Takifugu flavidus (sansaifugu): 130527700
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Entry
130527700 CDS
T09160
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130527700 (lrba)
Membrane trafficking [BR:
tfs04131
]
Endosome - Lysosome transport
Others
Others
130527700 (lrba)
Endosome - Golgi transport
130527700 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
130527700 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
WD40
Laminin_G_3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
SUKH_6
WD40_WDHD1_1st
Arm_4
Tti2
Motif
Other DBs
NCBI-GeneID:
130527700
NCBI-ProteinID:
XP_056892380
LinkDB
All DBs
Position
6:complement(4004616..4130868)
Genome browser
AA seq
2855 aa
AA seq
DB search
MEAPGEGKDGGSGAMALNPGIPIRGIRMKFAVLAGLVEVGEVSNRDIVETAFNLLVGGQF
DLEMNFIIQEPESIGCMVELLDKCESTCQAEVWSIFTAILKKSVRNLQACTEVGLIQQVL
DRISTTDSMIADLLVDMLGVLASYSITVKELKIFFSKLQGEKGQWPRHAVKLLSVLKYMA
HRTGPDSFFSFTGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVDKDKPYLYCFR
TSKGLGYSAHFVGGCLIVTSLKSKAKGFQHCVKYDFKPQKWYMVTLVHVYNRWKNSEISC
YVNGELASFGDIAWFVNTSDTFDKCFLGSSETADTNRVFCGQMGAVYLFGEALSAAQILA
IYQLGPGYQGTFKYKAESDLLFAEHHKTLLYDGKLSSSIAFTYNPRATDAQLCLESSPKD
NASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYRQPSSQELDTSVC
CTLLSFVMELLKNSVAMQEQVLACKGFLVIGHTLEKSSKVHVTRSVLDIVLTFSRYLSNL
QNGIMLLKQLCDHILFNPAIWIHAPAKVQLTLYTYLATEFIGSVTIYNTIRRVSTVLQVM
HTLKFYYWVVNPQDRSGVLPKGLDGPRPNQKEILSLRAFLLLFVKQLIMKDHGVKDDELQ
SILNYLLTMHEDDNLMDVLQLLVALMSEHPGSMIQAFDQRNGIRVIFKLLASKSEGIRVQ
ALKVMGYFLKHMPAKRKSEVMLSFGLFSLLTERLMLHNSQCTMTTYNVLFEILTEQICTQ
VIHKQHPDPDSTVKILNPQILKVIAILLKNSAQSPETMEVRRVFLSDMIKLFNNSKENRR
SLLQCSVWQEWMLSLCFINPRNSEEQKITEMVYAVFRILLYHAIKYEWGGWRVWVDTLSI
THSKVTFEQHKENLSRMFRQYQRQESAGSVRTISGASQSMETMESVSSSPAEESAPSTVI
ELTVDSPSSPTGASSPTEPSDEAKPASVTVSNILEGAGDYEQKLDENNEPTVTQEKEEQI
KEPKGSTEERRDHPQTPVRDGEVTEDGGAVKMADVSTMEVPVTDKRDESEPSNSEPNSMN
EADIEAPPSSEQEGRSEMSSEATPCLENSMLGGASVFNEDLVDVSSVSDQVQPSDNDDSQ
EESSDVTGPAGEEEPVKEEEAQNEHDVGEEVKDEKVGTDGNTEGTTPAGVTETSKDEETL
EQSCTTPATQTSETTTPPAVQEVEPTSASDSDKQPSEVAAEEPTTSAHVDSSTAASSSGK
TKEIKIARLDVSNVASDTERLELKETETNQTAGGGGGTSGPRRDGSMSGPRSTMFRIPEF
RWSHMHQRLLTDLLFSVETEIQMWRSHSTKTILDFVNSSENVVFVHNSIHLISQVVDNLI
MACGGILPLLSAATSSTHELENIEPSQGLTVEASVTFLQRLINLVDVLIFASSLNFTEIE
AEKNMSSGGVLRQCLRLVCAMAVRNCLECQQAQFKQGKDGTAHTCTALPGNVLGASKSAS
AQSPVDAVTGGMSPVRDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMV
SKYRDILEPHNDKKHPQRSQSARSTDSSTISGEVENGVSIRRYDSGIGDDHTSTAASEGD
LSSTGVTHGPDAISEALSTLSSEVRPSLPADSKGKNVKDILRSLVSPPSDDVTVDPNLLP
PSFLGSMGDRTRESFRSFDRSVIVAPKKSALAPSISASPAAPAATATAASVSSGTPMDSV
