Takifugu flavidus (sansaifugu): 130527231
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Entry
130527231 CDS
T09160
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04110
Cell cycle
tfs04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130527231 (smc3)
04114 Oocyte meiosis
130527231 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130527231 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tfs00535
]
130527231 (smc3)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130527231 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
130527231 (smc3)
Proteoglycans [BR:
tfs00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
130527231 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
CreS_N
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
130527231
NCBI-ProteinID:
XP_056891480
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All DBs
Position
6:12996456..13008150
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFSMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEDRDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTETNKEKNLEQYTKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVISGYHGIVMNNF
ECDPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLTKLDVRDTAY
PETNDAIPMISKLRYNTNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTLARSDDLDTLIDKTEGEIKEHIRS
MDRWKTIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGESGVDSERG
SSSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaaacaggtaatcatccaggggttccgaagttacagggaccaaacggtggta
gacccctttagtccgaaacacaacgtcatagttgggagaaatggttctggaaaaagtaac
ttcttctatgccatccagtttgtcctcagtgatgagttcagccacttgcgacccgagcag
cggttggccctgctccatgaaggaacgggcccccgtgtcatttcagcctttgtggaaatt
atatttgacaactctgacaaccgtttgccgattgacaaagaagaagtctcacttcgccgc
gtcattggcgcaaagaaggaccaatacttcttagacaaaaagatggtgacgaaaaatgat
gtcatgaatctcctggagagcgctggcttttcacgcagtaacccctactacattgttaaa
cagggcaagatcaaccaaatggccacagcacctgactcccaacgtctgaaactactgagg
gaggtggcgggaacccgggtttatgatgaacggaaggaagagagtatttctctcatgaaa
gaaacagagggaaagcgagagaagattaatgagctgttaaagtacattgaagagcgtttg
cacactttggaggatgaaaaggaggagttggctcaatatcagaagtgggataagatgaga
agagctctagaatacaccatctacaaccaggagttgaatgaaacccgtgccaaactggac
gagttgtccagcaaaagagaaacctgtggagacaaatccagacaattgcgcgatgctcag
caagatgccagagacaaagtggaggaaacggagcgcgttgtccgagaactgaagtccaag
atctctgctatgaaggaggagaaagagcagctatcggctgagcgccaggagcagatcaaa
cagaggaccaagctggagttgaaggccaaggacctgcaggatgagctggcaggcaacagt
gaacagaggaaacgtttgctgaaagaacggcagaaactgctggagaaaattgaggaaaag
caaaaagagcttcaagagacggaacccaaattcagcatggtcaaagaaaaggaagagcgt
ggaatctccagactggctcaagctacgcaggagaggaccgacttgtacgccaagcagggc
cgtggcagtcagtttacctctaaagaggacagggacaagtggatcaaaaaggagctgaag
tcactggaccaggccatcaatgacaaaaagaggcagattgcagccatccacaaagacctg
gaggacactgagaccaacaaggagaagaacctggagcagtacactaaactcgatcaagat
ctaaacgaggtcaagactcgtgttgaagaactggacaaaaagtattacgaggtgaaaaac
aggaaagatgagctccagagtgaaagaaactacctgtggcgagaagagaacgcggagcag
caggccctggcagctaagagagaggacctggagaagaaacagcagctccttcgagccgca
accggcaaggcgattctgaatggcattgatagcatcaacaaagtccttgagcattttcgc
cggaagggcatcaaccagcatgtcatcagtggttaccatggcattgtcatgaataatttt
gagtgcgatcctgctttttacacttgcgtggaggtgacagctggtaccagactgttctac
cacattgtggaaacagatgaagtcagtactaaaatacttatggagttcaacaagatgaac
ctgcctggagaagttacattcctgcctctgaccaagctggacgtcagagacactgcctat
cctgaaaccaatgatgccattcccatgatcagcaagttgcgctacaacaccaattttgac
aaggccttcaagcacgtgtttggaaagaccctgatttgccgtagcatggaggtttctact
cagctggccagagctttcaccatggattgtataactcttgagggtgaccaggtaagccac
cgcggagctctaaccggaggttactacgataccagaaagtcacgtttggagctgcagaaa
gacatgaggaaggcagaagaggagctgggtgagctggaggccaaactcaatgaaaacctt
cgaagaaacattgaacgcatcaacaatgagatcgaccaactcatgaaccagatgcagcaa
attgagacccagcagaggaagttcaaggcctccagagacagtattctctcagagatgaag
atgctgaaggagaagaggcagcagtccgagaagacgttcatgccaaaacaacgtagtctc
cagagtttagaggccagcctccacgccatggagtccaccagggaatcgctgaaggctgag
ctgggcacagacctgctctcccagctcagcctggaggaccagcgccgcgttgacgacctc
aacgacgagatccgccagctgcagcaggacaacaggcagttgctgaacgaaaggatcaag
ctggaagggatcatgacccgagtggaaacgtatcttaatgagaacttgcggaagcgtctg
gaccaagtggagcaggagctgaacgagctgcgagagacggaggggggcacggttctgaca
gccacaacatctgagctggacggcatcaacaagcgtgtcaaagacaccttggctcgatca
gacgatctggatactctgattgacaagacggagggggagatcaaggagcacataaggagc
atggaccggtggaagaccatcgagaaggagcagaacgatgccatcaaccacgacaccaag
gagctggagaagatgaccaacaggcagggaatgctgctgaagaagaaagaggagtgcatg
aagaagatcagggagctgggctcactccctcaggaggcctttgagaagtaccagaccctc
acgctgaaacagctgttcaggaagttggagcagtgcaacacggagctgaagaagtacagc
cacgtcaacaagaaagctctggaccagttcgtcaacttctcggagcagaaggaaaagctg
atcaagcggcaggaggagctggaccgcggatacaagtccatcatggagctcatgaatgtc
ctggagctccgcaagtatgaggccatccagctcaccttcaaacaggtgtcaaagaacttc
agtgaggttttccagaaactggtgccggggggcaaagccaccctggtgatgaagaagggc
gacgccgagggcagccagtcccaggacgaaggcgagagcggcgtggacagcgagaggggg
tccagctcgcagagcagcgttcccagcgtcgaccagttcacgggagtcggtatcagggtg
tccttcacagggaagcagggggagatgagggagatgcagcagctgtctggaggtcagaag
tccctggtggcgctggcgctgatattcgccatccagaaatgtgacccggctcccttttac
ctgtttgatgagatcgaccaggccctggacgcccagcaccggaaggccgtctcagacatg
atcgtggagctggcgggccacgcccagttcatcaccaccaccttcaggcccgagctgctg
gagtccgccgacaagttctacggcgtcaaattcagaaacaaggtgagtcacatcgatgtg
atcacagcagagcaagccaaagacttcgtggaggacgacaccacccacggttaa
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integrated database retrieval system
