Takifugu flavidus (sansaifugu): 130527191
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Entry
130527191 CDS
T09160
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-V-like
KO
K06487
integrin alpha V
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04081
Hormone signaling
tfs04145
Phagosome
tfs04148
Efferocytosis
tfs04510
Focal adhesion
tfs04512
ECM-receptor interaction
tfs04514
Cell adhesion molecules
tfs04810
Regulation of actin cytoskeleton
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
130527191
04512 ECM-receptor interaction
130527191
04514 Cell adhesion molecules
130527191
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130527191
04148 Efferocytosis
130527191
09144 Cellular community - eukaryotes
04510 Focal adhesion
130527191
09142 Cell motility
04820 Cytoskeleton in muscle cells
130527191
04810 Regulation of actin cytoskeleton
130527191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130527191
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfs04147
]
130527191
04515 Cell adhesion molecules [BR:
tfs04515
]
130527191
04090 CD molecules [BR:
tfs04090
]
130527191
Membrane trafficking [BR:
tfs04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130527191
Exosome [BR:
tfs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130527191
Exosomal proteins of epithelial cells
130527191
Cell adhesion molecules [BR:
tfs04515
]
Integrins
Integrin alpha subunits
130527191
CD molecules [BR:
tfs04090
]
Proteins
130527191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
LYRIC
Motif
Other DBs
NCBI-GeneID:
130527191
NCBI-ProteinID:
XP_056891412
LinkDB
All DBs
Position
1:433478..449603
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AA seq
1042 aa
AA seq
DB search
MDRGRAVVGLLVLVLVLAQRSGSFNLDVEQPSVFSGPERSYFGFSVDFFHPADKQSSDVL
IGAPRANTSSDGIVERGAVFSCPWRSSTCQKIEFDSSGDRTNEEGAKMEFKSRQWFGASV
RSDGEHILACAPLYQWSTFGVSEREPVGTCFLKKGSRVVEYSPCRSVANSPEGQGFCQAG
FSVDFLKQNNRVLVGGPGSFYWQGQLISDSISEIFNRFDGKFITPYGNTQATKSAGANYD
DSYLGYSVTVGDFNRDGKEDYVAGVPRGEKALGYVNIFNALNMESMVNFTGTQMAAYFGH
SVAASDVNNDGLVDLLVGAPLFMDRGSDGKLREVGQVSVYLGRGGFSFQPPQMLTGSEVY
ARYGSAIAALADLDMDGYNDVAISAPYGGPQHQGLVYIHNGRAQGPDPTPSQVLQGKWAS
SYMPASFGYSLSGSTDIDQNGYPDLIVGVFGADKAVLYRARPVIXVNASLDISPQIINPE
EKTCTLPGTSITVSCFKVKYCLKASSRGAPATLNFNIELVLDRLKQKEATKRVLFLHSRT
FQYSKNMAVSNGRAPSCEEQFVFLRDDREFRDKITPISVVMEYQLDYQQAADKTGLKPII
DTAAPPNVTKQAHILLDCGDDNICKPDLKLAVRRCIYVGDDNALTLEVSAENRGEGAYEA
ELHVYPPQQADFTGVVRSQTLSRLSCAYKKENQTKMVVCDLGNPMKGGTKVLAELRFSVH
QLSEEDTTVKFDLQIVSSNQFNNTSPRVSSVTQLAVLAKVSIRGTSSPGQVFLPIANWKT
KEPPVVGDDIGPQIVHVYELLNNGPSTFSKAALEVEWPHQFRNGSLLYITSYETEGPINC
TTDVEINPLRVSNPLSPAKNTSGDVVPPRERETEGRNRNHVRKRDLESREGQNDLQTLDC
STADCLRLRCQVGRLERRKNAIVFIYARLAVDSFLRTENQNRSYVVRSAASFSVIEMPYK
NLPAELPSNSTAVSLSVVWVAEPPGPIPAWVVALAVLAGLLLLALLIFIMYKLGFFKRVR
PPQEDCTEKEQLQPEENGNTDA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggatagaggacgggccgttgtcggcctactggttctggttttggttctagcccagcgc
tctggctcctttaacctggacgtggaacagccgtccgtgttctccggaccggagcggagc
tatttcggcttctcagtggacttcttccaccccgcggacaagcagagctcagatgttctg