AVVSSGDAAQSTSAEAAAAGCQVPASASLPSVPPLSPVTQNTAPNMSISERLEHALEKAA
PLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQK
NAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFILSRQRTEDIHKHAEFESACAQYTADK
RDEERMCDHLIRAAKYRDHVTAMQLIQKIVNILTDKHGAWGSSPTSSRPREFWRLDYWED
DLRRRRRFIRNPFGSTHSEATLKAAADHVAEISVSEEDILRGKQPIRGQALAHQNSESET
LLDGDDDTLSSLDEKDLDNVTGPVNLSTNAQLVAPAAVLKGTLSVTASELYFEVDEDDPG
FKAIDPKILAYTEGLHGKWLFTEIRAIFSRRYLLQNTAVEIFMANRMAVMFNFPDAATVK
KVVHSLPRVGVGTNFGLPQTRRISLATPKQLFKAANMTQRWQRREITNFEYLIFVNTIAG
RTYNDLNQYPVFPWVITNYDSEELDLTLPSNFRDLSKPIGALNPKRAAFFSDRFESWEDD
QVPKFHYGTHYSTSSFTLMWLLRMEPFTTFFLNFQGGKFDHADRAFSSVSRAWRNCQRDT
SDVKELIPEFYYLPEMFVNANSYSLGVMEDGTVVSDVELPPWAKSPEEFVRINRLALESE
FVSCQLHQWIDLIFGYKQQGPEAARALNVFYYLTYEGAVNLSSIGDPMLREAVESQIRSF
GQTPCQLLIEPHPPRSSAMQVYLLLQTPLMFTEQMQQDVIMVLKFPSNSPVTHIAANTQP
GLTVPAIITVTANRLFAVNKWHGLAGHQSSVAQDQQYQLPVEIDPLIANNVGNHRRQISD
LLDQSIQISSQCFVVTADNRFILLCGFWDKSFRVYSTDSGKLTQIVFGHRDVVSCLARSE
SYIGGDCYILSGSRDATLLLWYWNGKHNSIGESPGREFTTPRAILTGHDCEVTCASVCAE
LGLVLSGCKEGPCLIHSMNGDLLRTLEAPEDCLRPRLIQSSTEGNCIIYYDKGHFCLFSV
NGKLLGHVEVEDSIKAMFLSRDGQYLLMGGDGGVVSVWQVHDLKQLFTYPGCDAGIRSMA
MSHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8568 nt
NT seq
+upstream
nt +downstream
nt
atggaggctccaggagagggaaaggacgggggatcgggcgccatggcgctcaaccccgga
atacccatcaggggaatcaggatgaaattcgccgttcttgctggtctggtggaagttggg
gaagtttccaacagggacatcgtggagacggcgttcaacctgctggttggaggccagttt
gacctggagatgaacttcatcatccaggagccagagagcatcgggtgcatggtggagctg
ctggacaagtgcgagtccacctgtcaggcggaagtctggagcatcttcaccgccatcctc
aagaagagcgtccgcaacctgcaggcgtgcaccgaagtggggctcatccagcaagtgctg
gaccgcatctccacaactgacagcatgattgcagacctgctggtggacatgttgggtgtg
ctggccagctacagcatcactgtaaaagagctgaagatcttcttcagcaagctgcagggg
gagaagggccaatggccccgtcacgccgtgaagctgctgtcagttctgaagtacatggct
cacaggaccggccccgactcctttttcagcttcacagggaaaaacgcagccgctatagct
ttgccccccattgctaaatggccgtaccagaatgggtttacattccacacatggcttcgg
atggatcctctcaacaatatcaacgtagacaaagacaagccttatctctactgcttccgc
accagtaaaggcctgggttattctgctcacttcgtgggcggctgtttgatagtgacctca
ttaaaatcgaaggcgaaaggattccagcactgtgtgaagtacgacttcaaaccccagaag
tggtacatggtgactctcgtgcacgtctacaaccgctggaaaaacagtgaaattagctgc
tatgtaaatggtgaactggcttcttttggagacatcgcctggtttgtcaacaccagtgac
acgtttgacaagtgtttcctgggatcgtcggagacggcggacaccaaccgggtgttctgc
ggacagatgggggcagtttacctgttcggggaggctctcagcgccgctcagatcttggct
atctaccagctgggtccaggctaccagggcacgttcaagtacaaggcagagagtgacctg
ctgtttgcagagcatcacaagaccttactttacgatggcaaactgtcctccagcatcgcc
ttcacttacaaccctcgtgctacagacgcccagctctgccttgagtcctccccaaaggac
