Takifugu flavidus (sansaifugu): 130527237
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Entry
130527237 CDS
T09160
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130527237
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130527237
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130527237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
130527237
NCBI-ProteinID:
XP_056891485
LinkDB
All DBs
Position
6:complement(673415..689026)
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AA seq
716 aa
AA seq
DB search
MPVAATGQPTTQEPRVCLRLPSTPEPVPKGADLFDEAGAAERIEYGGAEGGRGLGGYTQP
GSISGTPPQSPAASTSFLFHPLHSHQMAVEPPRTRSRSRSGYYQQYSSGNGNGITSTGLM
GSNHHPNQQQHLHFQQQQQQQQQQHGAGCAPLGAPGGHTENQPGINASAGIQRFSSVPEA
HPIPAPGASGGSYHCLPDIIYGEERDKSEESPRPKRQRLSSNYVLEQLTSSALPPSTPSP
PIRPWESSPPSRRQPPSLAHYDQERCQTPVRLRRSTPVRRQRSRLSRPSHHLHPSPQGQA
LPSPPELQDGNYRHNHNPSAQQAYPTQTPSAYSQPSTTGSGGSGLEEPRAFHPPTLSSQI
LHPAARHHHHHHQQQHHGAQRQQGSVVMDLHDQQANIPVSYTVTHVPPQGLTTPLCSGQH
LPPTCSSQQQVPSCNVVISAGQHYHPVPQACSVQHFPVPYGFPSLLSSDQQFLLSHPPHL
SPHPPHLPVPGQFLHFQSQQPQTLLQRLENEVDLLGEQLSVGGGYNYAHHHHHHHHQGPS
TLPSSTPLHFLSHHDPPSQELFTISFPNFIPRLFISQRYRSQQTVPPSAYHPNFMPYFLS
IVPVPPNVAPTINVELEVENGEVENYEALLNLAERLGEAKPRGLTKADIEHIPSYKFNSN
NHHSEQTMCVVCMCDFESRQLLRVLPCSHEFHAKCVDKWLKANRTCPICRAEVQRD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcgcagccaccggtcagccgacaactcaggagccgagagtttgcctccgactg
ccctccaccccggagcctgtccccaaaggggctgatttattcgacgaagcgggggcggca
gagcgaatagagtacgggggcgcagaggggggtagaggactcggagggtacacacagccc
ggatccatcagcggcactccaccgcagtcccccgccgcgtccacctcctttctgttccac
ccgctccactcgcaccaaatggccgttgagcccccgaggactcgatcgcgctcccgatca
ggatattatcagcaatacagtagtgggaatggtaacggaattaccagcactggactcatg
ggatctaaccaccacccaaaccagcaacagcatcttcatttccagcagcagcagcagcag
cagcagcagcagcacggtgccggttgcgcaccgctcggagctcccggcggccacacggag
aaccagccaggaatcaacgcctctgccggcattcagaggttttcttcagttcccgaagcg
cacccgatcccggcaccaggagcctctggtgggtcctatcactgtctcccagacatcatc
tatggagaggagcgcgataagagtgaggaaagccccagaccgaagcgccaaaggctgtcc
agtaactatgtcttggaacagctaacctcatccgctctcccaccctccacgccgtcgccc
cccatccgaccctgggagtcatcacccccgagtcgcagacagcccccctccctcgcacac
tacgaccaggagagatgccaaactccagtccggctcagacgcagcacccctgtgaggcgc
cagcggagccgcctctccagaccttcccatcacctgcacccctccccccaaggccaagcc
ctcccatcgccgccagagctccaagatggaaactaccgccacaaccacaacccctctgca
cagcaggcatacccaacacaaacacccagtgcctacagccaaccttctaccactgggagt
ggggggtcaggcttggaagagccccgagctttccatccacccaccttgtcatcacaaata
ctccatcctgccgcacgccaccaccaccatcaccatcagcaacagcaccacggagcccag
cggcagcagggatctgtggtcatggacctccacgatcagcaggccaatattccagtctcc
tacacggtgacccacgtccctccccaaggtctcacaacgccattgtgcagcggtcaacac
ctcccccctacctgctcctcacaacaacaagtaccctcctgcaatgtggtcatcagcgct
ggacaacactaccacccggtgccgcaggcatgttcggtgcaacatttcccagtgccatat
ggcttcccctcacttctgtccagtgaccagcagttcctgctctcccacccaccccacctc
tctccccacccgccccaccttccggtgccgggacagtttctgcattttcagtcacaacag
ccacaaacactcttacagagacttgagaatgaggtcgaccttctcggagagcagctttca
gtaggcggaggctacaactacgcgcaccatcaccaccaccaccaccaccagggcccctcc
accctgccgtcttccacaccgctgcatttcctttcccaccatgaccccccctcgcaggaa
ctctttacaatttccttccccaacttcatccctcggctatttataagccagcgctaccgt
tcccagcagacggttcccccatcggcctaccaccccaacttcatgccttatttcctatct
atagtacccgtgcccccaaacgtggcccccacgatcaatgtggagttggaagtggagaac
ggagaggtggagaactatgaggctctgctgaacctcgctgaacgtctaggagaggccaaa
ccccgcggtttaactaaagccgacatcgaacacatcccctcgtacaagtttaactccaac
aaccatcattcagagcaaaccatgtgtgttgtctgtatgtgtgactttgagtctcgccag
cttctcagagtcttgccgtgttctcacgagttccacgccaagtgtgtggacaagtggctc
aaggcgaaccgaacctgtcccatctgccgcgccgaggtccagcgcgactga
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