atcggtgctcctcgggccaacacttcctcagatggtattgtggagaggggagcggtgttt
agctgtccctggaggagctccacctgccagaagattgagtttgacagctcaggtgacagg
accaacgaagaaggagccaagatggagtttaaatccaggcagtggttcggagcttcagtc
cgatctgatggagaacacatcctggcctgtgctcctctctatcaatggtctacctttggt
gtttctgagcgggagccggttgggacgtgtttcctgaagaaagggtccagggtggttgag
tactcgccctgcagatcagtggccaactcaccagagggacagggattctgccaggctggc
ttcagcgtggacttcctgaagcagaataacagagtgctggtgggaggaccaggaagtttc
tactggcagggtcagctgatttcagacagtatctctgaaatttttaaccgctttgatgga
aagttcatcactccatatggaaacacacaagcgacgaagtcagctggggctaattatgat
gacagttaccttggatactctgtgaccgttggagacttcaatcgtgatggaaaagaggat
tatgtggctggagtccctcgtggagagaaggcactgggatatgtgaacatcttcaatgct
ctcaacatggagtccatggtgaatttcacaggtacccagatggctgcttacttcggacac
tctgtagctgcttctgacgttaataacgatgggttggtggatctgctggttggcgctcca
ctcttcatggatagaggatccgatggaaaactgagggaggtgggacaggtgtcggtgtac
ctggggcgaggtggattttcttttcagcccccacagatgctcacagggtcagaggtttat
gccagatacggttctgccatcgcagcactggcagacctggacatggatgggtacaacgat
gtggccatctctgctccttatggtggcccccagcatcagggtttagtctacatccataat
ggccgggctcagggacctgaccccaccccttcacaggttctgcagggcaaatgggcctcc
agctacatgcctgcgagctttggttactccctgagtggaagcaccgacatcgaccagaac
ggatatccagatttaatagtgggggtgtttggagctgacaaagctgttttgtacagagcc
cgtcccgtcatcnaggtgaatgcttccttggacatctcccctcagatcattaacccagag
gagaagacctgcactcttcctggtaccagcataactgtttcctgttttaaggtcaagtac
tgtctgaaggccagcagtcgtggcgctccggccaccctcaatttcaacattgagctggtg
ttggaccgtctgaagcagaaggaggccacaaagcgcgtcctgttcctgcacagtcggacc
tttcagtactccaaaaacatggctgtgtccaatggcagagcgccgtcctgtgaggagcag
ttcgtcttcctgagggacgaccgtgagttccgagataagatcacgcccatctccgtggtg
atggagtaccaactggactaccagcaggccgcggataagactggactcaagcccatcatt
gacacggccgcgccccccaatgtcaccaagcaggctcacatcctgttggactgtggagac
gacaacatctgcaaacccgacctgaagctggcggtcagaaggtgcatctacgtgggcgac
gacaacgctctgacgctggaagtcagcgccgagaaccgtggagagggcgcctacgaggcc
gagctccacgtctacccgccacagcaggccgacttcaccggtgtggtccgcagccagact
ctcagcaggttgtcctgcgcttacaagaaggagaaccagacaaagatggtggtgtgtgac
ctgggaaaccccatgaagggtgggaccaaggtgctggcagagctgcgcttcagtgtgcac
cagctgtcggaggaggacacaaccgtcaagtttgacctgcagatcgtcagctctaaccaa
tttaacaacaccagtcctcgagtttccagcgtcactcagctggccgtcctcgccaaggtg
tccatcagaggaacatcatctccaggtcaggtgttccttcccattgctaactggaagact
aaagagcctccggtggttggagacgacatcggaccacagatagttcacgtctatgagctc
ctcaacaacgggcccagtacgttcagtaaggcggcgctggaggtggagtggccgcaccag
ttcaggaacggctcgctgctctacatcaccagctacgagacggaaggacccatcaactgc
accaccgacgtggagatcaacccgctgcgagtgtcgaacccattatctccagcaaagaac
accagtggggatgtggttccacccagagagcgagagactgaaggacggaaccgaaaccat
gttcgcaagagagacctggagtccagagagggacagaacgacctgcagacgctggactgc
agcacagcagactgcctgcggctcaggtgtcaggtgggtcgtctggagaggaggaagaac
gccatcgtcttcatctacgcccgcctggctgtggacagcttcctcaggacagagaaccag
aaccgatcctatgtggtccgatcggcggcctccttcagcgtcatcgagatgccgtataag
aacctcccagcggagctgccgtccaacagcaccgccgtcagcctgtcggtggtctgggtg
gccgagccccccgggcccatcccggcctgggtcgtggccctggcggttctggccgggctg
ctgctgctggccttgctcatcttcatcatgtacaagctgggcttctttaagcgggtgcgc
cccccccaggaggactgcacagagaaggagcagctgcagccagaggagaatggaaacacc
gatgcttag
DBGET
integrated database retrieval system