aacgcctccattttcgtccactcgcctcatgcactcatgctgcaggacgtgaaggccgtg
gtgactcactcagtccagagcggcatacactccatcggaggcgtgcaggttctctttcct
ctgtttgcacagctggattatcgccagccttccagtcaggagctggacacctctgtctgc
tgcactttgctctcgtttgtgatggagctcttgaagaactcggtggctatgcaagagcag
gtcctggcctgcaaaggatttctggtcattggccacactttggagaagtcttccaaggta
cacgtgacacggtctgtcctggacattgtgctgaccttttccagataccttagcaactta
cagaacggtatcatgctgctcaaacagctgtgtgaccacatcctgttcaaccctgccatt
tggatccatgcaccagccaaggtgcagctgacgctgtacacatacctggcaacagagttc
attggctcagtgaccatctacaacacaattcggagggtgagcaccgtcctgcaggtcatg
cacacgctcaagttctactactgggtggttaacccccaggaccgcagtggagtcctgccc
aaaggcctcgatggtcccaggccaaaccagaaggagatactttctttgcgagcatttctg
ttgttgtttgtcaaacagctcataatgaaggatcacggtgtgaaggatgatgagctacag
agcatcctcaactacctcctaaccatgcatgaggatgacaacctcatggatgtgctgcag
ttgttggtggctctgatgtctgaacatcctggttccatgatccaggcttttgaccagcgc
aatgggattcgtgtaattttcaagcttttggcctcaaaaagtgaaggaatacgagtgcaa
gcgctgaaagtaatgggatattttctgaaacacatgccagcaaagaggaaatctgaggtc
atgttgagttttggactcttctccctgctgactgaacgcctgatgctccacaacagccag
tgcaccatgaccacatacaacgtgctcttcgagatcctcacggagcagatctgcactcaa
gtgatccataaacagcatccggaccccgactccaccgtgaagattctcaacccacaaatc
ctgaaggtcatagctattctgctgaagaactccgcccagtcgccagagaccatggaggtg
cgcagggtcttcctgtcagacatgatcaaactgttcaacaacagcaaagagaaccgcagg
agcttgctgcagtgctccgtgtggcaggagtggatgctctctctgtgcttcatcaaccca
cgaaacagcgaggagcagaaaatcacagagatggtgtacgccgtcttccgcatcctgctc
taccacgctatcaaatatgagtggggcggctggcgcgtctgggtggacaccttgtccatc
acgcactccaaggtaacctttgagcaacacaaagagaatctgtcccgcatgttccgtcag
taccagcgacaggaatctgcaggctcggtccgaactatttctggtgccagccaaagcatg
gagaccatggaaagtgtaagcagttccccggccgaggagtcggctccttctactgtcatt
gaactgacggtggactcgccgtccagtccaaccggcgcctccagcccaacggaaccttct
gatgaagccaagcctgcatccgtcaccgtgtccaacatcctggaaggcgcgggagattac
gagcaaaagctggatgagaataatgaacctactgtgacccaagagaaagaggagcagatt
aaagagcccaaggggtctactgaagagaggagagatcatccacaaacaccggttcgtgat
ggggaggtaacggaggatggcggtgcagtgaaaatggctgatgtgtctacaatggaggta
ccggttacggacaagagagatgagagtgaaccaagcaattctgaaccgaactccatgaat
gaagctgatattgaagctcctccgagttcagaacaagaagggaggtcagaaatgtcttcc
gaggccacgccgtgcctggaaaacagcatgctgggaggggcctccgtcttcaacgaagac
ttggtagatgtctcgtccgttagtgaccaggtccagcccagtgacaatgatgatagccaa
gaggagtcatctgacgtgaccggtccagccggagaagaagagccagtgaaggaggaggaa
gcccaaaacgaacacgatgtaggtgaagaggtgaaagatgaaaaggttggaacagatgga
aataccgaggggacgactccagctggtgtgacggaaacatccaaggatgaagaaacactg
gagcaatcttgcaccaccccggcaacccagacctcagaaaccaccacaccccctgcagtc
caggaggtagagccaacatcagcctccgactccgacaaacagccttcagaggtcgccgct
