Takifugu flavidus (sansaifugu): 130527642
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Entry
130527642 CDS
T09160
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tfs00536
]
130527642 (slit2)
Glycosaminoglycan binding proteins [BR:
tfs00536
]
Heparan sulfate / Heparin
Axon guidance molecules
130527642 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
LRR_5
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
LRRCT
hEGF
EGF_TEN
LRR_1
LRR_14
EGF_DL_JAG
Laminin_G_3
JAG1-like_EGF2
EGF_3
EGF_Teneurin
EGF_C8A_B_C6
LRR_EndoS
EGF_CA
Motif
Other DBs
NCBI-GeneID:
130527642
NCBI-ProteinID:
XP_056892310
LinkDB
All DBs
Position
6:9849168..9913698
Genome browser
AA seq
1560 aa
AA seq
DB search
MVAFLCPVGPGRSTANALRLLVSLLLLVLSSGVYGQPCPTQCSCTGTTVDCHGQGLRSVP
RNIPRNTERLDLNANNLTKITKADFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRL
NRNNLAVFPELLFLGTTKLSRLDLSENQIQGVPRKAFRGAVEIKNLQLDYNHITCIEDGA
FRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRL
GLYTQCMAPPHLRGHNVAEVQKKEFVCTGHQSSSSSSACSVLQCPESCTCSNNIVDCRGK
GLTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRS
LNSLVLYGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQ
TIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIG
QIKSKKFRCSGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAE
LRLNNNEFTVLEATGIFKKLPHLRKINLSNNRITDIEEGTFEGASGVNELILTSNRLENI
HHRMLKGLGGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITSINPGAFDTLHSLS
TLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQNPYFLKEIPIQDVAVQDFACDDGND
ENSCSPVLRCPAECSCLDTVVRCSNKGLSALPKGLPKETTELYLDGNHFTQVPVELSNYK
HLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLLSLHGNDI
SLIPEGAFKDLSSLSHLALGANPLHCDCHMQWLSDWVKSGYKEPGIARCAGPGDMADKLL
LTTPSKKFTCTGPVDINIQAKCEPCLSNPCKNDGTCSNDPVNYYRCICPYGFKGQNCEEP
IHACISNPCQNGGTCHLKEGESSNFWCVCPEGFEGDTCEINIDDCEDNDCENNSTCVDGI
NNYTCMCSPEYTGELCEEKLDFCAPELNPCQHDSKCILTPQGYKCECPPGYVGEHCELDY
NDCEDNKCQSGAQCIDALNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDNHECRNGAQCV
VMGPDPRCQCLHGYEGEHCETLVSVNFMNRGSYLQLPSSLLSPETNISLQIATDEDSGVL
LYKGDNDHIAMELYRGRLRVSYDTGSYPPSAIYSVETVNDGSFHAVELVVSGQTLSLSID
GGPPKSINSLSRHSTLNLDSPLYLGGMPERASALGGLSSLQHSAGGRNGTGFHGCLRNLY
INGKLQDLAAGLRPGTSGSTSAQSSSRQWLGQGLEPGCQPCQRGSCLQGDCHPTGHRGFT
CTCHPGWTGTLCDQQVNNPCDGNKCVHGTCLPINSYSYSCRCQPGHSGVLCDEQDQDGTN
PCSLSHCKHGKCRVSGLGKAYCECNSGYTGEACEREVACRGERVRDFYQRQQGYAACQTE
EKVSRLECRGSCLGGAEGQGTCCTPLRSKRRKYTFQCTDGSSFVQEVEKVVKCGCTKCSS
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atggtggcatttctgtgccccgttggccctggtcgctccactgcaaatgcgctccggctt
ctggtctctctgctgttactggtcctttcgagcggagtatacggccagccctgtccgacc
cagtgctcctgtaccggaactacagtggactgtcacggccaagggctccgcagcgtgccc
aggaacattccccgcaacaccgaaagactggacctgaacgcaaacaacctcactaaaatc
accaaggcggacttcgcaggactgaggcatctgcgagtgctgcagcttatggagaataaa
atcaccaccatcgagaggggagcgttccaggacttgaaggaactggaaagactgcgcctg
aatcggaataatctggctgtcttccctgagctacttttcctgggaacgacaaaactctcg
aggcttgatctcagtgaaaaccagatccaaggagtgccaagaaaagcattcagaggagct
gtggagatcaagaacctccagttggactacaaccacatcacctgcatcgaggatggggca
ttccgggcgctacgcgacctggaagtgctcaccctcaacaacaacaacatcagccgactg
tccgtggccagtttcaaccacatgcccaagctcaggaccttccgcctgcactccaacaac
ctgcagtgtgactgtcacgtagcctggctgtcagaatggttgcgacagcgcccccgcctg
ggtctttacactcagtgcatggccccaccgcatctgaggggccacaacgtggctgaggtg
cagaagaaggagtttgtctgcacaggtcaccagtcctcctcatcatcttctgcctgcagc
gttttacagtgtccagagtcctgcacctgcagtaacaacatagtggactgcagaggaaaa
ggactgacagaaatccccaccaacctgccagaaaccattactgagatacgactggagcaa
aacgccatcaaggtgatcccagctggggccttttctccttataagaagctgcgtaggata
gacttgagtaacaaccagatatcggagttagcctcggatgcctttcaaggtctgcgctcc
ctcaactctctggtactatacgggaacaaaatcacagaaatttccaaaggactctttgag
