagagt
tctgtttacctgcagctgctgatgcatgaaacacaacctccctcgcagttgacagtcagt
acaatcacaaggacatacagaggcttcaacctttccaacaacgtggccgatgtcacagtg
gagaacaacttgtccagagtcgtcactgccgtctcccatgctttcacctcatctacctcc
agagctctcacttttggctgctgtgaagccttgtgcctcctggctgtacattttccaatc
tgcacgtggaccacaggctggcactgtggccacataagctcccagagcagtttttcttcc
cgctcaagtgtcggtcgcagcaggggcaggacacccagtgtgtctcagtcaggcagcact
ccggcctcttctacaacatcctctgctgtagatcctgagcggaggacgctgaccgtgggg
acggctaatatggtgctgtcattactctcctctgcctggtttccactggatctctctgcg
caccaggatgcacttctgctttgtggcaatctgcttgctgccgtagctcctaaatgcctg
cggaatccctgggccggggaagatgacagcagcagcagcagcactaacactagtgggggc
acccataaaatggaggaaccctgggcagccttgtcggatcgtgcatttgtggcaatggtt
gagcagctattttcccaccttctgaaggtcctcaacatttgtgcccatgtgctagatgac
acaccacctgggccaccagttaaggccaccctcccatccctcacaaacaccccctcactc
agtcccatccgcagaaagggcaaagacaaggatgcggttgattccagctctgccccttta
agccccaaaaaaggcaatgaggccaacacaggtaggccaacagaaagcacaggatcaaca
gcagtgcataaatctaccacccttggcagcttctaccacctgcccccctacctcaagctg
tatgatgtcctcaaagccacacacgccaactttaaggtgatgctagacctccacagtaac
caggagaagtttggcagcttcctgcgcgccgctctcgacgtcctctcgcagctccttgag
ttggccacgctaaatgatatcaacaagtgtgtggaggaaatcttgggctacctcaagtcc
tgtttctccagagaaccgaccatggctactgtgtgtgtgcagcagctgttgaagaccctg
tttggtaccaatctggcctcccagtatgagggttttctgagcgggcccagccgttcgcag
ggcaaagcccttcgtctcgggtcgtccagcctgcggccaggcctctaccactactgcttc
atggccccgtacactcacttcactcaggctcttgctgatgctagtcttcgcaacatggtg
caggctgaacatgagcaggatacttctgggtggtttgatgtaatgcagaaaacctcaaac
cagctgaggtccaacattgctaacgctgcacgccatagaggagacaagaatgccatccac
aaccacatacgcctgtttgagccgctggtcattaaagctttgaagcagtacactaccagc
acatctgtggccctgcagagacaagtgctggacctgctggcacagctggtgcagctccga
gtcaactactgcctgcttgattctgaccaggtgttcatcggtttcgtcctcaagcagttc
gagtacatcgaagtgggacagttcagagattccgaagcaatcattcccaacatcttcttc
ttcttggtgctcctgtcatatgagcgttaccactccaagcaaattatcagcatcccaaag
atcattcagctttgtgacggcatcatggcaagtggcaggaaagctgttactcacgccatc
cctgctctgcagcccatagttcatgatctgtttgtgttgagaggctccaacaaagcagat
gcaggcaaagagctggaaacgcaaaaagaggtggtcgtttccatgctgctccgacttgtg
cagtaccatcaggtgttggagatgttcattcttgtactacagcaatgtcacaaagagaat
gaggataagtggaagcgactgtcccggcaaatagccgatgtcatactgccgatgattgct
aagcaacagatgcacctggactctccagaggcattgggagtgttgaacactctgtttgag
actgtagctccttcttctctcagacctgtagacatgttgttaaagagtatgttcacaacc
ccagttaccatggcatctgtagctacagtacagttgtgggtgtcgggtattttggcagtc
ctcagagtgcttgtgtctcagtccactgaggacattgtcctgtcccggatccatgagctg
tccctctccccacatctcctctcctgccacacaataaagcgccttcagcagccaaacctc
tcaccgagtgatcaacctgcaggtgacgggcagcagaaccaggagcccaacggcgaggcc
caaaaatcccttcctgaggaaacctttgccagattcctgatccagctggtaggagtgctg
ttggatgacatctcttccagacatgtcaaagttgacattacggagcaacaacacaccttc
tactgccaacagctgggcacccttctcatgtgtcttattcatgtattcaaaagtgggatg
tttcgcagaatcactgttgcagccagccgtcttttgaagggcgaaagtggaagtggacat
tctgggatagagttttaccccttagaggggctgaacagcatggtgcattgcctgatcacc
acccacccctccttggtgctgctgtggtgccaggtcctcctcatcattgactacaccaac
tactcctggtggactgaggtacaccagacgcctaagggacacagcctctcgtgtacgaag
ctgctgagtcctcattcctcgggagaaggagaggagaagcctgagacgcggctagccatg
attaatagagagattgtacgcaggggagccctcattcttttctgtgactatgtgtgtcag
aacctccacgactcagagcatctgacctggctgattgtcaaccatgttcgggacctcatt
gacctttcccatgagcctccggtgcaggatttcatcagtgcagttcaccgcaactctgcc
gccagcggcctcttcatccaggccattcagtcccgctgtgacaaccttaattcgcctaca
atgctgaaaaagacactgcagtgtttggaaggcatccacctaagtcagtcgggctcgctg
ctgatgctgtacgtggataagctcctcagcacaccgtttagggttttggctcgcatggtg
gatacgctggcgtgtcgcagggtggagatgctgctagcagagacattacagaatagtgtt
gctcagctgcctttggaggaactgcataggatccaggagtatctccagaccagtggtctt
