KEGG   Takifugu flavidus (sansaifugu): 130527915
Entry
130527915         CDS       T09160                                 
Name
(RefSeq) aly/REF export factor 2-like
  KO
K12881  THO complex subunit 4
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs03013  Nucleocytoplasmic transport
tfs03015  mRNA surveillance pathway
tfs03040  Spliceosome
tfs05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130527915
  09122 Translation
   03013 Nucleocytoplasmic transport
    130527915
   03015 mRNA surveillance pathway
    130527915
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    130527915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfs03019]
    130527915
   03041 Spliceosome [BR:tfs03041]
    130527915
Messenger RNA biogenesis [BR:tfs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     130527915
    TREX complex
     130527915
Spliceosome [BR:tfs03041]
 Complex C
  Other components
   EJC/TREX
    130527915
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    130527915
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT
Other DBs
NCBI-GeneID: 130527915
NCBI-ProteinID: XP_056892744
LinkDB
Position
6:11346847..11349173
AA seq 248 aa
MADKVNMSLDDIIKLNKKAGSGREGGSSRPTGRSSGRRPSRPARDRRDNFQRERNDRYTP
YTRPSELPDKWQHDLFEEHANGPQSSEAEGSAKLLVSNLDFGVSDSDLRELFAEFGPLKE
ASVHYDRSGRSKGTADVHFELKADALKALKQYNGVPLDGHPMKIQQVTSQVEASSRTSTA
GGFDRTRLGQPKFDWGEKSRSARGGNFRSRGGRGGGGRGRGGGGGRPQLSAEELDAQLDA
YNAKMDTS
NT seq 747 nt   +upstreamnt  +downstreamnt
atggccgacaaggtgaacatgtctctggacgacatcataaaactaaataagaaagcaggc
agtggacgcgaaggtggctcatccagaccaactggaagaagttcaggccgtcggccatcg
aggccggcgcgggatcgtcgtgacaactttcagcgcgaaagaaacgacagatacacccca
tacacccggcccagcgagctaccagacaaatggcagcatgacttgtttgaggagcacgcc
aatggacctcaaagcagtgaagcagaaggcagcgcgaaactcttggtttccaacctggac
tttggtgtgtccgactccgatctcagggaattgtttgcagagttcgggccattaaaagag
gcatccgtccactatgaccggtcaggccgcagtaaaggaacagcggatgttcattttgaa
cttaaggcagatgcactgaaagccttaaagcaatacaatggtgtccctcttgatggccac
ccaatgaaaatccaacaagtgacatcacaagtggaggcaagcagtagaacatccacggca
ggaggatttgacagaaccaggcttgggcagcctaagtttgactggggggaaaaaagccga
agcgcacgtggcgggaactttagaagtcggggaggaagaggaggaggggggagaggaaga
ggaggaggaggaggccgacctcaactgtctgcagaggagctggatgcccagttagatgcc
tacaatgccaaaatggacaccagttag

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