Takifugu flavidus (sansaifugu): 130527299
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Entry
130527299 CDS
T09160
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfs03016
]
130527299 (lcmt2)
Enzymes [BR:
tfs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
130527299 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
130527299 (lcmt2)
Transfer RNA biogenesis [BR:
tfs03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130527299 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Kelch_5
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_6
Kelch_2
Motif
Other DBs
NCBI-GeneID:
130527299
NCBI-ProteinID:
XP_056891644
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All DBs
Position
1:14426215..14430849
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AA seq
683 aa
AA seq
DB search
MATKTKKQHGRDTAVQGTNDSSVVSKVSAAAQGYFQDSFLQHFVCKTSRRTPLINRGYYV
RWRAVDHCVKTFLHITGNVSRRQIVSLGAGFDSLYFRLHADGALDGAVVFEVDFPDVTKR
KAALIKGSPTLAEVFGPHLRSGTGPLCVSAGQYQLLGVDVRQKSQVEEALCAAGMDWSAP
TLILSEVVLTYMETNWSDDIISWAAKRFPQSLFVLYEQIRPNDPFGRIMQNHFLKINSRL
HAITEYPDCSAQKRRFLDLGWDQCVCLDMNQFYLGLVLEEERCRVEALEPFDEHEEWHLK
CSHYFILTASRGSLTTRALLQDDPVPSVVPSSRSHSVLSVQPVQLSVEGLGMATCLLSPE
QVLLTGGSSRAGRRAAPRLLFKGCKGWSSVSVEVSGELDVRLHHTATSLPGGDIVVFGGR
SSPLNPVSGLVRLAVEPFVSPDPAGPADGNTARLHVENMTCTGAPPAARWRHAAAVVDHS
GENFLFVFGGKRESGAVLGDACFLHLKQQHWTEFSIKGSVPEPRHSHTACSHRMGGAVVF
GGLNERGAPLGDVALLRPNGSGFAWEILEVQPSPVPRYSHSAHVIGDNLLLVGGVWLHSA
GVPDVAVINLVTRCCVEFRLDRDSVPWPLMLHSFCSEITGPEEPELLLLGGGGNCFSFGT
HFNCQPVTVDLTAALHQSELRDT
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaagacaaagaagcagcatggtagagacaccgcggtccagggaaccaatgac
agcagtgtggtgagcaaagtgtctgctgcagcacagggatacttccaggattcattcctc
caacactttgtctgcaaaaccagcaggagaacgccgctcatcaacaggggatactacgtg
cgctggagagctgtagaccactgtgtgaagacctttctgcacattactggaaacgtctcc
aggaggcagattgtgtccctgggtgcaggcttcgactcgctgtacttccgtttgcatgca
gacggcgctctcgatggagcggtggtgtttgaggtagatttccctgatgtcaccaagcgc
aaagctgctctgatcaaaggcagtccaaccctggcggaggtgttcggcccccatctgcgc
tctgggaccggaccgctgtgtgtgtctgccgggcagtaccaactgctgggggtggatgtt
agacagaagtcccaagtggaagaggctctgtgtgctgctgggatggactggtctgccccc
actcttatcctgtctgaagtggtgctcacctacatggaaactaattggtccgatgacatc
attagctgggcggctaagcgatttccacagtcactgtttgttctatacgagcagatccgt
cctaacgatccctttggtcggatcatgcagaatcatttcttgaaaatcaattcccggctc
cacgcgatcacagagtacccagactgctctgcccagaaacggaggtttttggacctgggt
tgggaccagtgtgtttgtctggatatgaaccagttctatcttggactagtcttggaggag
gagcgatgcagggtggaggctctggagccttttgatgagcatgaagagtggcacctgaaa
tgctcccattacttcatcctgactgcgtctcgcggctctctgacgacacgagctttactc
caggatgatccggttccatctgttgtcccatcatcacgcagccactcggtcctgagtgtt
caacccgtccagctcagtgtggaggggctcggcatggccacctgcctgctgagcccagag
caggtgcttctgacggggggctccagcagagcaggtaggagggcggcgccaaggctcctc
ttcaagggctgtaaaggctggagttctgtcagtgtggaggtatctggagagctggacgtg
agactccaccacactgccacctctttacccggaggggatattgtagtgtttgggggccgc
tcttctcctctcaacccagtcagcggcctcgtccgcctggcggtggagccgtttgtttcc
cctgaccccgcagggccagcggatggaaatacggcgaggcttcatgtggagaacatgacg
tgcacaggtgctccaccagctgcgagatggagacacgctgctgctgtggtcgatcacagc
ggtgagaacttcctgtttgtttttggaggaaagcgtgaatcaggggcggtgctgggcgac
gcctgtttcctgcatctgaagcagcaacactggactgagttttccatcaagggctccgtt
ccagagccccgccattctcacactgcttgttcgcaccgtatggggggggcggtggtgttc
ggaggcctcaatgagaggggagcacctctgggtgacgtggcgctgctaaggccaaatggg
tcaggattcgcctgggaaatattagaggtgcagccatctcctgttcctaggtacagccat
tcagcgcatgtaattggggataatctgctgctggttggtggcgtctggctgcattcagcc
ggtgttccagatgttgccgttatcaacctggtcacgcggtgttgtgtggagttccgcttg
gacagggactccgtaccctggcccctgatgctgcactcgttctgctctgagatcacaggc
ccagaagaaccagagctgctcctgctcggtggtggagggaactgcttctctttcgggacc
cactttaactgccagcctgtgactgtggacctcacagcagcgcttcatcaaagtgaactg
agagacacttaa
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