gctcagaggcatcagaggttctactctcttctggaccggttcagagccacagtatctgac
accagcagcccctcaacacctgtgacatcacaccccctggatggtgatcccccacccgcc
cctgagctggtcactgcagataaggagtggtatgtggccctggtaaagtcccagtgttgt
ctccatggagatgtttccctgttggagacaacagaacttttaaccaaactacctcctgct
gacctcttgagcgtcatgagttgcaaggaattcaacctaagtctcctatgtccatgcctg
agtttgggtgtgcagcggttgctacggggtcagggctccctcttgttggaaacggcttta
caagtgaccctagaacagcttgctggggccaccggattactccctgttccgcaccactcc
tttattccaacctcccatccacagtcacactggaagcagctagctgaggtgtatggtgat
ccaggtttctactccagggttctgtcactatgtcgagctctgtcccagtacctgctgact
gtcaagcagctgccttcctctctgcgcatcccctctgataaagaacatctcatcactact
tttacctgcgctgccactgaggtggttgtgtggcacctactccaggaccagttgcccctg
agcgtggacctgcagtgggctctgtcatgtctgtgcttggccctgcagcaaccttgtgtc
tggaacaaactgtccaccccagagtacaacacgcatacctgctccctcatctactgctta
catcacatcattttggcagtggctgtaagtcctggtgaccagcttctgcatccagagagg
aaaaagaccaaagcgctgcgacactctgatgatgaagaccaagttgactctgtccatgac
aaccacactttagagtggcaagcctgtgagatcatggcagaactggtggaaggtcttcag
agcgtcctttccctgggccaccatagaaacactgctttccctgctttcctcacaccgact
ttacgcaatatcatcatcagtctgtcccgactgcctctggtcaacagccatactcgcgtg
cctccactggtctggaaactgggctggtcccctcagccaggaggagagtttggcaccacc
ctgcctgagatacctgtggacttcctgcaagaaaaagatgttttcagagagttcctgtac
cggattaacactttgggctggagcaataggactcagtttgaggagacctgggccacttta
ttgggggtgctggtcacccaacccatcactatggaccaggaggaggagacacagcaggag
gaggaccttgagcgtacccagctgaacgtgttggcagtgcaggccatcaccagcctggtg
ctgagcgccatgaccctgcccactgctggcaaccctgcagtcagctgtctggaacagcag
ccccgtaacaagagcctcaaggccctggaaacacggtttgggaggaagcttgcggtgatc
aggggagaggtggagagggagattcaggctcttgtgtcaaagagggacaacgtccatacg
taccacccataccacgcttgggaccctgtgccctcattgtcggcagcctcacctgcaggc
acgttgataagccacgagaagctgctgcttcagatcaacaccgagagggagctgggcaac
atggactacaagctggggcaggtctctattcactccgtgtggcttggtaacaacataacc
ccactgagagaagaagagtggggtgaggatgaagacgatgaagcagaccctccagccccc
acctctccaccattatcgcccatcaactcaaggaagcatcgtgcaggtgtggacattcat
tcgtgctcccagtttcttctggagctctacagccagtgggtcatcccaggctcccccagt
aacaggaagaccccaaccatactcatcagtgaagtcgttcgatcgctgctggcagtgtcg
gacctgttcacagagaggaaccagtttgatatgatgttctccacattaatggaactgcag
aaactccacccaccagaggacgagatcctcaatcagtacctggtccccgccatctgcaaa
gctgccgccgtgctgggaatggacaaagcaatagcagagcctgtgtgtcggctcttggag
acaacgctgcggagcacccacctgcccagccgcatgggggctctccatggagtgttgtac
gtgttggagtgtgacctgctggacgacacggccaaacagctcatccccacggtctccgag
tacctgctgtccaacctgagggctatagctcattgtgtgaatctgcataaccagcagcat
gtgttggtaatgtgcgcggtggccttctacatgatggagaactaccccctggatgtgggg
accgagttcatggcgggaatcatacagctctgcggcgtgatggtgtcggccagtgaggac
tccacaccctccatcatctatcactgcgtcctccgtgggctcgagcgcctcctcctgtcg
gagcagttgtctcgtgtcgacggggaagcgctggtcaaactcagtgtggacagagtgaac
atgccatcgccacacagggccatggctgccctgggcctcatgctaacctgcatgtacacg
gcggtgctcacatcaggttcagatgtggcaggggttagaggtcaggttgagtctggctct
gctgtagcagaggcgctgggcgtcacggcgggtcatgttggtttgttctcaggcaaggag
aaagccagccctgccgctcgctccgcccactctgacccacaggtccctgacagcgagtcc
ataatcgttgccatggagagggtgtctgtgctctttgacagaatccgaaaaggtttaccc
agtgaagcgcgggtggtagccagaatcctaccacagtttctggatgacttcttcccacca
caggatatcatgaacaaggtcatcggagagttcctgtctaatcagcaaccatacccacaa
ttcatggctactgtcgtctacaaggttttccagacactccacgccacgggccagtcctct
atggtgcgagactgggtgctgctgtccctgtccaacttcacccagaggaccccggtggcc
atggccatgtggagcctctcctgcttcttcgtctctgcgtccacctcccagtggatctcc
gctctgctgccgcacgtgatcagccgcatgggttccagcgatgttgtggacgtcaacctt
ttctgtctagtggccatggatttctaccggcaccagattgacgaggagctggaccgcagg
gctttccaatcggtcttcgagaccgtggcctcgccgggcagtccgtacttccagctgcta
gcttgtctgcagtcgatccatcaggataaatcgctctaa
DBGET
integrated database retrieval system