gaggagccaaccacatcggcgcatgtggacagtagcactgccgcctccagctctggcaaa
accaaggagatcaaaatcgccagattggacgtgtccaatgtggcctcagatacggagaga
cttgaattaaaggagacggaaactaaccaaacagcaggaggtggaggaggaacatcaggt
ccaaggagagatgggagcatgtcaggccctcgatccaccatgtttcgcatcccagagttc
cgttggtcccacatgcaccagcgcctcctcactgacctgctcttctctgtcgaaacagaa
atccagatgtggaggagtcactccacaaagaccattctggactttgtgaacagcagcgag
aacgttgtgtttgtccacaacagcatacacctcatctctcaggtggtggataacctcatc
atggcctgtggaggcattttacccctgctctctgctgccacctcttctacgcatgaactg
gagaacatcgaaccctctcaaggtttgacagtggaagcctccgtcaccttcttacagcgc
ctcatcaacctggtggacgttctcatttttgccagctccctcaacttcacggagatagaa
gcagagaaaaacatgtcgtctggtggcgtccttcggcagtgtcttcgtcttgtctgtgct
atggcagtgagaaactgtctggagtgtcagcaagcccagttcaagcagggcaaagatggg
acagcacacacttgcacagctctgcccggaaatgtactcggagcatccaaatctgcatcc
gcacagagtccagttgacgcagtgacaggtggaatgtctccagtgagggatttggacagg
cttcttcaggatatggacatcaaccgcctcagggctgttgtcttcagagatattgaggac
agtaagcaggcccagtttctggctcttgctgtcgtttacttcatctctgtcctcatggtg
tccaagtaccgcgacatcctggagccccacaatgacaagaagcatcctcagcgctcacag
tcagccaggagcacagatagcagcaccatttccggtgaggtagagaacggcgtgtccatc
cgacggtatgactctggcatcggcgatgatcacacctcaaccgccgccagcgaaggagat
ctgtcatccaccggcgtgactcacggcccagacgccatctcggaagccctgtccacttta
tcttctgaggtcagaccttctctacctgctgactcaaaggggaagaatgtgaaggacatc
cttcgcagcctcgtgagccctccgtccgatgacgtaacggtggatccgaatctgctgcca
ccgtcttttctggggagtatgggagacaggaccagggaatccttccgctcattcgacaga
agcgtcattgttgcaccaaagaaaagcgccctcgcgccatccatcagcgcctcccctgcg
gccccagcagccaccgccaccgccgcctccgtgtcgagtggaacgccgatggacagcgtg
gctgtggtatcctctggcgacgctgcccagagcacctcagcagaagctgcagctgcaggc
tgccaggttccagccagtgcgagcctgccatctgtccccccactctcccctgtgacccag
aacacagcccccaatatgagcatctcggaacgcctggagcatgctctggagaaggcagcg
cctctacttagagagatctttgtggattttgcccccttcctctctcgtaccctgctgggc
agccatggacaagagctccttattgagggcaccagcctggtgtgtatgaagtccagcagc
tcagtggtggagctcgtcatgctgctgtgttcacaggaatggcagaactccatccagaag
aatgcaggtctagcctttatcgagctggtcaacgaaggcaggctgctgagtcacaccatg
aaggaccacctggtccgtgtcgctaatgaagccgagttcatcctgagtcgacagaggacc
gaagacatccataaacatgcagagtttgagtccgcatgtgcacagtatacggcggacaaa
cgagacgaggagagaatgtgcgaccacctgatccgggcagccaagtaccgcgaccatgtg
acggccatgcagctcatccagaagatcgtcaacatcctgacggacaaacatggcgcctgg
ggaagctcccccacaagcagccggccgagggagttctggcgcctggactactgggaagac
gatttaaggcgtcgacgtcgcttcatcaggaacccctttggatccactcactcagaggcc
acgctcaaagccgccgcagaccacgtagctgaaatcagcgtgtctgaggaggacatcctc
agaggaaagcagccgatcaggggtcaggctctggcacatcagaactccgagagtgagacg
ttactggacggagacgatgacactctgtcctccttggacgagaaggacctggacaacgta
