Takifugu flavidus (sansaifugu): 130527106
Help
Entry
130527106 CDS
T09160
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130527106 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130527106 (herc3)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130527106 (herc3)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
HECT type E3
130527106 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
130527106
NCBI-ProteinID:
XP_056891228
LinkDB
All DBs
Position
6:3248882..3262218
Genome browser
AA seq
1049 aa
AA seq
DB search
MLCWGKAKDGQLGIGVERDPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSN
SCGQLGHNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTT
ETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFP
QPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRS
QKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITC
GRHHTLAFAPSSGGVYAFGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTDSKKYSVT
KITCGGDHSFLLYSNDQNSEYPEDFRVINISNAISPINYERLNSWRLKMMCNKDSGVTND
INIQLSSTACWNASFLDQSDDAHFSTNPKIPGIDLNSVRMFFATLSTPAFSALLEQATKS
FESVLIPQLPRSPPDVEAMRIYLILSEYPALQDSKNYIRLTIPLAMAILRLDANPSKVLD
NWWCFVDDSVFTRMVDMYKSIVVFLLRGGKTLLVPVSYENHFVATLRLLEKLHKVNLKAQ
HVEYNHFYIPDITSMVDIQEDYLKWFLSKAQIKVESPSPSQTDFPSVNLCAYPFLLNAQA
KTTMLQTDAELQMQMAVSGANLHNVFMLLTLEPQLARNPYLVLHVRRNHLVSDTLRELTS
YSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTFHTESNLLWFSDKC
FVEQKWFHLIGIICGLAIYNSTVVDLHFPLALYKKLLDVSPTLEDLKELSPTEARSLQQL
MDYDREDVEEAFLLTFAITRENYGITEVKELVPGGESIGVDKNNRKEFVEAYLRYIFRDS
ASEQYTAFSTGFLKVCGGEILSLFQPCELMAMVVGNSNYNWEVMEKNTVYKGEFTATHPT
VRLFWEVFHEFSLEKKKQFLLFLTGSDRIPIHGMESLRIIIQSTTAEEHYLPVAHTCYNL
LDMPRYQTKEILRCRLTQAVEQYEGFSLV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaaagcaaaagatgggcagttgggtattggagtggagagggatccc
atgtttgagccaagaaactgtaacgtgttcactggcaggggcctgaaagaaatagtctgc
ggaggacaacattcagtgttcctgttgcatgatgggagcgtgtacacatgtgggtctaac
agctgtggacagttaggccacaataaaccagggataactccagagtttgttggagctctg
gatactcagaagatcacgctagtgtcgtgtggtcaggcccattctttggccgtgaatgag
cagggccaggtgtttgcctggggagcaggtgaagagggccaactcggattaggaaccaca
gagacggcagttcggataccaaggttgatcaaaaggctgtgcgaccaccgaatagctcaa
gtgatgtgtggaaatcagcactgcattgcactttctaaagatggccagctgttcacgtgg
ggtcagaacaccagcggtcagctcggactggggaagggtgagcccagcaagctgtttcca
cagcccctcaagtctctggcagggatcccgctggcaaagatcaccgcgggcggagaccac
agctttgccctctctctgtccggagctgtgtttggatggggcaagaacaaagctggacaa
ctgggtctcaatgatattcaagaccgggctgtcccgtgccacatcaagtttctgagatct
caaaaagtcgttcacatcagctgtggggaggagcacacagcagctctcaccaaggatgga
ggcttgtttacctttggagatggctcgtggggccagctgggccacggctccaccgccaat
gagcttctaccccgacgagtgctggagctgatgggtactgaggtgtcccagatcacctgt
ggcaggcaccacactctggcctttgcgccttcctctggtggagtttatgcatttggatgt
aacagccatggtcagctcggcacaggagtactgagtgctgacaaaagcccctatcctctg
aagaccagcttcctgtcgggaagtattcatggaacagactccaaaaaatattcagtgacc
aaaatcacctgtggaggagaccatagctttttattgtactctaatgatcagaattctgaa
tatccagaagattttagagtgatcaacatcagcaacgcaatctccccgatcaattacgag
cgattgaattcctggaggttaaagatgatgtgcaacaaggattctggtgtcacaaatgac
atcaacattcagctctcctccacagcttgttggaacgccagcttcttggaccaaagcgat
gatgctcattttagtaccaacccaaagatcccgggcatcgatctcaactcggtcagaatg
ttctttgctacactcagcacaccagctttctctgcactactggagcaggccaccaagagt
tttgagagcgtgctgatcccccagctaccgcgatcccctcccgatgttgaggccatgagg
atttacctcatcctgtctgagtacccagccctgcaggactccaagaactacatccgcctc
accattcccctggcaatggccatcctgcggctggacgccaaccccagcaaagtcttggat
aactggtggtgtttcgtggacgacagtgtttttaccagaatggtcgatatgtacaagagc
atcgttgtgtttttgctgagaggaggcaagacactccttgtccccgtctcttatgagaac
cattttgttgccacattgaggctgctggaaaaactccacaaggtaaacttaaaggcccaa
cacgtggagtacaaccacttttatatccctgacatcaccagcatggtggacatccaggaa
gactacctcaaatggtttctgagtaaagctcagataaaagtggaatccccctctccgtca
cagaccgactttccctcagtgaacctgtgtgcctacccgttcttactgaacgctcaagcc
aagacaaccatgctgcaaacagatgctgaactgcaaatgcagatggcagtcagcggtgca
aacttgcacaatgtctttatgctgctcaccctggaacctcagctcgccaggaacccttat
ttagtgctccacgtgcggagaaaccatttggttagtgacacgctgcgcgagctcacctcc
tattctgacgtggacctcaagaaaccgctgaaggtgatctttgatggtgaggaagccgtg
gatgcaggaggagtcacaaaagagttcttcctgctgctcttaaaggagctcatggatccg
gtttatggcatgttcacctttcacactgagtccaacctgctgtggttctcagacaaatgc
ttcgtagagcagaaatggttccacctgatcggcatcatctgcggcctggccatctacaac
tccacagtggtggaccttcacttccccctggctctctacaagaagctgctggatgtgtcg
cccacgctggaggacttgaaggagctgtcccccaccgaggccaggagtctgcaacaactt
atggactatgacagagaagatgtggaggaggcatttcttctcacctttgctatcactcga
gagaattacgggattactgaagtgaaggaacttgttcccggaggagaaagcatcggcgtg
gacaaaaacaacaggaaggagttcgtggaggcctacctgcgctacatcttccgggactct
gccagcgagcagtacaccgccttctccaccggcttcctgaaggtgtgcgggggggagatc
ctgtcgctcttccagccttgtgagctgatggccatggtggtgggcaacagcaactacaac
tgggaggtgatggagaagaacaccgtttacaaaggcgagtttacagccactcatccaaca
gtcagattgttctgggaggttttccatgagttctcactagagaagaagaagcagttcctg
ttgttcctcaccggcagcgaccggattccgatccacggcatggagagcctgcgcatcatc
atccagtccaccacggcggaggagcactacctgccggtggcccacacctgctacaacctg
ctggacatgccccgctaccagaccaaagagatcctccgctgtcgcctcacccaggccgtg
gagcagtacgaaggcttcagcctggtctga
DBGET
integrated database retrieval system