ggattattttctctgcagctgctgttattgaatgctaataagatagcgtgtctccgcgtg
gatgccttccaggacctccacaacctcaacctgctctcgctgtatgacaacaagctgcag
accatcgccaagggaaccttctcctcattaagagccatccaaacgcttcatttagcccag
aacccatttatctgtgactgccatctgaagtggctggccgactacctgcaggacaatccc
attgagaccagcggtgcccgctgcaccagcccccgacggcttgccaacaaacgaatcgga
caaatcaagagcaagaagttccgctgctcaggtaccgaggattaccggagcaagctaggc
ggcgactgtttcgcagacttggcgtgcccagagaagtgtcgctgtgagggcacaacagtc
gactgctccaaccagaaactcaccaaaatacccgatcacatccctcagtacacagcagaa
ctgcgcctgaacaacaatgaattcactgtgctggaagcaacaggcatctttaaaaagttg
cctcatctcaggaagatcaacctgagtaacaaccgcatcactgacatcgaggaggggaca
tttgaaggagcttcaggggtcaacgagttaatcctgacctccaacagactggagaacata
catcaccgcatgctgaaaggactcggtggcctccgcacgctcatgctgaggagcaacagg
atcagctgcgtgagcaacagcagctttgtgggcttgagctcagtgcgcctgctgtcgctc
tacgacaaccagatcacctccatcaaccccggagcgtttgacactctgcactcactgtcc
acactcaaccttctggccaaccccttcaactgtaactgtcacctggcctggctcggtgat
tggctgaggaggaagcgcatcgtcacgggtaaccctcgctgccagaatccctatttcttg
aaagagattcccatccaggacgttgctgtccaggattttgcctgcgatgatggaaacgac
gagaacagctgctccccggtgttgcgttgcccagccgagtgttcatgtctggacacagtt
gtgcgctgcagcaacaagggcctatctgcgctacccaaaggccttcccaaagaaaccaca
gagttgtatctcgatggtaaccacttcacgcaggttcctgtggaactgtccaactacaaa
cacttgactttgatcgacttaagtaacaaccagatcagcacgttgtccaaccacagcctc
agtaacatgtccgagctgcttaccctaatcctgagctacaaccgtttgcggtgtattcct
gtaagggccttcgatggactcaagtcgctgcgtttgttgtctctccatggtaacgacata
tcactgataccagaaggagccttcaaagatctgtcctcactgtcccacctcgctctgggg
gccaaccctttgcactgcgactgccacatgcagtggttgtccgactgggtgaagagcggc
tacaaggagccgggcatcgcccgttgtgccgggcctggcgacatggccgacaagttactt
ctcaccacgccttccaagaagttcacctgcacaggaccagtggatataaatatccaggca
aagtgtgagccgtgcctctccaacccctgtaagaatgatggcacctgctctaatgaccct
gtgaactattaccgttgcatctgcccctatggatttaaggggcagaattgtgaggagcca
atccatgcctgcatcagcaacccctgtcagaatggaggcacctgccatctgaaagaaggc
gaaagtagcaacttctggtgtgtgtgtccagaaggctttgaaggagacacatgtgagatc
aacatcgacgactgtgaggataacgactgtgagaacaactccacctgcgtggatggaatc
aataactacacatgcatgtgctcacctgagtacacaggggagctgtgtgaagagaagctg
gatttctgtgctcctgagctgaacccatgtcagcatgactcaaagtgcattctaaccccc
cagggatacaaatgtgagtgtcctccaggatacgttggcgagcactgtgagctggattat
aacgactgtgaagacaacaaatgtcagagtggagctcagtgcattgatgccctgaatgga
tacacctgcgtctgtccagaaggatacagtggtttattctgcgagttttctccccccatg
gtccttcctcgcaccagcccctgtgacaaccacgagtgccgtaacggtgctcagtgtgtt
gtaatgggaccagaccccagatgccagtgtctccatggttacgagggcgagcactgcgag
acgctcgtcagtgtcaacttcatgaaccgtggctcttacctacagcttccttccagtctc
ttgtctccagagacaaacatcagtctccagattgccactgatgaagacagcggagtgttg
ctgtataaaggcgacaatgatcacattgccatggagctgtacaggggacgcctcagggtc
agctacgatactggctcttaccccccctctgccatatacagtgtggagacagtgaacgac
ggcagctttcatgctgtggagttggtggtgtctggccagactttgtctctgtccattgat
ggtgggcctccgaaatcaatcaactccctcagcaggcattcaactctcaacctggattct
ccactttaccttggaggaatgccagaacgtgcctcagcactggggggtctgtcgtcattg
cagcacagcgcaggaggacgcaacggcactggtttccacggctgcctccgtaacctgtac
atcaatgggaagctccaggacctggcagctggactgaggcccgggacaagtggttctacc
agcgctcaaagcagcagcaggcagtggctgggccaagggcttgagccaggttgccagccc
tgtcagagaggctcctgcctccagggtgactgtcaccccacagggcatcggggcttcacc
tgcacatgccacccaggctggacaggaacactgtgtgaccagcaggtcaacaacccatgt
gatggcaacaagtgtgtccatggcacctgtcttccaatcaactcttactcctactcctgc
cgctgccagccgggtcattctggtgttctgtgtgatgagcaggaccaagatggcactaat
ccctgtagcctctctcactgtaaacatggcaagtgtcgggtgtcaggcctggggaaggca
tactgcgagtgtaacagcggctacaccggcgaggcatgtgaacgagaggtggcctgccga
ggggaacgcgtccgagatttctaccagagacagcaaggctatgcggcgtgccaaaccgag
gagaaggtctcccgcctagagtgtcggggtagctgcctggggggcgcagaaggtcagggc
acttgctgcacccccctccgcagcaaacgcaggaaatacaccttccagtgcactgatggc
tcctctttcgtccaggaagtggagaaagtggtcaaatgtggctgtacaaagtgttcctca
tag
DBGET
integrated database retrieval system
