KEGG   Takifugu flavidus (sansaifugu): 130527790
Entry
130527790         CDS       T09160                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    130527790 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfs03400]
    130527790 (aptx)
Enzymes [BR:tfs01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     130527790 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     130527790 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     130527790 (aptx)
DNA repair and recombination proteins [BR:tfs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     130527790 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     130527790 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT zf-C2H2_jaz zf-C2H2_4 zf-C2H2_6 zf-C2H2 zf-met U3_snoRNA_assoc
Other DBs
NCBI-GeneID: 130527790
NCBI-ProteinID: XP_056892512
LinkDB
Position
6:13195499..13197674
AA seq 356 aa
MPLCWLISVEGNHKPILLPHLQAVVLGRGPETTIKDKKCSREQVELQAECNKGYVKVKQL
GLNPTSIDSLVVGKDSVSKMKPGQQLYIVNQLYPYTVQFKEDLSGSTKRSREAVSETRHN
DKEEPCRKSSKQGEVSVSVSHKEAPKMSVRSNVHFSLLSILLSGLLSEGVGKMLQGSVGH
WNLGLKASMQDPEMQVYKDDKVVVIKDKYPKARYHWLVLPWHSISSLKALRKEHCDLVKH
MQQVAEQMIRQCPDASTLRFRSGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDY
FIESQAVIQMLETDGSISIKEGATELLKLPLRCHVCRKEFSTIPALKQHLNSHFPS
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgccactttgctggcttatcagtgtagaggggaatcataaacctattctactgcctcac
ctacaagcagttgtcctgggtcgaggtccagaaacgactattaaagacaagaaatgttcc
cgagaacaagttgaactgcaagcagagtgcaacaaaggatatgtcaaagtcaaacagctg
ggtttgaaccccacttccatagattctttggtggttggtaaagacagtgtgtccaaaatg
aagcctgggcagcagctttatattgtcaatcagctctacccatacactgtccagttcaag
gaagatctctctggcagcactaaaagatcaagagaggcagtttcagagaccagacacaat
gacaaagaggagccctgtaggaaatcatccaaacagggagaggtttctgtttcagtcagc
cacaaggaagctccaaaaatgagtgtaagaagcaatgtccacttttctctactatctatc
ctcttgtctggactcctgtctgagggtgttggtaaaatgttgcagggaagcgttggacac
tggaacctaggtctgaaggcctcaatgcaagacccagagatgcaggtatacaaggatgat
aaagtagttgtaattaaggacaaatatcctaaagctcgctaccactggctagttctgcca
tggcactccatttccagtttgaaggccttgcgtaaggagcactgtgacctggtgaaacac
atgcagcaggtcgctgagcagatgattcggcagtgtccagatgcaagcacactacgtttc
cgttcagggtaccatgcaatccctagtatgagccatgtacacctccatgtaatcagccaa
gactttgactctccttgtttaaagaacaaaaaacactggaattctttcacgactgattac
ttcattgagtctcaagcggttattcagatgcttgaaacagatggcagcatttccatcaaa
gaaggagccacagagttgttaaaattacctctccggtgtcacgtatgccgcaaagagttt
tccaccataccagcactgaagcaacacctaaattcccactttcccagttag

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