acaggcccagtcaacctgagcaccaacgcgcagctggtggctccggccgcggtgctgaag
ggaaccctgtccgttaccgcctccgagctctatttcgaggtggatgaagacgatccgggc
ttcaaggccatcgatccaaagattcttgcttatacagaaggtctccatggaaaatggctg
ttcacagagatccgtgccatcttttccagacgatacctgctgcagaacactgctgtggaa
atcttcatggccaacagaatggcagtcatgtttaacttcccagatgcagccacagtcaag
aaagtggtccacagtcttccacgagttggggtggggacgaattttggtcttccgcagacg
agacgaatctctctggctacaccaaagcagcttttcaaggccgcgaacatgacccagcgc
tggcagcggagagagataactaactttgaatacctcatctttgtcaacactatcgctggt
cggacctacaatgacctgaaccagtacccggtcttcccctgggtcatcacgaactatgac
tcagaggaacttgacctcactctacccagcaacttccgagatctgtcaaagcccatcggt
gctctgaatccaaagagagcagctttcttttcggacagatttgagtcttgggaggatgat
caggtgccgaagttccactatgggacccactattccacctccagcttcaccctcatgtgg
ctgctgcgcatggaaccctttaccacatttttcctgaacttccaaggaggaaagtttgac
cacgccgaccgcgccttctcctcggtgtcccgggcctggagaaactgccagagagacacg
tctgatgtcaaggagctgattccagagttctactacctccccgagatgtttgtcaacgcc
aacagttacagcctgggcgtgatggaggatggcacagtggtgtctgatgtggagctgccc
ccctgggccaagagcccggaggagtttgtgcgcataaatcgcctggctctggagagcgag
tttgtgtcctgccagctgcatcaatggatcgacctgatatttggctacaagcagcagggt
cccgaagccgctagagccctcaacgttttctattatctgacatacgaaggcgccgtcaac
ctcagctccatcggggaccccatgctcagagaagcggtggagtctcaaatcaggagcttc
ggacagaccccctgccagctgctcatcgagccacacccacctcgcagctccgccatgcaa
gtgtatcttctcctgcagacgccgctgatgttcacagagcagatgcagcaggacgtcata
atggtactgaagttcccgtccaactctcccgtgactcatattgccgccaacacccagccg
ggcttaacggtgcccgccatcatcaccgttaccgccaaccgccttttcgccgtcaacaag
tggcacggcttagcaggtcatcagagctcagtggcccaagaccagcagtaccagcttcct
gttgaaatcgaccctctcatagccaataacgtgggcaaccatcggcgtcagatctccgac
ctgctggatcagagcattcagatcagctcgcagtgtttcgtcgttacagccgataaccgc
ttcatcctcctgtgtggcttttgggacaagagcttccgggtttactccaccgactcgggc
aaactgacccagattgtgttcgggcaccgtgacgtggtgtcgtgcctggcccgctccgag
tcgtacatcgggggagactgctacatcctgtcgggctccagggacgccaccctcctgctg
tggtactggaacgggaagcacaatagcatcggcgagagtccgggcagagagttcaccaca
ccgcgcgccatcctgactggtcacgactgcgaggtaacctgtgcaagcgtgtgtgcggag
ctgggcctcgtcctcagcggctgcaaagagggtccttgtctgatccactccatgaacggg
gacctgctgcggaccctggaggcccccgaagactgcctgcgtcctcgtctcattcagtcc
tccactgaaggaaactgcatcatctactatgacaagggacacttttgtctcttcagtgtc
aacggcaaattgctgggacacgtggaggtggaggacagcatcaaggccatgtttctcagc
cgtgacggtcagtacctgctcatgggcggagacggaggcgtcgtttccgtctggcaggtc
catgacctcaaacagctcttcacttaccccggctgcgacgcagggatccgctccatggcc
atgtcacatgaccaaaggtgcatcattaccggcatggcctctggaagcatcgtcctcttc
tacaacgacttcaacagatggcaccacgagtaccagaccaggtactga
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integrated database retrieval system
