Takifugu flavidus (sansaifugu): 130527915
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Entry
130527915 CDS
T09160
Name
(RefSeq) aly/REF export factor 2-like
KO
K12881
THO complex subunit 4
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03013
Nucleocytoplasmic transport
tfs03015
mRNA surveillance pathway
tfs03040
Spliceosome
tfs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130527915
09122 Translation
03013 Nucleocytoplasmic transport
130527915
03015 mRNA surveillance pathway
130527915
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130527915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130527915
03041 Spliceosome [BR:
tfs03041
]
130527915
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130527915
TREX complex
130527915
Spliceosome [BR:
tfs03041
]
Complex C
Other components
EJC/TREX
130527915
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130527915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
Motif
Other DBs
NCBI-GeneID:
130527915
NCBI-ProteinID:
XP_056892744
LinkDB
All DBs
Position
6:11346847..11349173
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AA seq
248 aa
AA seq
DB search
MADKVNMSLDDIIKLNKKAGSGREGGSSRPTGRSSGRRPSRPARDRRDNFQRERNDRYTP
YTRPSELPDKWQHDLFEEHANGPQSSEAEGSAKLLVSNLDFGVSDSDLRELFAEFGPLKE
ASVHYDRSGRSKGTADVHFELKADALKALKQYNGVPLDGHPMKIQQVTSQVEASSRTSTA
GGFDRTRLGQPKFDWGEKSRSARGGNFRSRGGRGGGGRGRGGGGGRPQLSAEELDAQLDA
YNAKMDTS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggtgaacatgtctctggacgacatcataaaactaaataagaaagcaggc
agtggacgcgaaggtggctcatccagaccaactggaagaagttcaggccgtcggccatcg
aggccggcgcgggatcgtcgtgacaactttcagcgcgaaagaaacgacagatacacccca
tacacccggcccagcgagctaccagacaaatggcagcatgacttgtttgaggagcacgcc
aatggacctcaaagcagtgaagcagaaggcagcgcgaaactcttggtttccaacctggac
tttggtgtgtccgactccgatctcagggaattgtttgcagagttcgggccattaaaagag
gcatccgtccactatgaccggtcaggccgcagtaaaggaacagcggatgttcattttgaa
cttaaggcagatgcactgaaagccttaaagcaatacaatggtgtccctcttgatggccac
ccaatgaaaatccaacaagtgacatcacaagtggaggcaagcagtagaacatccacggca
ggaggatttgacagaaccaggcttgggcagcctaagtttgactggggggaaaaaagccga
agcgcacgtggcgggaactttagaagtcggggaggaagaggaggaggggggagaggaaga
ggaggaggaggaggccgacctcaactgtctgcagaggagctggatgcccagttagatgcc
tacaatgccaaaatggacaccagttag
DBGET
integrated database retrieval system