KEGG   Takifugu flavidus (sansaifugu): 130527432
Entry
130527432         CDS       T09160                                 
Symbol
col9a1a
Name
(RefSeq) collagen, type IX, alpha 1a
  KO
K08131  collagen type IX alpha
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs04510  Focal adhesion
tfs04512  ECM-receptor interaction
tfs04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130527432 (col9a1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130527432 (col9a1a)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130527432 (col9a1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tfs00535]
    130527432 (col9a1a)
Proteoglycans [BR:tfs00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   130527432 (col9a1a)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 130527432
NCBI-ProteinID: XP_056891933
LinkDB
Position
6:7539528..7548496
AA seq 687 aa
MILSWMCREYLLVILLQIVLICSAQRGPVGPRGPPGPPGTAGVPGVDGIDGDRGEDSTVN
GGRGPDGESGRDGAPGAPGIPGADGPVGPPGEPGITGLKGSKGESGLRGPSGEPGVGTDG
LDGIPGTDGLPGELGKVGPPGARGKRGPVGLPGAVGLRGPPGVYQGEELCPNACSSGRTG
HPGLPGMKGHKGVKGESGEPGRQGHKGEEGEQGPPGVVGAQGLPGPGGVRGFPGIMGSKG
DRGPRGTPGDIGPRGIQGVPGDMGQRGPTGEPGIPGAQGDRGPPGIRGAPGAKGDPGLPG
PDGREGIPGLPGSKGLPGKSGAPGDAGSQGLPGLPGAYGQKGISGVKGVAGDPGVVGLDG
SPGKQGERGEQGEVGPVGPRGGPGSRGPRGHDGPPGAPGARGSKGDPGLPGLPGPAGYHG
QKGDRGAVGLDGPKGDQGPAGAEGTAGDRGDVGDEGELGEKGSTGPPGETGNKGPEGSRG
QQGKEGKLGQPGPRGMQGDMGVPGLPGRQGPPGKTPTDTHIKQVCMRVMQEQLAQLAASL
SRPESGIAGLPGPPGPPGPPGPSGENGFPGHVGSRGLPGLKGPPGVLGRKGPKGDQGDKG
DRGPTERGPKGEPGAPGLPGQPGRVAYGKDGRDGERGPRGVDGTVGVPGPPGPPGLNAYC
ESAQCVLPMVASPVSAKDSSMKGPSEM
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgattctctcctggatgtgccgagagtatttgctggtgattttactccagatcgtgctg
atttgctcggctcagagaggcccagtcggtcctagaggccccccaggcccaccggggact
gctggtgtgccgggggtggacggcattgatggcgacagaggagaagattccactgtaaac
ggaggacgaggtcctgatggtgagagcggcagagatggagctccgggagccccgggaatt
ccaggggcggacggcccagttggaccccctggggagcctggaataactggcctcaaagga
tccaaaggagagtctgggctgcggggaccttctggagagcctggtgttggaactgacggc
ctggatggaattcctggtacagacggccttccgggtgaactgggaaaagtcggccccccg
ggggccagaggaaagaggggcccagtgggtcttcctggtgctgttgggctacggggtcct
cctggtgtgtatcaaggcgaggaactgtgtccgaatgcttgttcctctggacggactgga
catcctggtctccctggcatgaagggtcacaaaggggttaaaggtgaatcaggtgaacca
ggaagacaaggacacaagggagaggagggtgaacaagggccaccgggtgtagtcggagct
caaggattaccaggtccaggtggagtgagaggcttcccaggaatcatgggctccaaagga
gacaggggaccccgaggaacacctggtgatatcggacctcgtggcatccagggggtccca
ggtgacatgggtcagaggggacctacaggtgagccggggataccaggagcccagggagat
cgaggccctcctgggatcagaggagcaccaggagctaaaggagaccctggcctccctggt
ccagacggtcgtgaaggaattcctgggctgcctggctccaagggtcttcctggtaaaagt
ggggctccaggtgatgctggttcacagggacttcctggtctgccaggggcttatggacag
aagggcatcagcggtgtaaagggagtggcaggggatccaggtgtcgttgggctagatgga
tctccaggcaaacagggtgaacgtggtgaacagggagaggtgggaccagtgggacccaga
ggaggaccagggagccgtggaccaagagggcacgatgggcctccaggggcaccgggagcc
cggggaagcaaaggcgatccgggccttcctggactgcctggtcctgctgggtaccatggg
cagaaaggcgacaggggtgccgttggccttgatggtccaaagggagaccagggacctgcg
ggtgcagaaggaacagcaggagatcgaggcgacgtgggtgatgaaggagagctgggcgag
aagggatcgacaggcccaccaggggagacagggaataaagggccagagggcagtcgaggg
cagcaaggcaaagagggcaagttgggccaaccaggcccacggggcatgcagggggacatg
ggtgtcccgggcctgccagggcggcagggaccaccgggaaaaacaccaactgatacacac
atcaaacaggtctgcatgagggtaatgcaagagcagctggcccagctagcagccagcctc
agcaggcctgaatcaggtatcgctggcctgcccggccccccgggcccacctggccctcca
ggaccctctggagagaatggtttccctggccatgttggatcacgaggacttcctggtctg
aagggtccacctggggtactgggtcgcaaaggacccaaaggcgatcagggtgataaaggg
gaccgaggacctacagagagaggacctaaaggagagcctggagccccgggtctaccaggt
caacccggtcgagttgcttacggcaaagacggacgtgatggagagcggggaccccgtgga
gtcgacggtacggtcggcgttcctgggccccctggcccccccggcctgaacgcttactgt
gagtcagcacagtgcgttctgccaatggtggcgtcgccggtgtcagccaaagactccagc
atgaagggccccagtgagatgtga

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