Takifugu flavidus (sansaifugu): 130527205
Help
Entry
130527205 CDS
T09160
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130527205 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130527205 (dhx15)
03009 Ribosome biogenesis [BR:
tfs03009
]
130527205 (dhx15)
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130527205 (dhx15)
Spliceosome [BR:
tfs03041
]
Complex A
U2 snRNP components
U2 related factors
130527205 (dhx15)
Complex B
130527205 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130527205 (dhx15)
Ribosome biogenesis [BR:
tfs03009
]
Eukaryotic type
90S particles
Helicases
130527205 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_25
SRP54
Flavi_DEAD
Atrophin-1
nSTAND3
AAA_29
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
130527205
NCBI-ProteinID:
XP_056891428
LinkDB
All DBs
Position
6:14541926..14547504
Genome browser
AA seq
769 aa
AA seq
DB search
MSKRHRLDLGDDYSSKKRSDGRDRDRDRDRDREDRSRDRDRDRDRDRDRDRDRDRDRDRD
TKPPSVPANSTPIIPIMPALKQMAVHQQMNPFTNLPHTPRYYEILKKRLQLPVWEYKESF
SDIITRHQTFVLVGETGSGKTTQIPQWCVDMVRGLPGPKRAVACTQPRRVAAMSVAQRVA
DEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERT
LATDILMGVLKEVVRQRSDLKIIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPE
PERDYLEAAIRTVIQIHMCEEEEGDVLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKII
PLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV
YNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSN
LGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFP
LDPQLAKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLT
LLNVYHAFKQNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYY
INIRKALCTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNY
IRTCTDIKPEWLVKIAAQYYDMSNFPQCEAKRQLERIISKLESKEYSQY
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaggcatcgtttagatttgggcgatgactactccagtaagaagaggtctgat
gggcgtgacagagacagagaccgggacagagaccgcgaggaccgctccagagacagggac
cgagatcgggacagagacagggatcgggacagggaccgagaccgggacagagaccgagac
acaaagccgcctagtgtcccagccaacagcacaccgatcatcccaattatgcctgctctc
aagcagatggctgtgcaccagcagatgaacccgttcaccaacctaccacacacaccgcga
tactacgagatcctgaagaaacggttgcagcttcccgtctgggaatacaaggagagcttc
agtgacatcatcacacgccatcagacgtttgtcctcgttggagaaactggatctgggaag
acgacacagatcccgcagtggtgtgtggacatggtgaggggtttgccgggtccaaagcgc
gctgtagcgtgtacccagcccaggagagtcgcggctatgagcgtggcgcaaagggtggcg
gacgaaatggatgtcatgcttggacaagaagtcggttactccattcggtttgaggactgt
agctccgctaagacaattctcaagtacatgacagacggtatgttactgagagaagctatg
aacgacccactgttggaaagatacggggtgataatcctggacgaggcccacgagcgaact
ctggctacagatatcctgatgggagtgctgaaggaggtggtccgtcaaagatccgatctc
aagatcatcgtcatgagtgcgactctagacgccgggaaattccagatttacttcgacaac
tgtcccctcctgaccatccccggtcgcacgcaccccgtcgagatcttctacacccccgaa
ccggagagagactaccttgaggcagccatacgtacggtcatacagatccacatgtgcgag
gaagaagaaggtgacgtcctcctctttctcaccggacaggaggaaatcgacgaggcctgc
aaacggatcaaacgggaagtggatgacctcggacccgaagtgggagacattaaaatcatt
cctttgtattccacactgccgccacagcagcagcaaaggatttttgagccgcctcctccg
cggaaacccaacggcgccataggaaggaaggtcgtggtttcaacaaacatcgccgagacc
tccctgaccatcgacggcgtggtgtttgtcatcgatcccgggttcgccaaacagaaagtt
tataatccgcgtatccgtgtggagtcgctgctggtcaccgccatcagtaaggcctccgcc
cagcagagggcaggtcgagccggccggacgcgtccagggaaatgtttccggctttatacg
gagaaagcttacaaaaccgagatgcaggacaacacgtaccccgaaatccttcggtccaac
ttggggtcggttgtgctgcagctgaagaagctgggcatcgacgaccttgtgcactttgac
ttcatggatccaccagctcccgagactctgatgagagccttggagctgttgaactacctg
gcggcgctcaatgacgacggcgacctgacggagctgggctccatgatggcagagttcccc
ctggacccacagctagcaaaaatggtcattgccagctgcgagttcaactgctctaatgag
attctttccattactgccatgctgtcagtcccacagtgttttgtccgccccacggaggct
aagaaggcggcagatgaggccaagatgaggtttgcccacatcgatggagaccatttgacg
ctgctcaacgtctatcatgccttcaagcaaaaccacgagtcgaaccagtggtgctatgac
aactttgttaactatcgatcgctaatgtccgcggacaacgtgcggcagcagctgtccagg
atcatggaccgcttcaacctgccccgccggagcacagaattcaccagcagagactactac
atcaacatccgcaaggcgctctgcaccggcttcttcatgcaggtggctcatctggagcgc
acgggtcattacctgactgtaaaagacaaccaagtggtccagctgcacccgtctacagtc
ctggaccacaaaccggagtgggtgctctacaacgaattcgttctcaccaccaaaaactac
attcgcacttgtacagacatcaagccagagtggctggtgaagatcgccgcccagtactac
gacatgagcaacttcccgcagtgtgaagctaaacgacagctggagcggatcatatccaaa
ctagagagcaaagagtattcacagtactga
DBGET
integrated database retrieval system
