Takifugu flavidus (sansaifugu): 130527627
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Entry
130527627 CDS
T09160
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130527627
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130527627
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130527627
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130527627
NCBI-ProteinID:
XP_056892282
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All DBs
Position
6:complement(12177293..12181277)
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AA seq
427 aa
AA seq
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MAETDVDNELLDYEEDEEPQGAPESGTPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVSVFFGGLTIKKDEEVLKKNCPHIIVGTPGRIRALIL
QKSLSLKNIKHFVLDECDKMLEQLDMRGDVQEIFRMTPHEKQVMMFSATLSKEVRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKTVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaccgacgtcgacaatgagcttctggattatgaagaagatgaggagccccag
ggagcaccagagagtgggaccccagccaacaagaaggaggttaaagggtcctacgtatcc
attcacagttctgggttcagagactttctcctgaaaccagagttgctccgggccattgtt
gactgcggttttgagcacccttcagaagtgcaacatgagtgtattccccaagctatactg
ggcatggacatcctttgccaggccaagtcgggtatggggaagacggcagtgtttgtgctg
gcaaccctgcagcagattgaaccagtggatggtcaggtctctgtccttgtaatgtgccac
actcgagagctggccttccagattagcaaagagtatgagcgtttctccaagtacatgccc
actgtcaaggtgtctgtgttctttggtggcctgaccatcaagaaggatgaggaggtcctg
aaaaagaactgccctcacattattgtcggaactcccgggcgtattcgtgctcttatcctc
cagaagagcctcagcttgaagaacatcaaacactttgttcttgatgagtgcgataagatg
ctggagcaacttgacatgcgaggagacgtccaggaaattttccgaatgacaccccacgag
aagcaggtgatgatgttcagtgcaactctaagcaaggaagtccgtccggtctgccgcaag
ttcatgcaagaccccatggaggtgtttgttgatgatgaaaccaagctaactctacatggg
ctgcagcagtattactgcaagttgaaggacagcgagaaaaaccgaaagctttttgacctg
cttgatgttcttgagttcaatcaggtggtgatctttgtgaaaacagtgcagcgttgtgtc
gctctgtcccagctgctggtggagcagaacttccctgccattgcaattcatagaggcatg
gcacaggaggagaggttatcccggtaccagcagtttaaggacttccagcggcggatcctt
gtggccaccaatctgtttggtcgaggaatggacatcgagcgtgtcaatattgtgttcaac
tacgacatgccagaggattctgacacataccttcacagagtggcccgtgctggaagattc
gggaccaaaggcttggccatcacctttgtttccgatgagaacgacgcaaagatcttaaat
gatgttcaggaccgcttcgaagtcaacgtcgcggagctgccagaggagattgatatctcc
tcttacattgaacagtccagatga
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